Basic Information

Insect: Germaria angustata
Gene Symbol: Zfx
Assembly: GCA_963681545.1
Location: OY813002.1:68454796-68456565[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.13 17 7.4 0.2 3 23 232 253 230 253 0.91

2 10 1.5 1.9e+02 4.0 3.0 6 21 263 278 263 280 0.94

3 10 4.3e-06 0.00055 21.5 0.5 1 23 286 309 286 309 0.97

4 10 5.4e-05 0.0068 18.1 1.8 1 23 318 340 318 340 0.97

5 10 3.7e-05 0.0046 18.6 0.2 1 23 348 371 348 371 0.95

6 10 9.4e-05 0.012 17.3 0.4 2 23 378 399 377 399 0.97

7 10 0.066 8.3 8.3 0.2 3 23 409 430 407 430 0.93

8 10 2.2e-05 0.0028 19.3 1.2 1 23 438 461 438 461 0.97

9 10 9.9e-07 0.00013 23.5 0.8 1 23 467 489 467 489 0.98

10 10 1.9e-05 0.0024 19.5 1.1 1 23 495 518 495 518 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.13	17	7.4	0.2	3	23	232	253	230	253	0.91
2	10	1.5	1.9e+02	4.0	3.0	6	21	263	278	263	280	0.94
3	10	4.3e-06	0.00055	21.5	0.5	1	23	286	309	286	309	0.97
4	10	5.4e-05	0.0068	18.1	1.8	1	23	318	340	318	340	0.97
5	10	3.7e-05	0.0046	18.6	0.2	1	23	348	371	348	371	0.95
6	10	9.4e-05	0.012	17.3	0.4	2	23	378	399	377	399	0.97
7	10	0.066	8.3	8.3	0.2	3	23	409	430	407	430	0.93
8	10	2.2e-05	0.0028	19.3	1.2	1	23	438	461	438	461	0.97
9	10	9.9e-07	0.00013	23.5	0.8	1	23	467	489	467	489	0.98
10	10	1.9e-05	0.0024	19.5	1.1	1	23	495	518	495	518	0.96

Sequence Information

Coding Sequence: atggAGTGCTGTTTATTGTGTTTAGAACTAAATAAAGAATTGTTAGATTCCATAGAAGCGAATTCCAAGCAATGGCAAGAACTTGGTATAGCAAAAGTATTAGAGAAGCATTTCTGGCCTATGAATAGTATACAGCAGCCATCGTCTTGGATATGTTTGTCTTGCTGGCAAGAAGTTGATAGTTTTCACAAATTCTACTTGCGCATTGAAGAAGCTCATATGAATTTTGGTAGAATAAAAATTGAGGAAGGAAATCAATTACTGGACTCAAAAGAATTGAGTCAAGATCTCAAAGGTCTTTCGTATTGTCTTGAACCGGAAATATTAATAGATCAGAACGAATTACAAGCTGTAATAGATATTAAAGATAGCTCTGTTAAGGAGGAGGGAGATATAGATGATGTCTGTGAGAGTTCTATAATAAGTAAGGACCCTTTAAAGAAACCAATTGTTTCAAGGaggaaaagtgtaaaaaattcaaGAGCGAAGCTCTCTATTAAATTGAAATCTGAGCAGAATAATCAATTACCCGAAGTTAAAAAAGAAGCAAGTGATTCAGATAACAGTGACAATGAAAATGCAagtgatgatgacgatgatgattgTAACTATGAGCCAGGTAAAAATCCCACAGAATATAAAAATCGCAAAGAAGGTGACAAATTTATTGCagaacattttaaacaaatgttttgcGATCTATGCGATgttccatttgaaaattttaccgccatgaaaaaacattttctgttgGTGCACTCCATTCAAAAAGGGTATCTAGTTTGTTGCAATAGAAAATTCTATCAGCGAAATCATTTAGTTGATCACCTACAATGTCACTTCAATCCAGATCACTTTAAATGTAACCAATGTGGAAAAATATTATCTGATCGAAAGAACTTACAAGGTCATATGCTACGAGTACACCGGCCAGAAGATGTCGTTGCAAAACATTCTTGTGAGATTTGTGGGAAATCCTTTACGATGGCCTACGTCTTACGTACACACAAATTGAAACATCTGCCTAAAGAGGAGAAAAAGTTTCCATGTACACAATGTGGCAAATTctATGCGAGTTcctatttattgaaaatacacacTGAAGTGATACAtctaaaaaaacaagcaaaagttTGTTATATTTGCGGTAAAACCTTAGGCACTAGTACAGAATATAAAGCTCATATGAACAAACATGCAGGCATTCCTGCTCCCGTTATAAATTGCGATGTCTGTGGCTTACGACTGATCAGTGAAAGGAGTCTTAAACTTCACAAAGAATCGCAACATCCAGTAGGTGGCAAACAGGATCATCCCTGTCACATATGTGACAAAATATCGCCAACGGCAAGGGCTCTCAAAAAGCATATAAATACGATGCACGAAAAAGGTTTTGACCATAAGTGCACCATGTGTGAAAAAGCATTTAGGAGGCCTGAAGCGCTAAAGGAGCATATGGCTTCACATACTGGAACTCCTTTATATGCATGTCCTTGGTGTCCAAAGACGTTTAATTCGAATGGTAATATGCACGCTCACCGAAAAAATAAACACCCTAAAGAATATCTAGAACTAAAACTTCAAAGGTATAATTAG
Protein Sequence: MECCLLCLELNKELLDSIEANSKQWQELGIAKVLEKHFWPMNSIQQPSSWICLSCWQEVDSFHKFYLRIEEAHMNFGRIKIEEGNQLLDSKELSQDLKGLSYCLEPEILIDQNELQAVIDIKDSSVKEEGDIDDVCESSIISKDPLKKPIVSRRKSVKNSRAKLSIKLKSEQNNQLPEVKKEASDSDNSDNENASDDDDDDCNYEPGKNPTEYKNRKEGDKFIAEHFKQMFCDLCDVPFENFTAMKKHFLLVHSIQKGYLVCCNRKFYQRNHLVDHLQCHFNPDHFKCNQCGKILSDRKNLQGHMLRVHRPEDVVAKHSCEICGKSFTMAYVLRTHKLKHLPKEEKKFPCTQCGKFYASSYLLKIHTEVIHLKKQAKVCYICGKTLGTSTEYKAHMNKHAGIPAPVINCDVCGLRLISERSLKLHKESQHPVGGKQDHPCHICDKISPTARALKKHINTMHEKGFDHKCTMCEKAFRRPEALKEHMASHTGTPLYACPWCPKTFNSNGNMHAHRKNKHPKEYLELKLQRYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01177176;
90% Identity: -
80% Identity: -