Gang021521.1
Basic Information
- Insect
- Germaria angustata
- Gene Symbol
- ttk
- Assembly
- GCA_963681545.1
- Location
- OY813000.1:49448227-49454761[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-18 2.3e-15 57.3 0.0 2 45 569 613 568 613 0.97
Sequence Information
- Coding Sequence
- ATGTCGgtgcaacaattttgtttacgtTGGAATAACCATCAACCAAATTTTATCTCTGTCTGCTCTTCTCTACTGCACAATGGTACACTGGTGGATGTTACACTGGCTGCTGAGGGTAGGCAGTTACAGGcacacaaaattgttttatcagcTTGCAGTTCATATTTTCAGACGCTCTTTACAACTAATCCATGCCAACACCCAATCGTAATATTAAAAGATGTGCAGTATGATGATCTTAAGACAATGGTTGACTTCATGTACTACGGAGAAGTAAATGTGTCGCAAGAACAACTGCCGCATATATTAAAGACGGCAgaaatgcttaaaattaaaGGTCTCGCTGAAATGCCCACCGATCCTGCAAACTTAACAAAATCTGATAGCAAGTCATCGAATGATGCTACAGAACTTGTTGGTGGTGGAGGTGATAATGGGCAGTTAGGCGGCAATGCTGGCGGCGGTGCAAGTTCAGTTGGTGGTGGAAATACAAGTAGTGGAGGTTTGGGTAGCAATAGTGGCGGCGGCAATGTTAACGATTCAATATGGGGTAGCACTGAATCtcaatttcaacaacaacagcagcagcagcaacaacagcaacagcatcaacaacagcagcaacatcatcagcaattgcaacaacagcagcaacatcaccatcatcaacaacagcagcagcaacaacaattacaTGCGCAATTGCAGAATAGTCAAACGCAAACctcacaacaacagcaacaacaacatcatcaacaacaatTACGTCGCACGCCATCCCCTTTAGGCGCTGGCGCCTCGCCAGCTACCAGGCGAAAACGATTAAGAAAGTCCTCAAATAATGgACCTGGCGAAAGAACAAATTCCGAAGATCATAATACATCTATAGATGCCGCCACAGCTGGCGGTTTGACATTATCCCAAATGAGTCAAATGTCGTTCAGTGGTGCAGCAACAAATAGTGCTCTAAGTGGTTTAGCCGCACACTCCTTGCACACAGCTAAATTACTTAAAGAAGCCTCTAATAACGACTTAGAAACAAATCCTCAAGACTCAGATAGTTTAGATGAAACACATGGACATGTACATAtgcaaattAAACCAGAAGTTGATATGAGCGGCGTGCCACAGTCTATGCCATTAGATATATCAGGTCCCACAACGCCATCTGAACATGATGCACCCAATTCGCAATCCGCACATTCAGGTTTACAATGGACGGTTGTTGAACCAAATTACTCACGCTTTTCGCTGTCATCCTGTCCCACCAATTTAATTGGCAATAATCAAAACTCAAAtgccaacaataacaacaactcaAGTAGTgatcaacagcaacagcagcagcagcatcgCCAACAGCAGGATGCTGTTGctaaccaacaacaacagcagcaacaacagcacttgcaACAATTACAGCAATATCAGCACCAACAAAACTCTGCATATTCGCCGCAAATTATAACGGTGAGTGGTTACACTAACGCCGCAGCAGCTGCTGTAGCAGCGGCGCAAAATTTATCACCACCCTCGCCCAGCGACGGTAATATGGTGCAAACAGTATACAGCCAAGGACCAACACCCATACAATCACCTGTGGGTAATGCGTCAGGCTCAGGTGGTGGCAGCAACATGTCCGGTGGCAATTCAGCAAATAACAGTGCCAACATCAAGCGGAAACGCTCAGTTAATCCGCAGGgcgatgaaaattttataagggCATTGGAGGCAGTGCGTACGGGAGGTATAGGTTTCTGTAAAGCAGCTCGTCTGTATGGTGTTAATAATCGTACTTTATGGCTGGAATATAAGAAACGCGGTTATCCTGTGTCCAGGCCCAGTATAAAATCACGTGTAGTTAAACAAGAACCAAATCTCTCGCCATCTCCTACGCCACCTACTACCGCTACAGACGATACCAATGAGAATTATGATCATATGGCCGCTGCAGTAGCGGCTGCACAAACGGCCGCTCTTAATATGCAAATACCACCGACTTCCGAAACACCGACACCCTCTTTAATGTGCACAACTCATCATGCTAGCACACCCGCTGGTGCTACCACACACCCCACAATGGGTGTTATGAGTTTCTTGGATACCCGCCATATGGACTTCCCAGCCAGTTTGCATTCAATGTCTCGTCAACGTTATATTGACGCGGGCACCGGTAGTGGGGCTGGTGCGGGCACAATCAATGTTAATccggcagcagcagcagcagcaatgaATTTACAGAGTATTAACTTTAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSNDATELVGGGGDNGQLGGNAGGGASSVGGGNTSSGGLGSNSGGGNVNDSIWGSTESQFQQQQQQQQQQQQHQQQQQHHQQLQQQQQHHHHQQQQQQQQLHAQLQNSQTQTSQQQQQQHHQQQLRRTPSPLGAGASPATRRKRLRKSSNNGPGERTNSEDHNTSIDAATAGGLTLSQMSQMSFSGAATNSALSGLAAHSLHTAKLLKEASNNDLETNPQDSDSLDETHGHVHMQIKPEVDMSGVPQSMPLDISGPTTPSEHDAPNSQSAHSGLQWTVVEPNYSRFSLSSCPTNLIGNNQNSNANNNNNSSSDQQQQQQQHRQQQDAVANQQQQQQQQHLQQLQQYQHQQNSAYSPQIITVSGYTNAAAAAVAAAQNLSPPSPSDGNMVQTVYSQGPTPIQSPVGNASGSGGGSNMSGGNSANNSANIKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPTTATDDTNENYDHMAAAVAAAQTAALNMQIPPTSETPTPSLMCTTHHASTPAGATTHPTMGVMSFLDTRHMDFPASLHSMSRQRYIDAGTGSGAGAGTINVNPAAAAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01397556;
- 90% Identity
- iTF_01236810;
- 80% Identity
- iTF_00741986;