Basic Information

Insect: Germaria angustata
Gene Symbol: lov
Assembly: GCA_963681545.1
Location: OY813002.1:17111627-17131755[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.1e-17 1.3e-14 54.9 0.0 1 44 807 850 807 851 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.1e-17	1.3e-14	54.9	0.0	1	44	807	850	807	851	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGAATCAGAGGAAATCATTAAAAGGCGCAAACTGTCGTTAACGGCAGATACTGCTGCATACCCAGCATTTAATCACAACGGAGCTTTAGCCGACACCATCATACCACCCAAACCATTTGCTAACACCATGGCCTTGGAAACAGAATGCTCAGAAGCTTTAGCTTTGACTACCACAACTTCAGCTACAGCACCCATTTCAACACCAAATATGACCAACACAAACAGCACATCAGCAGATTTAAATAGACTCACCGCCAACCATATGGTAAATACGTTATTGGCAAATAATGTTACAACCAGACCAGCTGCCTCCATACCTGACCATTACAGCTTGAGATGGAATAATCACCAGAATCATTTGATGCATGCTTTCGATGCATTGCTTCAGACAAAAACTTTAGTAGATGTTACGCTCGTATGCGCTGAAACTAGTATACGGGCCCACAAAATGGTCCTGTCGGCCTGTTCGCCCTTCTTTCAGCGTGTGTTTGCCGATACACCTTGCAAACATCCGGTTATTGTGCTTAAGGACTTTCGTGGTTGGGTAGTGCAAGCAATTATTGATTTTATGTACCGCGGTGAAATAAGCGTACCCCAGGAGAAATTACACACCCTAATAGATGCTGGAGAGTCTCTGCAAGTCAGAGGTCTAGTGGAAAGCTCTATACCTGAACACACTCCTACACCGGCTGCATCACCAGATGACTTTGGCGTGATCGATACCTCCTTGCTGTCGTCTGAATTGGAAAGATGTTCCAGTTTTGATGAAGAATCTCCCTCCATGGTTACTGCAGgctcaaaaattatattgcctTCACGTTTATTTAGCTCCACATATAGACGTGATAAGGAACAACGAAAGCGGGAAAGAGAACGAGATTTGGAACACGACTTAGAAAGTGATCATGAACTGCTAAACGATGCTTTGAGTCATAACGATTTGTGCTCGTCCCCCATGCCCAGAAGAAAACAAGCAAGACCTAGAAGAAGATCAGGCGAATTAAGTCATGACATAATTAGCAAACCTGCACAAGATTGTATCGAGCAACCAGAGAATCTTTGTAAAGATTCCAGTACTCAGCAAAACAGTGAAAAAAGCCCTGTGCGAACGATAGacgaaaaaatggaaaatcccTTAAAAACTGTGATTAAATCCGAAATGGCGGAATCCATACAGGATAATGAGGATCAGGTCGGTGAACGTGATAGTGGCAATGATAGTCATGAACAGCCTGAAGACTTGATTGTGAATGATAAATCCTTGGATAATAATTTAAACCTTAATAACAATAACTCGCAATTGGCGTCTGGGGACGCTGCGGAGGAACTGGAAGAGGAGGAGGAGGAGAGAGAACGAGAGGAAGAGCCGGAAGAAGAGGCAGAAGAGGAAGAAGAGGAGGAAGATATTGAGCAGCTAATACATCACACCAATGAGTTAAATAGAAGACGTAAAtcagctttgtccatcaactcaGATGGGCCGGAGGACTTGTGCACTACCAAAAAAGACAACGACACCAGTGGTCATCATTCGGCCTCTGACAATGAAGACTctagcaacaataacaatagcagtaaattaaacaacaataatCGAATAGTTTTATCCCTGAAAGACATACGTCAACTGAATAAACCATCCTCCTCATCAACTCCCAACTCTTCAGCTAATACCATGAATCCTTTTTCGACGGCCAGCCTCAGAGACCTCAGACTAGATCGAGATCGGGCTATGGAAACGCAATGCAAAATGGAGGTATTGGAAGCTCAGATGCAGGCAGCCGCAGAAGCAGCCGCCGCCGCAGCTGCAAGAGGTGAGAATCCTTTTCAGCATATGGAACACCAAATGGATTTATCACTAGCTGCCGCCGCCGCAGCTGCCGCCGTCTCCCAACAGCATTCGCGGGAGAGGGATCAAGCTTTGCAAAGAGAACAACGAGAAATACAACAACAGCATAATGCTTATGCCAATAGCATCTTGGGACAAATAGGAATGCCAGGCATGCCGCCCTTTGGACCTGGTCCCGGTGCGCCTACCGGACCTGGTGGTCCCTCTGCTCACGAACGTTTGGAAGAGTCCATGAATCGCTTGAGCAAAGAATTCACTCCAACCTCACCAATGAGCCTACCACCGCACTACAATCCCCAAGATGGTCCACCACATCCTCCCTCGCCGCTGCCCTTTCCTGGTATGTCATCATTGGCGCTAACTCCGCCGCACATGTTTGGTCTCGACTCACCTTTGGGCTTATTCCCACCTGGCATAGATCCCGGCAAATTATATAATCCCCTTATGGAAATGTCCGATCCTAGAGGCATGCCAGGCGATCCCCCGCCCTTTCTGAAGAAGAAGGtGCCTAGACCAAAAGGTCAACATTCTGCACCGAGAGGCGGACCACCTCGTTCCTGGACGAATGCCGAACTAACAGAGGCCTTACAGCATGTGTGGAATAAAAAAATGACCACTTCGCAAGCTTCGCGTATCTTTGGCATACCCTACAATTCCCTCTTAATGTATGTGCGAGGCAAGTATGGAAAATCGTTGAAATTGGAGCAATTGCGGAAGGATTGCATAAGTGGCCCACCTTTGGAGATGCTGCAAATGGGCATAAGTTCTGGTTCAAGTAAAAACTCTGGAGAAACTAAGGAACAAAGGGAGGCCCGTAAGGAGGCTCAACGTAATGCCAACCAACATCCGCCTAATGATCTGGATCTGGGAGGTCCTTTAACGGGGCCAGGACCCCGACCCTCCAGCTCTGAACCAGATTTATTGGGCGGGCCCAATTCCCTGTTCAATCCCTTCAATCCTCAAGGTTTCTATCCCGATTTTCCTGGAGGATTTCCTGGTTTACCTTTAAGTATGTTGAATTTATTGCCACCTACGGAAAGACAACATGCAGCTGCTGCGGCCGCAGCAATGCACCACTCCATGGGCTTGGATGAGGACTGTAAATCTGATCGTTCAAAACAATCCTCCAACATGGATGATGAGTTCTCTATGAGCCGGGAAGAGCGTCGGCATTCAGATTTAATGAACAATTCCTCCACACCCTCCGCTTCTTCGTCGCAGCAAAATGGTCCGTTGCAAGATTGA
Protein Sequence: MLKESEEIIKRRKLSLTADTAAYPAFNHNGALADTIIPPKPFANTMALETECSEALALTTTTSATAPISTPNMTNTNSTSADLNRLTANHMVNTLLANNVTTRPAASIPDHYSLRWNNHQNHLMHAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFADTPCKHPVIVLKDFRGWVVQAIIDFMYRGEISVPQEKLHTLIDAGESLQVRGLVESSIPEHTPTPAASPDDFGVIDTSLLSSELERCSSFDEESPSMVTAGSKIILPSRLFSSTYRRDKEQRKRERERDLEHDLESDHELLNDALSHNDLCSSPMPRRKQARPRRRSGELSHDIISKPAQDCIEQPENLCKDSSTQQNSEKSPVRTIDEKMENPLKTVIKSEMAESIQDNEDQVGERDSGNDSHEQPEDLIVNDKSLDNNLNLNNNNSQLASGDAAEELEEEEEEREREEEPEEEAEEEEEEEDIEQLIHHTNELNRRRKSALSINSDGPEDLCTTKKDNDTSGHHSASDNEDSSNNNNSSKLNNNNRIVLSLKDIRQLNKPSSSSTPNSSANTMNPFSTASLRDLRLDRDRAMETQCKMEVLEAQMQAAAEAAAAAAARGENPFQHMEHQMDLSLAAAAAAAAVSQQHSRERDQALQREQREIQQQHNAYANSILGQIGMPGMPPFGPGPGAPTGPGGPSAHERLEESMNRLSKEFTPTSPMSLPPHYNPQDGPPHPPSPLPFPGMSSLALTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMPGDPPPFLKKKVPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLEMLQMGISSGSSKNSGETKEQREARKEAQRNANQHPPNDLDLGGPLTGPGPRPSSSEPDLLGGPNSLFNPFNPQGFYPDFPGGFPGLPLSMLNLLPPTERQHAAAAAAAMHHSMGLDEDCKSDRSKQSSNMDDEFSMSREERRHSDLMNNSSTPSASSSQQNGPLQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00922026;
90% Identity: iTF_01137919;
80% Identity: iTF_00742015;