Basic Information

Insect: Germaria angustata
Gene Symbol: -
Assembly: GCA_963681545.1
Location: OY812998.1:63578017-63588653[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.053 6.7 8.6 0.7 1 23 1656 1679 1656 1679 0.94

2 12 3.2 4e+02 3.0 1.1 1 23 1842 1864 1842 1864 0.93

3 12 0.00075 0.095 14.5 2.8 2 23 1867 1888 1867 1888 0.97

4 12 3.6e-05 0.0046 18.6 0.2 3 23 1896 1916 1894 1916 0.98

5 12 7.4e-06 0.00093 20.8 5.8 2 23 1923 1944 1922 1944 0.97

6 12 8.4 1.1e+03 1.7 0.1 5 23 1957 1975 1956 1975 0.96

7 12 0.036 4.6 9.2 0.1 2 23 2014 2034 2013 2034 0.96

8 12 8.8e-05 0.011 17.4 0.4 1 19 2040 2058 2040 2062 0.95

9 12 5e-06 0.00063 21.3 1.8 1 23 2070 2092 2070 2092 0.99

10 12 0.00018 0.022 16.4 6.5 1 23 2098 2120 2098 2121 0.96

11 12 0.0011 0.13 14.0 6.4 1 23 2126 2148 2126 2148 0.99

12 12 0.0028 0.36 12.6 5.8 1 23 2154 2176 2154 2177 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.053	6.7	8.6	0.7	1	23	1656	1679	1656	1679	0.94
2	12	3.2	4e+02	3.0	1.1	1	23	1842	1864	1842	1864	0.93
3	12	0.00075	0.095	14.5	2.8	2	23	1867	1888	1867	1888	0.97
4	12	3.6e-05	0.0046	18.6	0.2	3	23	1896	1916	1894	1916	0.98
5	12	7.4e-06	0.00093	20.8	5.8	2	23	1923	1944	1922	1944	0.97
6	12	8.4	1.1e+03	1.7	0.1	5	23	1957	1975	1956	1975	0.96
7	12	0.036	4.6	9.2	0.1	2	23	2014	2034	2013	2034	0.96
8	12	8.8e-05	0.011	17.4	0.4	1	19	2040	2058	2040	2062	0.95
9	12	5e-06	0.00063	21.3	1.8	1	23	2070	2092	2070	2092	0.99
10	12	0.00018	0.022	16.4	6.5	1	23	2098	2120	2098	2121	0.96
11	12	0.0011	0.13	14.0	6.4	1	23	2126	2148	2126	2148	0.99
12	12	0.0028	0.36	12.6	5.8	1	23	2154	2176	2154	2177	0.96

