Gang025483.1
Basic Information
- Insect
- Germaria angustata
- Gene Symbol
- T
- Assembly
- GCA_963681545.1
- Location
- OY813001.1:9008499-9010895[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6 3e+03 -0.7 0.0 22 32 25 35 24 35 0.86 2 2 2.6e-11 2.9e-08 34.6 0.0 4 40 47 84 45 87 0.88
Sequence Information
- Coding Sequence
- ATGACTGATGACTTTGATTTAATGGAGTGGTGGcgcaaaaatgagaaatattatCCTCGCTTATGCAAATTCGCTCAGCATGTGCACTCAATACCTGCAAGCAGTGCTGCATCGGAACGTGCCTTTTCATTAGCGGGATCTTTAAAAAGTGCCTTAGACGAAATAAGAAAAGGCACGATTTCTATAAAAGGTGCCAGTAAAAAATATGGTGTTCCGCGTTCCACTATACAAGACAGAATACATCGCCGTATTGTTGAAGGTCCTAGAAGAATGGGTCCACACACAGTTTTAACAGATGTCGAAGAAAAACGGTTAGTAAAATGGTGCGAAGatctttag
- Protein Sequence
- MTDDFDLMEWWRKNEKYYPRLCKFAQHVHSIPASSAASERAFSLAGSLKSALDEIRKGTISIKGASKKYGVPRSTIQDRIHRRIVEGPRRMGPHTVLTDVEEKRLVKWCEDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -