Basic Information

Gene Symbol
ct
Assembly
GCA_963681545.1
Location
OY813001.1:97561425-97586368[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.8e-27 1.2e-22 81.0 0.0 3 72 636 706 634 711 0.94
2 3 7.3e-32 1.1e-27 97.1 0.0 3 77 1065 1140 1063 1142 0.96
3 3 7.5e-31 1.1e-26 93.9 0.0 3 77 1319 1394 1317 1396 0.96

Sequence Information

Coding Sequence
ATGATTATTATGGCAGAGTATTTTGATGACGTCTCTGCTGCTGATGTTGCAGTCCTTATTTTTGCTACGAATACAACAATGATAATATGGCGGATTAAAGCCTTATTTGAGGAAGTAAAACGTTTAAGAAGCGTTGAACAAACccatttaatacaaattcatcgtttagaagaacatttgGAAGCCAAACGCCAGCATATTATGCATTTGGAATCTAAGCTAGATAAACAGCAAATCAATGAAGCTTTACAAGAAtcccaaaaacaacaacaacaaacgcaACAACGAGAAGATGATCTTAGCAAAGACTGTGAAATGTTGGAGGTCAATGAAACAGCTAACCGAGAGGACGACGAAGATGATAATGAAGTTGAGGAAGTTGTTAAAGATAGAAACTGTGATTTAACGCCACAACGGAATGAGAAACAACGAGACGGAGATGAAGATGATGATGGTGAAGAGAATATtaaccaaaatgaaaataatcagAACTCTGACGACATAGAAGAGTGTACAAATATTAAAGATTCTCTTACAGATTTGCAAATCAAAAAGGAAACTCAATCGCCTTTATCACTAGACTCAATTAGCCAACAAAATGCCATTGCTGCAGCAGCTGCTGCCGCCGCTGCCTGCAATAATGATCCCAACAAATTCCAGGAACTATTAATGGAACGCACCAAAGCTTTGGTAGCCGCTGAAGCTTTAAAGAATACCGAagAATCTAATGTAGTTAACGAAGAGCCACAGCGTTTAgatacaaatgaaaatgttgctAACTCAAGTAAGAATAATAATGAAGATGTTGTTGAGGAACATGTTGAAGCGTCAAAAGTGCCAAAAATTGAAATActagatgatgatgatgaagatgaaGAAGATGAAAATCCAAAATCGAACACAGATGATGCAGCCAAAGCGGACCTATGCTCCAGaatagatttaaatatattggatACAACAGCGCCAACGGCGGAAAAGCCATTGATAGAAGATGAAGATTCCGCAACATTTAAGCAAAATGTTGAACGTTTTGGCACTTTGTTGGGTGAAGAATTGGTAAATTCCTATTGGCGTAGAGGTTTTGATCATACAAAATCTTTGTATGCACAACAAacccaacaacaacagcagcagcaacaacaacaacaacaacaacaaaatttgcaacagcaacaacaacagcgctctttgcagcagcagcaacagcatcaCCAACATCATCAGCATTTAATGCTGCAGCAGGCTAACGTCCATCATCATCACCAATCGCCAATACAACATCACCATCAACAGCCTAACCAAACGCATTTATCACAGCCACCCTGTGGTCCTTCTTCGACCACCTTGCTTAGTCAATTAGTTAATTCTACTTTTTCCACTCCCAACTCTAATACTTCAACTCAATCCTCTTTACGTTCTGCAGATGGTTTTACACACTCGCAACCTGCTTCGCATCATCATCACCAGCATCACCACCTGCACCATCAAATGCCTGCCCACTTGGCCGAGCATCATGATAAGTCGTCACTGAATCATCACGATTCGTCGGCTTCCAGTGCCAGTACACCCAACTTGCAGGAACAACGCAGCAATGAGGATCATCACAGTTTATCTTTAAATGGTTCTCTCAAAAATTTGGAGGATAATAACAATAGCTTATGCGCTACACCCACCAGTCACCACATGGCAGCTGGTCATCCCCCACATTTGCCTCATGGCTTTTTGCCCGGCTTACCATTCCAATTCCAAGAACGTAGCCACTTTCGGTTTGCTGACGATTTGCAACTACCTCCCGGCACTTCTATGGCTGGCCGCTTGGGCGAGTCCTTAATACCTAAAGGGGATCCCATGGAGGCCAAGTTGCAGGAAATGCTGCGCTACAATATGGACAAATATGCCAATCAAGCTTTGGATACTTTACACATTTCAAGGCGCGTCCGCGAACTTTTATCGGTGCACAATATAGGCCAACGTATAttcgcaaaatatattttgggtcTATCGCAGGGCACAGTCTCCGAGTTGCTGTCAAAGCCGAAACCCTGGGATAAGTTAACCGAGAAGGGGCGTGACAGTTACCGCAAAATGCATGCCTGGTCTTGTGATGATAACGCTGTTATGCTGCTTAAGTCCTTAATACCCAAAAAAGaCTCTGGTTTACCTCCTTATGGCAGCGGTGGCCGCGATGATTCAATGTCTGATGAACGTATAGCTCATATTTTAAATGAAGCTTCTTCGTTAATGAAATCATCTGGTCCCTCATCGATGCATCAACAGCATGAACATCAGCGAAGAGCTTCTACTATACCAGAAGATTCACGTAGCAATGATGATTCCAAGTCACCGCATCCACCCTGCTCATCGCCATTTTTCAAAGAGCATCACAGCAAGTCCCAGGGAGAAACGGTGATGCCCGGTCAAAGTCATATGCGTAACGACGAGATGAATCCCGAGAAAATGGCAAGATTATATCAAGAGCTAATGGCCAGAGCTCCACGTGAAGCTTTCCCAGGatttttgctGTCTCCCTTCTTCAGCGGTGGTCTGCCTACAGCTACCGGCATTGGTGCCAATGCCTTTCCTGGCTTGGCAGCCGATGAAAATATGCGGATGGCTTTTGAGCGTGAAATGTCCAAattgcaacagcagcaacagcatgCTGCTGCTGCTCAACCGCCAAACTTTGCCAATTTCTCTAGTCTCATGGCCTTGCAGCAGCAAATGTTGAACGGCGCCCAGGATCTAACTTTGAGTACAGATGACAAACCCAAGGATAACAACAAAGTTAATGGCCAACGCAGTTCATTTGAGGGAACCCAAAACTCTCACAGCAATCATGGCCAGACAACGCCGAACGCCAAAGATTCTAGCACCTCAGAAGTGGAAAGACTTTACCCGGGCATGGTAAAATCAGAACAGGGCAGCAAAACTCCCGCTCCCTTGGCTTCAAGTAATGCTTCTACCACCAACACCAACTCGGCTGCACCCAGTCCTCTCAGCAACTCCATACTCCCGCCTGCTATGACGCCCAACGATGAATTCTCAGCCACCGCCAGCCCTCTACAAAGAATGGCCtctataacaaactctttgatAACGCAACCTCCTGTGCCACCTCATCATAATCCTCCACAGAGACCTACAAAAGCTGTCTTGCCTCCCATCACCCAACAGCAATTCGATATGTTCAACAATCTCAACACCGAAGACATTGTACGCCGTGTCAAAGAAGCTTTATCACAGTATTCCATATCGCAGCGTTTGTTTGGGGAATCTGTATTGGGTTTATCGCAGGGTTCGGTATCCGACCTCTTGGCCCGACCAAAGCCTTGGCATATGCTCACCCAAAAAGGCCGGGAGCCGTTTATTCGcatgaaaatgtttttggaaGATGAAAATGCGGTGCATAAACTAGTGGCTTCTCAATATAAAATTGCTCCCGAAAAGCTAATGCGAACAGGCAACTACAGCGGATCGCCCCAAATTCCTCAGGGCTTGGCCAACAAAATGCAGGCCTCACTGCCCATGCAAAAAATGATGAGTGAACTGAAGTTGCAAGAACCAGCTCACATTATGCAGCAAATGCAAGCCGCTGCCGTTATGTCAGCAGCCATgcaacaacatcagcaacagCAAGCGGCAGCAGTCCaacaaagccaacaacaagctgCTCAAGCGGCTGTGCAGGCTGCCCAAGCTGCAGCCGCTGCCCAGGCGGCCCAACAGCATCATCAGAATATGTTATTGACTTCGCCTGGTCTGCCTCCTCAGCACACAATTGCACTGCCCTCAGCCAGCTCTCAGCCAACATCGGGCAATAGCACTCCAGCTATCCCCACAACTGAGAAGAAGCCCATGATGATGCCTATACATTCACCCCACCAAGGCAATGCTATGCGCAATATGCACCAGCATATGTCACCCACCGTTTACGAAATGGCCGCTTTAACACAAGACTTGGACACTCAGGTTATCACCACGAAAATCAAGGAGGCGCTTTTGACCAACAACATTGGCCAGAAAATATTTGGTGAGGCTGTTCTGGGCTTGTCCCAAGGTTCGGTATCCGAACTATTAAGCAAACCCAAACCCTGGCATATGCTGTCTATCAAAGGACGTGAGCCTTTTATACGCATGCAGTTGTGGCTGTCGGATGCCAACAATGTAGAACGTCTACAGGTTTTAAAGAATGAACGACGGGAGGCATCGAAACGCCGACGTTCTACGGGACCCAATCAACAAGACAACAGTTCAGATACTTCGAGCAATGATACCAATGATTTTTACACCAGCAGTCCTGGGCCCGGCTCAGTGGGCAGCTCAGGAGCTCCTCCCAATAAGAAACAGCGAGTCTTATTCTCCGAGGAACAAAAGGAAGCCTTAAGACTAGCATTTGCCTTAGATCCTTATCCAAACGTAGGAACTATTGAATTTTTGGCCAACGAATTGGGCTTGGCAACACGCACTATAACTAATTGGTTCCACAATCATCGCATGCGTTTGAAACAGCAAGTGCCTCATGGTCCACCTGGGCAAGAAACCAATATACCCACTAGAGAAAACACCAATTCCACACCGTTCGATCCCGTCCAGTTCCGCATTCTATTGCAGCAAAGACTTTTGGAACTGCACAAGGAGCGCATGGGCTTGAGCGGTAATACACCCTTGCCCTATCCCCCTTACTTTGCAGCGGCCGCATTATTAGGCCGTTCATTAGCAGGCATGCCAGGCACCAATGCCCAAACCGCTTTGCCCACCAATGAGGCTGAACTAAGGGCTCTCAATCAAGCCTTTAGAGAGCAAATGTCCGGCTTAGATTTGTCTATGAGCTCTTTGAAACGTGAGCGAAGCGATGACTTCGAAGATGACATGGACGAAAGCCATATGTCGGAGAATGATAACGATGACATGGACGATGATGACAAAACTGGCGAGTACAGAAGCTCAGCCTTGTCTAGCATGAATGCCCAACAATTCTTGAATAATATGCGTTCGAATAGAAGAAAACCCGCCGCACCACAATGGGTTAATCCGGCCGTACCGAACGCCAACGAAGCCGAACGCATTATCAACGGTGTCTGCGTGATGCAGGCCGAGGGAGAAGCACAACAACAGACAGCTGTCAATGAAGAAGATCTACATAAATCTCTCGACCACGACGATAATGACATGATGGGAGCGCCCCATCAGTCAGTAATGGAACCCGAAGTAGTGATTAAGCAAGAAAAAGAAGACTGTGAAAGTGATAGTGAAAAGACAAACACTGAGGATGCCGCAGCGATGAGTGAAGAAAGAATAAAGGTGATACAAGAAGACAAGCTAAGAATGGTGCGTGTCAATCGTCTAAGCAACGAAGATGAAACAATAGTTGCAGCCAATAACAACGCACCACCAACAGCAACGtggaattattaa
Protein Sequence
MIIMAEYFDDVSAADVAVLIFATNTTMIIWRIKALFEEVKRLRSVEQTHLIQIHRLEEHLEAKRQHIMHLESKLDKQQINEALQESQKQQQQTQQREDDLSKDCEMLEVNETANREDDEDDNEVEEVVKDRNCDLTPQRNEKQRDGDEDDDGEENINQNENNQNSDDIEECTNIKDSLTDLQIKKETQSPLSLDSISQQNAIAAAAAAAAACNNDPNKFQELLMERTKALVAAEALKNTEESNVVNEEPQRLDTNENVANSSKNNNEDVVEEHVEASKVPKIEILDDDDEDEEDENPKSNTDDAAKADLCSRIDLNILDTTAPTAEKPLIEDEDSATFKQNVERFGTLLGEELVNSYWRRGFDHTKSLYAQQTQQQQQQQQQQQQQQNLQQQQQQRSLQQQQQHHQHHQHLMLQQANVHHHHQSPIQHHHQQPNQTHLSQPPCGPSSTTLLSQLVNSTFSTPNSNTSTQSSLRSADGFTHSQPASHHHHQHHHLHHQMPAHLAEHHDKSSLNHHDSSASSASTPNLQEQRSNEDHHSLSLNGSLKNLEDNNNSLCATPTSHHMAAGHPPHLPHGFLPGLPFQFQERSHFRFADDLQLPPGTSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDDNAVMLLKSLIPKKDSGLPPYGSGGRDDSMSDERIAHILNEASSLMKSSGPSSMHQQHEHQRRASTIPEDSRSNDDSKSPHPPCSSPFFKEHHSKSQGETVMPGQSHMRNDEMNPEKMARLYQELMARAPREAFPGFLLSPFFSGGLPTATGIGANAFPGLAADENMRMAFEREMSKLQQQQQHAAAAQPPNFANFSSLMALQQQMLNGAQDLTLSTDDKPKDNNKVNGQRSSFEGTQNSHSNHGQTTPNAKDSSTSEVERLYPGMVKSEQGSKTPAPLASSNASTTNTNSAAPSPLSNSILPPAMTPNDEFSATASPLQRMASITNSLITQPPVPPHHNPPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGSPQIPQGLANKMQASLPMQKMMSELKLQEPAHIMQQMQAAAVMSAAMQQHQQQQAAAVQQSQQQAAQAAVQAAQAAAAAQAAQQHHQNMLLTSPGLPPQHTIALPSASSQPTSGNSTPAIPTTEKKPMMMPIHSPHQGNAMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGQETNIPTRENTNSTPFDPVQFRILLQQRLLELHKERMGLSGNTPLPYPPYFAAAALLGRSLAGMPGTNAQTALPTNEAELRALNQAFREQMSGLDLSMSSLKRERSDDFEDDMDESHMSENDNDDMDDDDKTGEYRSSALSSMNAQQFLNNMRSNRRKPAAPQWVNPAVPNANEAERIINGVCVMQAEGEAQQQTAVNEEDLHKSLDHDDNDMMGAPHQSVMEPEVVIKQEKEDCESDSEKTNTEDAAAMSEERIKVIQEDKLRMVRVNRLSNEDETIVAANNNAPPTATWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01109239;
90% Identity
iTF_00759983;
80% Identity
iTF_00741736;