Sequence Information

Coding Sequence: atggCGGAAAATGTTCAGTGTCCGGTATGTACTTTATACCTGCATGCAGGTATGAACCTTTCAGACCACTTGGAGACACATCCGAAGGAACAAGTAATTCGCGCCTTAGTACAAATGACTATTTCTGGGACGGGAGTTGGAAATAGTAATAATGGCAATTGTAATACCTTAGctggagaaaataataaatgcaactCTGCCAGAAAACAGTCACCCGATGTGGAAGAGAAATCTTTATCAAGTATCAAAGATAATGAGCTCGATGTGTGTAGCACAGGTAACAGTTGTAGTGCCACTTTAAGCAATTCTGCCAGTAACTGCTCATCAAACCAAAGCGTTAGCAATAGTCAAAATTCTAACATCGCATTAAATGTTTCGGATACAAAAATCGAACGACATAATGAAaatgaacataataaaatttcgaCATCTATTGCTACCGTCAACACCGCAGTTAAAACGGAAACAATTAATACAGTTGCGATGTCCAAAAATGAGTCTGAAAATGAAAATACTAGCCAATGCTTTGCAAAGCAACATTTCAACAcaacaaattcaatttcaaattcaGCAGCGGAAGCAAGTCATTCATATAATCGAAATTCGGTAGAATTGGCAAATGCACCAactaatattcaaaataatttcaacgTCTTTGGTGTTAATACTCGCTATGAACAACAACGGCGCAATTCTGTTAACAATCAAAATCCCTTATCGACCTTACCACACATGCCACCACCGCCCCCTCCAGCATCACCAAATAATCAAAATGCTGGTCAACATCAGGAAAGTGCAGGCCGCGGAATCTCGCCAGCCGGATCTAATGGTACATTTCAAACGTTACAGCCACAACAGTTGCCACCACCACCCCCACCGCATATTGCATCGCCTCATTTAGGCAATTCATCTAGTGGTCCCCGACAAACTCAAATGTACACGGCAAACCAACATCAACAGCCACCGATAAATCTGCATCACACGCAAAGCTTAAAGGTTATATATACACCTAATTTGCCACCACCGCCTCCGCTACAGctaTTTACTTATCAACCACAAACACATTTGCAACAACACCAGAAACCCCCACCGGCCTATGGCACTGCAATTAGTCAAATACGATCTCAGCATAATCAAACtctgcaacagcaacaacaacagcaacaacatttgCAGCAACATCAAacgttacaaaataatttaagaatacAAGTACCAGCTCCACTTCCTATAATTACTACGAAACATACGTATTCGCCAAAAAGCAATGATTTGTTGAATCATTCAGCAACGTATAGGCATGGTCAATCGCAACAACATCAAGAACAATCCAAAGCAGATACATCGCACCGTCAggagcagcaacagcaacagcagcaggaacaacaacaaccacaacaacaacaaacgcaGTGTATCTCGGAAAATGCACAGTCTGCATTAAAGGGAACACCTTCAGTTACAGTACAAAATTCGAATACGATTGTACCTTCATATCCACAAGTTTCTATAGGTCCCTCCGCTGCTTCCGCTTCAATGGCAGCTGTAGCAGCAGCATCAACATTGGGGAGACACACTAACTCACCATTTGCCGCATTATTAGCAGCAGCTGCCGGTGCTCCATCTCCTTCAAATACTTCGTCGGTTTTAAGGTACGCAGAGTCACCAGTAGCTCATTATTTAGAAAGGGAAAATGGTGATTTTATTGTACAAGAAACTCCAAAACATATTGTTGAATGTGTTGAAACAGACAATGGAGAATTTTCTGTCATTGAACGCATATATCAATCACCACCCAGTGTTTTACACATTCATGACGATGATGACGACGAAGATGATGACGATAAATGCAAAGAAGGTCTTGAAAATGAACAACgtgaacaaaataataataagctaAAACAGCGCGATTCTAACGATAGTGGTAGTGAAAAGACTAAAGATGAATGGAATGACAAGCAAAGAAAACCACCCACGAAGGACACCAAAATGAAGAAAGCCAAAAGAAAATCTAACTTCGATGATCAAACCACAGTTGATAATGATGTTGCTGAATTTGTAAGCATTTCTAGCGACAGCGGCGATGAGGAAGAATTTATATCTCAAGAACGGAAGGATGACAACAATATCactgaaaagaataaaaaaaattcatctttCTCCAGTTCTATCCTCTCAATATCACCGATGTCTGTGCAGTCTTCATCTACATCTTCATCCGTATCATCTACATTAGGAATAAAGACAGGCAGCGACCAGCCAATTTCTACATCCACTTCATTACACATTTCCCCTTCTTCCTCTTCTTCTTCAGTTACGGCAAATGCAACTTCCACACAGCCAAATTCTGGAGCAAAcaccaataacaataatattagtcgaaaaaaatcatcaaaaaacACAATCACAGTTTTAAGTGATGTTCAATTGAATTTAAACGAATACTTGGATTTAGTGGGAAATATAATTGCTTCAAGCAAAGTAGCATCACAACGCAAAACATTTTCATCTATTGCTCCCATCCCTCtagtaaaaattgaaaaagaagagCCGATGGATGAATAtataacaacaaacacaacatcGGAGGCAGAAACAACATCAATGAGTTTCGAAACGGCACCACCTTTTAAGGCCAATAAACATGAGACTGAGGAAATAACCCATACCCCTAGTAGTAGTTatactaagcaaacaacaaataataataatgtaattttaacAAGTGAACTAGAAAATGATGATCAGGAAGAGGAAAAACCTCCAATCTTCGTAAATGCTTGCGAAAATGAAACAGCGTCAATGGCTATTTCAAACAATTCCTCTATGACTATAAATTCCAGTCAAGTAACCAGTGTTATACGTATGGCCACAACTAGTCAACATCAGCAACAAGAACAACTACTGAATTCCTTGGAGAGCAATAGAAGCTCTAACGATGTTCAGGACTTATCAAGATCACAACAGAAAACTCCATCTCTGGCGAATTTCAAAACATCGGCCTCTACACCAATGGTTCGTAAAGGTCCAAAGAAATTAGTTATTAAGCCTAAATCTACAAAGACTGATGTTTTGTCAACCTCAACCACTGCAAATGaaccaaatcaaaataaaacaaacaaagaattaCCCAGTACTTCTGCTAACGCTAAACAAACATCCCTTGAAGAggataatttaaatacaacagatataaaaattaaaaatgaaccaATAAGTTCTATAACATACGAAAATATTCATCAACAACATCATTATCAACCACCTTCAAGTTTCAGTATTTTGGAGCAACATCTAAGTTCAAAAGAACCCATTCTagaatttaaagaagaaaaacctTGCATAACAGAAGCTAACTTACCGCCTACGTCAATAATAAAGGAAATGAAGGTAGAAAATAATGTTAATGATGATGCACGTGTATTATATGATTTCGCCAACTCcaagaaaaatcaaaacgaAACGCCACCATCTTTTCCATCTTCCACATCGCTTTTCTCTAGCAAGCAAAATTCCGTGGAGATATCAACATTCGAAGAACCACAAAGTCAACAACTTAATAAAAGCATCGATCATGATAATGAAACTTCATCCTCatcctcatcatcatcaacatatTCTTCACAGTCAGCTATGGACACTACAATGCCACCTGAGGAAAATGAAAGTTCAGCTACTAGTGCTTCGATTGCACCAATTGCTCAAACTCAACATCAAACGAATCAGGTGTATTCTGACTTTCACTTTAATTACCTTTATAATAATAGTGGCAACAATATGACAGCATCTGCTGCTGATCAAACCGGCATTAAGAACAATCAAGAATTTTCCTCATTTTACCAAAATTCTACAAATAATAACACAATGTTGTTGGAAGACTCATCTTCTAGTAAACACTATGCAGACtaccaacaatttcaaaataatcatcACCATTTACAACAGCAACATCAGGTCGCTGCAACGTCACATGATCAATGgtttaataataacaactacCCCACATCGGAACCCAATATTACACCAATTACTTCAAATCATTCAATTTCGAATGTAAATAGCGGTTTATCCGTTGGTGCTAACACCGTTGCGTTAGACAGTAGTGAAGCCGGTAAATATTTAGACTTGGATGCATGTAAACAAGAGCAAAATATTGATGTAAGTGTTGGTGATCGAGTGAGTGTGCCACCACCCCCACCCCCGTCATCCTCAACTTCCTGTTCTTTTACTGGTACAGCTGACAACAGTATGGCTGGTATTTGTTCAACTGCAGTCGCTCTTAATATACACACGGATGAGAAAATGCCAGCTAAAGGTGAAATTTCTGAACAGGAAAGTAATTGTGAAGTCGATAACTCATGGAGCCAACCGATGTATGGCGATATATCAGCTCGTTTCTTTAAAACAACGTTTCCTGGCATATTTCCGCAAGACAACGGTTGGAATCATGAGGAATACTTTACTGTACAGGACTTGAGCGCATCAACCACTGCTCAAGCTACTACTAGTAGATCGAAAAGCTCTGAACAAACTAATAGTAGTAACAACAATAGCAATGGAATCCCGATATTTTCCCAAATCTCAAATGACAATtgtaatattgatataatgccCTCTACATCGGATAAAATTCGTAGGAGACGCAAGCGCAGTTCGCAAGATGGTAAAACATCACAAGCCAACGTTAAGCGCATACAACCAACATCGACTGTAACCTCACAACAAATGTTAATGCAACATCAAAATGAGATAACAGGGGGAATTGAATTTAGTTTTCACCATCACCAGCAGCTTCATTTACAACAGCATTTGCAGCAACCAAGTACGTCTACAGCATTTTTGGCAGGGCCATCAAGTGCAAGTACTGATTTAGCAACTGGCTTTATGATAccacaacagcagcagcaacagcaacatcaaCAGCATCAGCAACAGCAAACGCAACATAAACAACGCACAAAAGTGTATGAATGTGGCCATTGCAATGCCAAATATTCTAAACTAAAAGATCGCAATGCCCACATGATTGATGTTCATAATTACATACGTCAAAATAGAAGACTAGTTTGTCCCACGACCGGGCTTGCAACTCCTTTAAATAATTCCGATATGCAAGATGTTGTTGTACCCACAACAAGTGCAGCTGGCAGTGCTTTAATGCCTGCTTTAGAAAATACCGACTGTATGGATGATTATAAACAGGGCATAGTAAAAGTAGAGAATGAAAATCCCCAACGTGATCTGACTGGCGTAGAAGCAATCAATGCCAATTTAAGTGCTAAAACCGAACTTCTGGAAGACAATAAAGAAGGCCTCACTCTGGTATCCATGAATGCTGCAAATGTCGAAACAATTGTTGAATACGACACTAAACCACCAACCAGTAGTTTACCATTGTCATTAACGACTCCCAGCAGCAAATTAACTACGCTGTATCGCATGCTAGTGTCATTTAATATgacaatattaaaacaaaatcaaaacctTTCAGAATTCGACGAGAACCTTATAAAATCatcaatatttttctgttaCATTTGTCGCCAGAATTTCAATTCAGTAAAATTGTACGATGTTCATTTGACTGAACATCCTGCTGAATGTTTTACATGTGGAAAAAAATTCCAGCGATGGAAAAATTTCTCATTGCACTTAAAGCGACATTTAGGTTGGAAAGAATTCGGTTGTACCGTATGCGATAAGAAATTTGTTGTGCGAAGTGCTCTCGTTGAACATATGCGCATGCACTCTGGACTTTCTCCATTAAAATGTAAAGTTTGTGGTAAACATTTTAAGCGCTATTCAAACTTAACCCAACATCGGAAGCGGcatatgaaacaaattattcGAAGAAAAGAATATGTTTGTTACTGTGGAGAAGTCTTACCATCTAAAGCTCGTTTTTTGTGGCATAAGGAAACCCATGATTCAAAACCGAAATGTTGTCCGCATTGCTGTGACCGCTTTGTTCATGTGAACTCATTGAGACGACATATACGCCTCGCTCATTCGGATAAATTCGATTATACTGAACCGATGGAGTGCCCAATATGCAAGCAAATATTTGCTAAAGCCTCTATGAAAGCTCACATGGCAACGCATTCTACAGAAACGCAATACGATTGTGCTATCTGTAACAAGTCCTTCTCAACgaaatggaatttaaaaatacattcctGGGTACATGCAAATCGAACTGCTAAACCCTTCAAATGTGAGCACTGTCCGAAGGCATTTGTGCGAGAGGTTGACTTTAAGAATCATATGaattctcacaaacaaataaaaccatACACGTGTGAAGTGTGTGGTTGTAAGTTTATACGGAAATATAACTACATGCGCCATAGAAGGGAGCACCATGGAAACAAAAAGTATACCTGTGATCTATGTAAAAAGTCTTTCCATCGCCATTACTATCTCATCGAACACAGGCGCATCCACACAGGCGAACGGCCTTTTCAATGTTCGATATGTGGTAAAAGTTCAACAACTAAAACTAATCATAACAAACACTTAAAAATCCACCATTCTCGTGATCCCTTTACGGTGGAAGTTTAA
Protein Sequence: MAENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGTGVGNSNNGNCNTLAGENNKCNSARKQSPDVEEKSLSSIKDNELDVCSTGNSCSATLSNSASNCSSNQSVSNSQNSNIALNVSDTKIERHNENEHNKISTSIATVNTAVKTETINTVAMSKNESENENTSQCFAKQHFNTTNSISNSAAEASHSYNRNSVELANAPTNIQNNFNVFGVNTRYEQQRRNSVNNQNPLSTLPHMPPPPPPASPNNQNAGQHQESAGRGISPAGSNGTFQTLQPQQLPPPPPPHIASPHLGNSSSGPRQTQMYTANQHQQPPINLHHTQSLKVIYTPNLPPPPPLQLFTYQPQTHLQQHQKPPPAYGTAISQIRSQHNQTLQQQQQQQQHLQQHQTLQNNLRIQVPAPLPIITTKHTYSPKSNDLLNHSATYRHGQSQQHQEQSKADTSHRQEQQQQQQQEQQQPQQQQTQCISENAQSALKGTPSVTVQNSNTIVPSYPQVSIGPSAASASMAAVAAASTLGRHTNSPFAALLAAAAGAPSPSNTSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDDDDEDDDDKCKEGLENEQREQNNNKLKQRDSNDSGSEKTKDEWNDKQRKPPTKDTKMKKAKRKSNFDDQTTVDNDVAEFVSISSDSGDEEEFISQERKDDNNITEKNKKNSSFSSSILSISPMSVQSSSTSSSVSSTLGIKTGSDQPISTSTSLHISPSSSSSSVTANATSTQPNSGANTNNNNISRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVASQRKTFSSIAPIPLVKIEKEEPMDEYITTNTTSEAETTSMSFETAPPFKANKHETEEITHTPSSSYTKQTTNNNNVILTSELENDDQEEEKPPIFVNACENETASMAISNNSSMTINSSQVTSVIRMATTSQHQQQEQLLNSLESNRSSNDVQDLSRSQQKTPSLANFKTSASTPMVRKGPKKLVIKPKSTKTDVLSTSTTANEPNQNKTNKELPSTSANAKQTSLEEDNLNTTDIKIKNEPISSITYENIHQQHHYQPPSSFSILEQHLSSKEPILEFKEEKPCITEANLPPTSIIKEMKVENNVNDDARVLYDFANSKKNQNETPPSFPSSTSLFSSKQNSVEISTFEEPQSQQLNKSIDHDNETSSSSSSSSTYSSQSAMDTTMPPEENESSATSASIAPIAQTQHQTNQVYSDFHFNYLYNNSGNNMTASAADQTGIKNNQEFSSFYQNSTNNNTMLLEDSSSSKHYADYQQFQNNHHHLQQQHQVAATSHDQWFNNNNYPTSEPNITPITSNHSISNVNSGLSVGANTVALDSSEAGKYLDLDACKQEQNIDVSVGDRVSVPPPPPPSSSTSCSFTGTADNSMAGICSTAVALNIHTDEKMPAKGEISEQESNCEVDNSWSQPMYGDISARFFKTTFPGIFPQDNGWNHEEYFTVQDLSASTTAQATTSRSKSSEQTNSSNNNSNGIPIFSQISNDNCNIDIMPSTSDKIRRRRKRSSQDGKTSQANVKRIQPTSTVTSQQMLMQHQNEITGGIEFSFHHHQQLHLQQHLQQPSTSTAFLAGPSSASTDLATGFMIPQQQQQQQHQQHQQQQTQHKQRTKVYECGHCNAKYSKLKDRNAHMIDVHNYIRQNRRLVCPTTGLATPLNNSDMQDVVVPTTSAAGSALMPALENTDCMDDYKQGIVKVENENPQRDLTGVEAINANLSAKTELLEDNKEGLTLVSMNAANVETIVEYDTKPPTSSLPLSLTTPSSKLTTLYRMLVSFNMTILKQNQNLSEFDENLIKSSIFFCYICRQNFNSVKLYDVHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHMKQIIRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTETQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCSICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -