Basic Information

Insect: Germaria angustata
Gene Symbol: azf1
Assembly: GCA_963681545.1
Location: OY812998.1:103806592-103809048[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.7e-06 0.00022 22.8 0.9 2 23 277 299 276 299 0.96

2 8 0.0017 0.21 13.4 8.0 2 23 307 329 306 329 0.96

3 8 0.00023 0.029 16.1 4.3 1 23 347 370 347 370 0.97

4 8 2.8e-06 0.00036 22.1 1.9 3 23 408 428 407 428 0.99

5 8 0.0011 0.14 13.9 1.4 1 23 434 456 434 456 0.98

6 8 2.7e-07 3.4e-05 25.3 1.6 1 23 462 484 462 484 0.97

7 8 2.6e-05 0.0033 19.1 2.7 1 23 490 512 490 512 0.99

8 8 2.6e-05 0.0033 19.0 0.6 1 21 518 538 518 542 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.7e-06	0.00022	22.8	0.9	2	23	277	299	276	299	0.96
2	8	0.0017	0.21	13.4	8.0	2	23	307	329	306	329	0.96
3	8	0.00023	0.029	16.1	4.3	1	23	347	370	347	370	0.97
4	8	2.8e-06	0.00036	22.1	1.9	3	23	408	428	407	428	0.99
5	8	0.0011	0.14	13.9	1.4	1	23	434	456	434	456	0.98
6	8	2.7e-07	3.4e-05	25.3	1.6	1	23	462	484	462	484	0.97
7	8	2.6e-05	0.0033	19.1	2.7	1	23	490	512	490	512	0.99
8	8	2.6e-05	0.0033	19.0	0.6	1	21	518	538	518	542	0.91

Sequence Information

Coding Sequence: ATGGGCCGCAAACAGAAGTTGGAAACTAAGCAGTGTCGCACGTGTTACAATGCCACCAAAGGCTTGAGACTTCTTACTAATCTCATAAAATGCGGAGGCAAATCTGAACAGAAATCTTATGCAGAGCTCATAACCGAGGTGTCTAACATTAATATAATGGAGGATTCTTGTAAAGAAATGCCAAAATTCATATGTGACGTTTGTTCCCGGAAACTGAAACTAGCACATTCATTTATTCAACAAGCTCATGAAGTTAATGAGCGACTTAATTCAATGCTTATCGGCTTGGAGGAAGCAGATAAACAGTTGGATTGTTTGCAGGAAGCCCAACTTGATATACGGTCatgtttggaaataaaaatggaatacGATAACACTGTTGAAAACGatgaaatatatcaaaaatttcatGTTAAACTCAAAATGGAAGAAACAGaagaatatttgcaaaataatattttagatgAGGATgtactttgtgaaaagaataatGTCGGGCAAGCTGAACTAATTGGCTTAGAGAAAGCATTAGatgtaacaaatattgaaaCCATTAAAAACCCAGACAATCTTAAAAGTAATTCAGCTAGAGActctcaaatgaaaaataaatcagaATTATCACCCTGTTTTCATAGTGAAGACAATGAAAGTGGTAGTGACAATTATGAAGTCAACAACGGTCAGGAAATTGACTTGGAATCGCAAAAGGACGATGAAAAAGACATTTCCCTAAATAGTAATAATGAAGTGAAGAATGACtttaaaatatacagaaaacCTGAAGAAGTAATGGAAAATCTGCCCAAAGATTATGATGTAGCTGTACCCTGTAGccaatgtaataaaatatttaacaactcCAAAGCCTTGATGCGTCACCAACGCACTAGTCATATACCAGAAGATCAAAAATGTACTTGCCCTTTGTGTTTTCGTAAATTTTCTCGGTCTTGCAATATGTACACTCACATGCGTACATTTCACGGTCCTGATACTGTGCCACTAATACGTAAACCATCAACACAGGAGAGAATATTTCAATGTGATAGATGTCCTAGAAATTACACCAAAAAGAAACATctcaacatacatataaaaaataaacatagtcAAGAAACTGAAATATGTAaggaaaaatcaaacgaatatataaattatcaCGACGAAGAAACACCCGCTAAATCCATTAAACCCAAAAGATACGAAGTTCGTTCTTTATGTTCTATTTGTGGCAGTTCGTTTTCTAGTAAAACTCACCTGATTGTACATATGCGACGTCATACAGGAGAGCGGCCTTTCAAATGTGATCTTTGTGATCGTGCTTACCCGCGCATATCTGAATTAACGTGCCATCGGCGCATACATACCGGTGAAAAACCGTTTGCATGTAAAATATGTGGTAAGACTTTTCGGGTTTCTAGTAAAATGACCACGCATATGCGTTCTCACACTGATATACGTCCCTATAAGTGTACGCAATGTGAACGAAGCTTTAAATATTCCAAAGACTTGAGTATACATTTTCGTATACACACTGGAGAACGACCATATAAATGTAATGTGTGCGGAAGCACATTTACGCAAAGTAATACTCTTAAAGCCCATCGTGTCAAGTTGGGTCACACGGATAATGTTTTGGAAATTGgcaacaatttataa
Protein Sequence: MGRKQKLETKQCRTCYNATKGLRLLTNLIKCGGKSEQKSYAELITEVSNINIMEDSCKEMPKFICDVCSRKLKLAHSFIQQAHEVNERLNSMLIGLEEADKQLDCLQEAQLDIRSCLEIKMEYDNTVENDEIYQKFHVKLKMEETEEYLQNNILDEDVLCEKNNVGQAELIGLEKALDVTNIETIKNPDNLKSNSARDSQMKNKSELSPCFHSEDNESGSDNYEVNNGQEIDLESQKDDEKDISLNSNNEVKNDFKIYRKPEEVMENLPKDYDVAVPCSQCNKIFNNSKALMRHQRTSHIPEDQKCTCPLCFRKFSRSCNMYTHMRTFHGPDTVPLIRKPSTQERIFQCDRCPRNYTKKKHLNIHIKNKHSQETEICKEKSNEYINYHDEETPAKSIKPKRYEVRSLCSICGSSFSSKTHLIVHMRRHTGERPFKCDLCDRAYPRISELTCHRRIHTGEKPFACKICGKTFRVSSKMTTHMRSHTDIRPYKCTQCERSFKYSKDLSIHFRIHTGERPYKCNVCGSTFTQSNTLKAHRVKLGHTDNVLEIGNNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -