Basic Information

Insect: Germaria angustata
Gene Symbol: -
Assembly: GCA_963681545.1
Location: OY813001.1:88963793-88971302[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0013 0.16 13.7 0.5 1 21 1411 1431 1411 1435 0.92

2 8 0.0037 0.46 12.3 2.3 1 23 2019 2042 2019 2042 0.97

3 8 8.2e-06 0.001 20.6 3.6 3 23 2059 2079 2058 2079 0.98

4 8 3.1e-05 0.0039 18.8 0.7 1 23 2085 2107 2085 2107 0.98

5 8 6.6e-07 8.4e-05 24.1 1.0 1 23 2113 2135 2113 2135 0.99

6 8 0.043 5.5 8.9 2.7 1 23 2141 2163 2141 2163 0.98

7 8 0.0024 0.3 12.9 0.0 2 23 2170 2191 2169 2191 0.96

8 8 0.0018 0.23 13.2 3.1 1 23 2197 2219 2197 2220 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0013	0.16	13.7	0.5	1	21	1411	1431	1411	1435	0.92
2	8	0.0037	0.46	12.3	2.3	1	23	2019	2042	2019	2042	0.97
3	8	8.2e-06	0.001	20.6	3.6	3	23	2059	2079	2058	2079	0.98
4	8	3.1e-05	0.0039	18.8	0.7	1	23	2085	2107	2085	2107	0.98
5	8	6.6e-07	8.4e-05	24.1	1.0	1	23	2113	2135	2113	2135	0.99
6	8	0.043	5.5	8.9	2.7	1	23	2141	2163	2141	2163	0.98
7	8	0.0024	0.3	12.9	0.0	2	23	2170	2191	2169	2191	0.96
8	8	0.0018	0.23	13.2	3.1	1	23	2197	2219	2197	2220	0.96

Sequence Information

Coding Sequence: ATGATGTTGAATAATGAATTCAACCACGGTGATCACCAGTTGTCCCGTATACCAGATCATTTGAAATGTGGCGAAGTTTATACTTGGCAGTGTGCTGACGAATTGTATGCCGTGGAATGTAATTTGTGTGAAGATCATCCTTTGTGCCCTCTTTCAGAATTTCCACAACATATGGAAATATGGCACACGGAATGGGAGGTACTCACACCAACAGACTGTCGAGATAGTGAAGAATTACAATCAACAGAAGATGAAACAGAAAACCAAAGTGATCTGGACAATTACAATAATGATCTTGCATCATTAGGTCATACCGAAGATAGTAGTTTACACATATTTGAATCAGATGATCAGCTACAAAACGAAAGAGCCATCACACGCCACAAACAATATGAAGAAATTTTAGAACCTTTTGAACAGGTATTAATAGAACAAGAAATTGTCATGCAAGGCGTTAATGAAGAAGATTTTTTGGAAGATGAAAGCATACAGACAGCAGAGGCCGATCAATCTCAAATTGaaaccaaacaaaaacaatctATCAATACAAATCAAACATTAAAACATATATTGAATGAAGTGGTAGCATCTGCAAACGAAATAACAGAATGTGGCAGAGAGCTACAATATTCAACAGACCTGAAAGAGAGCGAAGGagatttaaatgtaaataaaacaaaagacttaagaaaaatatttgaaactgAAACCGAGGAAGAAACAAATGAAACGGAAAAACGAACAAGTGAAATTGGGAAAGAAATACGAGTAGGGGAGAGAGAAGCAAGTGAAATGCATGAAGCAATAAGTGGCACGGGACAATCAAAGGAAActgaagttgaaaataaaaattgtgaaaaatttgtgaaacaagttgaatatccttttaaaataaaagataatggtttgactgaaaatagaatatgtgaaataaaatctaataaaattgaaacaacTTCCGTAGACTTCAAAGTCAAAGAAACAAATGATAATGAAGATGAAAGCGATACACAAGTAAATGAAGTAAAACTGAATAATGGGTCGGAAatcaaagaaaatgttaaatcaaCTATCAAATCTACTAAAACAAGAACAATCAAAAATGAAGTGTCTCCAATacgaaataaaacagaattctTCAATTGTGGAATAACAGCAAATGAGAGTGAAACttacaatacaaaatataatgaatttctGAGAAAGTCTACAGAAATGAGAGCAAAAGCTCATAATTATTCTGACAGCAAAAGAAAGCCAAGAAAAAAactcaagaaaaataaatcggaaatgaaaaaaacattggCAAATGAAACTAATACAATGCCTCGGGAAAACTATAAAGAAACCAGTGAGAATGAAACGAACAGTGAAAACTTTTGTGattgtttacaaaaatctatagaaataagaaaaaaagctgAAAACCTCTTGAGTGAAATAGACACAAAAGGCATAACAGAAAAAGAGACAATAACAGATAAATGCGTCAAGATAACAGCAACAGAGGcgaatgaaagaaataatgcaCCATGTAATGAATGTTTACAACCTGAAGAAATAAGAGAATATAGTGaagttgaaaatttatatgagaaaCGTTCTATAGTTTCGAAGAAAcaatgtcaaaataaaattaaagcaatagaAAATAACTTCAGAAGAAAATCTAGAAAggatcttaacaaaaataaaaagcgaaCAAATGCAAGTGAAACATTACCAAAAGAAAAAGCAACAACACTAAATGTAAACTTTGAAGTAACAAATGAAAACCAAGAgaataatgaaaacttttatgGCTGTTTACAGAAATCTGTAGAAATAAGTACAAAAGCTCAAAAGTTCTTGAACAAAATTGATGGGAAGGATAGAACAGAAAGGGAAACAGTTACGGCTGAAAGTGCCAAAATAcctgcaacaaatgcaaatgaagcAAATAATGCAACATGTATTGAATGTTTGCAAACTGATAATATTATAGAAGACCCTGAAAAGTACTTAAAGCAAATAGACAGACAAGATATAAAAGAAAGTGAGACAGAAACAATTGAAAGTGTCAAAACAccagttgaaaatttattaaagaatcaTGAAACATTGAAAggaaattcaaatgaaaagcaTTCTAAGGTTCCGAAAAAACGCTGTCAAAATAAAACCATGGAAAATAACAGAaggaattttaaagaaaataataaaggaaCAAGTGCAAATGAAACATTACTCCATAAAGGTAAAAGAACACTCAGTGTGAACTCTgaagaaacaaatgaaaatgaaaataataaCAGAAGAGATTTAAAAGAAAGGGAAAGGGTAACAAATGGAAGTGTCAAAATGCCAATAGCAAATGCAAATGACACAAACAatgcaaaatttcttaaatgcttacaaaaagaagaaattgaaaatttattaaagggtCAGAGGCCtttcaaaagaaattcaaatgaaaatcaaaactattcTAAGGtcgcaataaaaaaacttagaaataaaactgaagtaaaagaaaataaaatgaaagaaatcagaaatctaatttcgaaaaatttcttatgctatgatacaaaaaatttacgaagaacaaaaactcaaaataataataaagtaaatgaaaGTGAAATACAGCAACGGGGAACGAATGAGAAGGAACAGCATGATTTCGAAAGGAAAGAAAAGTCCGAATATTCTCAGACTAGtcagataaatattaaaaaaaatatgcaaaatgcgGCAGATGAAAATAAGGTGGAAAAACAGGAATATAATGAAAGTGaaacagatgatttaaaaaagcagaaaaaatatcaaaaactagtattaaaatacaaaattagaaaatcaAAAGCAATCAATAAGAGATATTTACAAACTTTAAGTAAAAGGAATAACCTTAAAAGACAACTCCTAAGCCATGAAAgtggaagaaaaaattcaactccAATTCGATCCCAGCCTTTGAAGCCCTGCTCTTTTCGAAGCTACAAATCTATTAAGACTTATTGcgagaaaaaatcaaatattttgagaaagaaaaactacctgttaagaaatcattttaatacTGCCAAGAGTGCTGGAGGAAAAACTGACTTTAAAATAACCAAAGAAGAAACTATTATTGGCAATTTTCCTTCAAATGCAAGCAGAGAATTTCCCGAGAACTCGGACTTTCAAGAGTCAAGTGATTTCGCTCTTGAAGTTGCAGAAGGAATAAGAAGTGAAATATCATGCGCAGATGAAAATATGGGAGAATCTCTATTAGATAGTGTACAAGCGAAAGATGAAGCTAAGAAAGGTGttatccaaaaagaaaaaaacataagttTACCTCAAAAGGAGAACATCGTTACAAATACAAAGCAAACTTTGGTTActcaatattttacaaaaaaatatgacagcaaacaaaaaactttaagaagTTCCGACAACTCTGAGAATCTTGAAGAAATCTTAATTTCTAAGCAGCCTTACTTTCAACAATTTTCCTCTAACGAAGACAGTTCTGTAGTCCCAACCAAGGAACCTGTGTCCCCTCTTTCACCCAAAACCGAAGAAGAACATTTTGAATTCTATGAACCCAAAGAAaaactgaacaaacaacatatTACccatttaataaaactatacCAGGAACATCCACGCCTGTGGGATCAATCACATCAAGAATTTTGTGAACCTCAGGTGTGCCGCAAATCATGGGAACGCATCACTGAGCAGTGGAACGAGTTCTGCAAACGTAAATTCACCATAGCAGAGGTGCGAATACGCATAAGTACGCTCTGCCAACGCTTTATTCAGGAAAAACACCGTTTGGTTTTAGAAGGTGAAGTGGATGAGTGCGCCAAGTTTCCATACTACAAGCAAATGCAATTTCTAGAAAAACAGAAATCTTTACAAAAGAGACGAGAACTTTATGAGCAGCAAAATGAGAAAATATTGGAAATCTATCAACATTTTCCTGTACTCTGGCACGTTCGGTATTATAAGCTGAGAAAGGCTAAGGAAAGATCCCATGCTATTGAGAGCATAAGCAAGACGTTGAAATTGTTTGGTTTACATTTGTCCTCAATGGCGGTAGAGAAGCGGCTACGTTCACTTAGGAAATGGTATCGTTTGGAGAAGATACGTCATTTGCATGCCCAAGTGGAGCAAACGTCCTTTGAATCTACATTTCGGCATTATGAGAGAATGcattttttgaataaacatATAGATCCTTTTGTTTGCCATATTTGTGGGAAAATTTTTGAGCATTTACCAGGCTTTCGACAGCATTTGGAGGCTGAAGATCATGGTAGTGTGTTGGCAGAAGAAAATGAAGTTGAAAATGAATCACATGAAGAGACAGCAGATAAAACATTCTCAAAAATTCCATTGGAGAATAATGTTAGCACTGCAAGCCCCGAATCACATATTAATGAAGAAACTTGTGTGGAAAGTGAACAGGAGAGCATACTTATTGagcttgaaaatatttcattttctccCATTACCAATCATATGGAGTGTTTCTCGGCTTCAGAAAATTCTAGAGATATTTTACAAAGATTTACACCTTTATCATCTACACAAATAAAGATCAGTGATGCGATAAAAAATTCACCACTACATTCCTCAGAAAATATGCATTCTAATAATATCCAGGAAGCTTTAAGCTCTCCCATAAATACTACTAACGAATCTACTcttgacttttttaatttggaagatCAACTAATTGAGGAGATTATAGAAGATGTTGCCAAAAACGACAGTTTAGGACAACATGGATTAGATCAGtttatcaaTAATATAACAAGCTGTGAAATTGATGGAGCCTTCGAACTAACTACCGATAATTGCGCAACAGGGGAAGCTTTAAGTCCTAAACTTTTTCCTGCAGAAAATTCTTGTGCTACCGAACATTCTGATATTTTGGCAGATCAAACTTCCTGTGTGTTGGCTCTATCGCGCCCTATAGAAGGTTTTGATCCGGTTCATTTGTATACAGGAAACCCATTTATTATAGAACATCCCGATATAGTTACGGatcaaaatgttcaaaatacagggacaaataaggaaaatattgtTCCTGAAATTCTACACAACGAGGATTCTGCTATTATGGCGCATCCTGATATAGAAACAGATGCTTTTCTAGAAAAAGATATAGAAAACACTGCAAAAGTCTTGAGTCCCTATAAAAGTGAACCTAGTCCtagtaagaaattaaaacacCAAATGAAAGAACGAGGAGAAGCAGAAAATCTTTCGTCTCCCTCTCCCCTTGTGGTTAAAGTGCAATGTGCTGACTTTTCTCTTGATCTCAAATTAAATCCTACGTCTATGGAAACCCTCACTGCTAAGCTTAACGATTCTGACACTGAATTATTTCCCTCTGCCGATATTTCCACCGTACCCTTGCCCGAACATATAATACGTAAAATGATTGAAACTTATCGTAAATTTCCTCAACTTTGGAATCCCAATCATTTGGATTTCAATTCACGCATTCTAAGACGTCAGGCTTGGTGTTCGCTTACAACAGAACTCAATTCCGCCGTAGAAACGCAAATATCTTGGCGCACCTTGCATCGCAAATTAACAGATTACGTTAAATACTATAAGAAATTAGTAATGGAACAAGAAAACTATGAGCAGCTGAAACATAAATGGGCTTTTTATGATGATTTCAAGTTTATGAATGATGTGATTGCCGTAAATAATGAACTACAGCGCAGTGTTCACCATCgtgataataattttaagattaTAGCCACCTATAAAACTCTACCACAACTATGGAATATTAAACATCATGATTATAACAAACGTGGCACTAAACAgcgtaatattgaaataatgtgCAATAAATTGCAGGAGGAATACAATTTGCAATTGACCACGGAACGTCTTAAAAATCGTCTTATAGAACTAAGAGCGCAATATAGAAATGCCAAAAGGCAACGTCTTAAGTgtcttaaaaataatcaaaaattttcttcaaccgACTTTGAATATTACGAAGCGTTGAACTTTCTAGATGAGCACATAGATCCGTTTGTCTGTGACAAATGTGAAATGGACTTTAAAAAACGTACTGACTACAAACAACATCTTAAGAAAGATCATTCCCGATCTTCAACATATCCGCCACATGAACCGGGCATGGAAAATATTTGTCACATTTGTGGCATAAAATTTACCACACGCAGCAATCTAGTGCATCACATCAAACGTCACGAGGGCATACGCAACTATGCATGTAACATGTGTCCCAAAAAGTTTTATGCGTCCTACTCCTTAAAAGTGCACATTAGATCTCACACCAAGGAATGCCCCTATACATGCGAAAAATGTGGTATGTCTTTTGTTAGTGCCAGCAAACTGAATCAGCACATGAAGCGTCACTTGAACAGAAAAGATTTTCAATGTGATTTTTGCAATAAGGAATTTTTTACGGCTTTCGAAAAGGATCGTCATGAAAGGCGTCATTTAAATATTCGAGACAAGGTTTGCCCGATTTGTGGCAAAACTTTTGTGGCAGGCTCGTCGTACTATGCTCATTTAATGTTGCACGATAATACGAAACGTTTTGAATGTGATAAATGTGATATGAAATTTGCCCAATACGCTGGATTGTACAAACATAAAAAGAGGCATCACAACTAA
Protein Sequence: MMLNNEFNHGDHQLSRIPDHLKCGEVYTWQCADELYAVECNLCEDHPLCPLSEFPQHMEIWHTEWEVLTPTDCRDSEELQSTEDETENQSDLDNYNNDLASLGHTEDSSLHIFESDDQLQNERAITRHKQYEEILEPFEQVLIEQEIVMQGVNEEDFLEDESIQTAEADQSQIETKQKQSINTNQTLKHILNEVVASANEITECGRELQYSTDLKESEGDLNVNKTKDLRKIFETETEEETNETEKRTSEIGKEIRVGEREASEMHEAISGTGQSKETEVENKNCEKFVKQVEYPFKIKDNGLTENRICEIKSNKIETTSVDFKVKETNDNEDESDTQVNEVKLNNGSEIKENVKSTIKSTKTRTIKNEVSPIRNKTEFFNCGITANESETYNTKYNEFLRKSTEMRAKAHNYSDSKRKPRKKLKKNKSEMKKTLANETNTMPRENYKETSENETNSENFCDCLQKSIEIRKKAENLLSEIDTKGITEKETITDKCVKITATEANERNNAPCNECLQPEEIREYSEVENLYEKRSIVSKKQCQNKIKAIENNFRRKSRKDLNKNKKRTNASETLPKEKATTLNVNFEVTNENQENNENFYGCLQKSVEISTKAQKFLNKIDGKDRTERETVTAESAKIPATNANEANNATCIECLQTDNIIEDPEKYLKQIDRQDIKESETETIESVKTPVENLLKNHETLKGNSNEKHSKVPKKRCQNKTMENNRRNFKENNKGTSANETLLHKGKRTLSVNSEETNENENNNRRDLKERERVTNGSVKMPIANANDTNNAKFLKCLQKEEIENLLKGQRPFKRNSNENQNYSKVAIKKLRNKTEVKENKMKEIRNLISKNFLCYDTKNLRRTKTQNNNKVNESEIQQRGTNEKEQHDFERKEKSEYSQTSQINIKKNMQNAADENKVEKQEYNESETDDLKKQKKYQKLVLKYKIRKSKAINKRYLQTLSKRNNLKRQLLSHESGRKNSTPIRSQPLKPCSFRSYKSIKTYCEKKSNILRKKNYLLRNHFNTAKSAGGKTDFKITKEETIIGNFPSNASREFPENSDFQESSDFALEVAEGIRSEISCADENMGESLLDSVQAKDEAKKGVIQKEKNISLPQKENIVTNTKQTLVTQYFTKKYDSKQKTLRSSDNSENLEEILISKQPYFQQFSSNEDSSVVPTKEPVSPLSPKTEEEHFEFYEPKEKLNKQHITHLIKLYQEHPRLWDQSHQEFCEPQVCRKSWERITEQWNEFCKRKFTIAEVRIRISTLCQRFIQEKHRLVLEGEVDECAKFPYYKQMQFLEKQKSLQKRRELYEQQNEKILEIYQHFPVLWHVRYYKLRKAKERSHAIESISKTLKLFGLHLSSMAVEKRLRSLRKWYRLEKIRHLHAQVEQTSFESTFRHYERMHFLNKHIDPFVCHICGKIFEHLPGFRQHLEAEDHGSVLAEENEVENESHEETADKTFSKIPLENNVSTASPESHINEETCVESEQESILIELENISFSPITNHMECFSASENSRDILQRFTPLSSTQIKISDAIKNSPLHSSENMHSNNIQEALSSPINTTNESTLDFFNLEDQLIEEIIEDVAKNDSLGQHGLDQFINNITSCEIDGAFELTTDNCATGEALSPKLFPAENSCATEHSDILADQTSCVLALSRPIEGFDPVHLYTGNPFIIEHPDIVTDQNVQNTGTNKENIVPEILHNEDSAIMAHPDIETDAFLEKDIENTAKVLSPYKSEPSPSKKLKHQMKERGEAENLSSPSPLVVKVQCADFSLDLKLNPTSMETLTAKLNDSDTELFPSADISTVPLPEHIIRKMIETYRKFPQLWNPNHLDFNSRILRRQAWCSLTTELNSAVETQISWRTLHRKLTDYVKYYKKLVMEQENYEQLKHKWAFYDDFKFMNDVIAVNNELQRSVHHRDNNFKIIATYKTLPQLWNIKHHDYNKRGTKQRNIEIMCNKLQEEYNLQLTTERLKNRLIELRAQYRNAKRQRLKCLKNNQKFSSTDFEYYEALNFLDEHIDPFVCDKCEMDFKKRTDYKQHLKKDHSRSSTYPPHEPGMENICHICGIKFTTRSNLVHHIKRHEGIRNYACNMCPKKFYASYSLKVHIRSHTKECPYTCEKCGMSFVSASKLNQHMKRHLNRKDFQCDFCNKEFFTAFEKDRHERRHLNIRDKVCPICGKTFVAGSSYYAHLMLHDNTKRFECDKCDMKFAQYAGLYKHKKRHHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -