Basic Information

Insect: Germaria angustata
Gene Symbol: Zbtb41
Assembly: GCA_963681545.1
Location: OY812998.1:118274940-118278765[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.12 15 7.6 0.7 1 23 307 330 307 330 0.95

2 11 0.0027 0.34 12.7 0.8 1 21 394 414 394 415 0.95

3 11 1.7e-05 0.0022 19.6 0.2 1 23 423 445 423 445 0.98

4 11 0.00044 0.055 15.2 0.6 1 23 449 472 449 472 0.97

5 11 9.7e-06 0.0012 20.4 3.3 2 23 479 500 478 500 0.98

6 11 6.1e-08 7.6e-06 27.3 3.0 1 23 506 528 506 528 0.97

7 11 0.0005 0.063 15.0 0.5 1 23 534 556 534 556 0.99

8 11 7.2e-05 0.0091 17.7 5.9 1 23 562 584 562 584 0.99

9 11 0.046 5.8 8.8 0.3 1 23 590 612 590 612 0.97

10 11 0.0038 0.48 12.2 4.6 1 23 618 640 618 640 0.98

11 11 0.44 55 5.8 2.8 6 23 649 667 646 667 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.12	15	7.6	0.7	1	23	307	330	307	330	0.95
2	11	0.0027	0.34	12.7	0.8	1	21	394	414	394	415	0.95
3	11	1.7e-05	0.0022	19.6	0.2	1	23	423	445	423	445	0.98
4	11	0.00044	0.055	15.2	0.6	1	23	449	472	449	472	0.97
5	11	9.7e-06	0.0012	20.4	3.3	2	23	479	500	478	500	0.98
6	11	6.1e-08	7.6e-06	27.3	3.0	1	23	506	528	506	528	0.97
7	11	0.0005	0.063	15.0	0.5	1	23	534	556	534	556	0.99
8	11	7.2e-05	0.0091	17.7	5.9	1	23	562	584	562	584	0.99
9	11	0.046	5.8	8.8	0.3	1	23	590	612	590	612	0.97
10	11	0.0038	0.48	12.2	4.6	1	23	618	640	618	640	0.98
11	11	0.44	55	5.8	2.8	6	23	649	667	646	667	0.90

Sequence Information

Coding Sequence: ATGAATACGGAAAAAGTGTGTAGATGTTGTCTGGCTTTGGATGGACCTCTGTTGTCCATATATGATGGTGGCTCAGCTGGAATGGGCTGTGTGGCGGATATGTTGAAACAAATAGCTAAGTTAATGCCTCATCCTGCCGATAACATGCCAGAAAAAGCGTGCCTGCAATGTATTAGTGAAATCAATCGCTGTTATGTGTTCAAAATGAAATGTGAAAATTCGAATAGAACTCTTAGACAATTATTACCGGAAGCAGTACCTGAGCCTTTAGATTTGGtaccaaaaaaagttattgtatCCTCTTCTGCGATGCAGACAGACGACAAAATACTTGTATCATCTCTTGTGCAAACTGTAGAGGAAGTTAAGCCTATAGTAAGCCATAGTAGTGTTCAAACAGTCGAAGAAGAAAAACCATTTGTAAGTCATAAAGGAATACAAACTGATTCAGtagaaggaaatatttttatttacgaaGAAATCGGTAACTCAAaggaaaaaactgaaaaacacGAACGATCTTCACCTGATAGCAAGCAGATGAACAAAAAGTTGTGCCTGAAAAGCGATTATCTAACGATTGAGGAATCCGAGTCAACTGCTGAGCAAACAAGTGCTTATATATTACTTGAGGACTCCAATTGTTCCGGAGAACCAGAGATATATACAAGAAGCACATCAGAAAACCAAAAATACTCAGAATGCGAGCGCTatgaatattatgaaaatgaagTAGATGAAATTGAGGATGgtgatgaaaaagtttttacataCCAGGATAATGATTATTCCAATGAAAACTTCAATATGCGAACTGTTTATGAAATTGAAAGTTCTGAAGGGAAGACAAAATCTGATGAAGAAGCTGAAACAATAATAAAGCCTAGAAACAATAGAAAGAACAAACCTAAAGGCCAATACAAATGTTCACAATGTATAATGACATTTGTGAGTATAAAAGTTCTTAAAAGGCACTTAGCCAATCGACACGATATTAAAGATGCTGAACTTATAATTGATTATGTACCACCTGCTGATCCTGAAGAGATATCatccaataatacaacaaaGTTGCATAATTCCATTGTAGAACTAACACcagaaaatgttgcaaaaccTCAATTAATGCCAAGAGAAAAACCCGTTACAATAAATGAGGAAGCATTAACAAATGTAAAGTATTTTTGCGACAACTGTCAAGCTGGATTTGCCCAACGTAAAACTCTTACAATACATATGAAACATCGAGTCTGCATGACTGATAATTTTAAATGCAATATATGTGGGAGTATctttgtttctgaaaaaaatttagaagctCATAAACTCACACATGAAAATTCACATAAATGTCTCGAATGTGATACTGCCTACAAAACTATTGAGGAATTGAGTCAACATATGATTAGAGATCATAAAAGGAGTGCCCGTAATCAATGTCATGTGTgcaaaaaagtttttacaaTGAAAACATCGTTAAATAATCATCTGCGCATACACAGCGGTGAAAAGCCATTCCATTGCACAATTTGTGGCAAAAGTTTTAGCCAGAATTCAAATCTACGTCAGCATTTGATACGTCATACGaatgagaaaaatttcaaatgtgacTTATGTCCAAATGGGTATGTAACTAAAGCGGAATTGTACTCCCACAAACGTACCCACACTGGTGATCATCCATTCAAATGTGACAATTGCCAAGCTCGTTTTACCACATCCTgctcattaaaaaaacatttacgcAAACATACAGGTGAAAGACCTTATGCTTGTGAATTCTGCCCCATGCGATTTTCTGctcttaatatattgaaaaatcatcgGCGAATTCATACCGGCGAAAGACCTTTCCAATGCGTTCATTGTCCAAAAAGATTTTCGCAGAAAGGTGACTGTTTATTGCACGAGAGAACACACACAAAAGAGGACTTCAAATGTTTTTGCGATTCgaaattcttgaaaaaatcaaacttaagATCTCATATAAGAAGGAAGCACCCCAATTTAAGTGAAAAAGAAATTCaagcctttttatttaaaaccgtAGATGATAATGACAATGCTGAATATCAAATAACATTAATGGAAAGCACGGAAGATAAATGTGATGATAATGGTGCTTTTACTGCAATTTCGAAAGAAAAAGAAGCCCCAAATAATAATGCAGAATTCTTAGAAATTGCAATGGAAGATGTAGGTTAA
Protein Sequence: MNTEKVCRCCLALDGPLLSIYDGGSAGMGCVADMLKQIAKLMPHPADNMPEKACLQCISEINRCYVFKMKCENSNRTLRQLLPEAVPEPLDLVPKKVIVSSSAMQTDDKILVSSLVQTVEEVKPIVSHSSVQTVEEEKPFVSHKGIQTDSVEGNIFIYEEIGNSKEKTEKHERSSPDSKQMNKKLCLKSDYLTIEESESTAEQTSAYILLEDSNCSGEPEIYTRSTSENQKYSECERYEYYENEVDEIEDGDEKVFTYQDNDYSNENFNMRTVYEIESSEGKTKSDEEAETIIKPRNNRKNKPKGQYKCSQCIMTFVSIKVLKRHLANRHDIKDAELIIDYVPPADPEEISSNNTTKLHNSIVELTPENVAKPQLMPREKPVTINEEALTNVKYFCDNCQAGFAQRKTLTIHMKHRVCMTDNFKCNICGSIFVSEKNLEAHKLTHENSHKCLECDTAYKTIEELSQHMIRDHKRSARNQCHVCKKVFTMKTSLNNHLRIHSGEKPFHCTICGKSFSQNSNLRQHLIRHTNEKNFKCDLCPNGYVTKAELYSHKRTHTGDHPFKCDNCQARFTTSCSLKKHLRKHTGERPYACEFCPMRFSALNILKNHRRIHTGERPFQCVHCPKRFSQKGDCLLHERTHTKEDFKCFCDSKFLKKSNLRSHIRRKHPNLSEKEIQAFLFKTVDDNDNAEYQITLMESTEDKCDDNGAFTAISKEKEAPNNNAEFLEIAMEDVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -