Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963681545.1
Location
OY812999.1:113752301-113757742[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5e-26 3.2e-22 80.0 0.1 2 89 204 287 203 287 0.95

Sequence Information

Coding Sequence
ATGTCAACAAAGATATCAGCGACAGCCGATAgcagtagtagtagtaatagtaCTACCGCAAGCCCATCAGCAAGTTCGTCTATGTCTGCAGCAGCAAATGGTTCCACAACCCCAGTCAGACGCCTTCGCACTAGAACCTCAACGGGTGGCAATGTAAGCGGTGGTGAATCAGCtcaaaagaaatatggaccgatttcTGAGAAGAGCAGTGAGTCGATTTCTAACGCATCCGGCATGACTGCAGGGAATGAAGAGAAGCCAAGTGCAAGTAAAAAATACCACAACAGTTGTCCTCAGCCGCCGACAAGCTCTGGGCGAAAAGAAAAGAATCATTCACAACCCCACAGCTCCAGCACTTTTAACATGAATAAAACAGAAGAGTTTAACTTTGATACACCGCTAGAGTGTCCAGTTTTTCGACCCACGCCCGACGAATTTAAAAATCCGTTAGCATATATCAGCAAGATACGACCGATCGCTGAGAAATGTGGTATTGCCAAGATTTTACCTCCAGAGTCTTGGTCGCCTCCTTTTGCGGTGGACGTCGACAAGTTGAAATTTACACCACGCGTTCAACGTCTTAATGAATTAGAAGCTAAAACACGAGTAAAACTAAACTTTCTTGATCAAATAGCGAAATTTTGGGAATTGCAAGGATCTTCCCTGAAAATTCCTATGGTTGAAAGGAAGGCTTTAGATCTTTACACATTGCACCGCGTAGTACAAGAGGAGGGGGGTGTGGAACAAACTACCAGGGAACGTAAATGGGCAAAAGTGGCAAATCGTATGTCTTACCCCACCAGCAAGAGCGTTGGTGCTACTCTCAAAGCACACTATGAGCGGATCCTACATCCTTTTGAAGTATATACTTCGGGAAAAGTTTTAGGACAGGGTAATGCTGGTGCAGCCGTATCAAATCCAGATGTGAAACTGGAAGATGGCACCGATTACAAAGCCCATGAGATTCCAACACGTCAACAAATCGCCCCACCTAACGAGACAAATGCCAGGCGTTCCAAACGATTTGCAAATTCAAGTGCCAGCTGTGGCTTAGGAATTAATCGTAGCGGTGTGAAGACAGAAACAAAGGAAGACTTTAAGAGAGATTTGTTGAGTTGTTTTAATGCTTCAGCAGCTTCAGCCGCTTCAGCCGCTAGCCGCACAAATTCCAGCAATAGCATCACGGGATCTACTCAGAAAAAAGCCCCGGATCCTAATGTTGCAGTGGACCCTCTTATGAAGTACATTTGTCACATTTGCAACCGTGGAGATGTTGAAGAATCAATGCTCTTGTGCGATGGTTGTGATGACTCATATCACACCTTCTGTTTGTTGCCGCCTTTGTCAACTATACCAAAAGGTGAATGGCTATGCCCACGTTGTGTCGTAGAGGAGGTAAGCAAGCCAACAGAAGCCTTTGGATTTGAACAGGCTGAACGTGAATACACCTTGCAACAATTTGGGCAAATGGCAGATCAATTTAAAATGGACTATTTTCGCAAACCAGTGCACTTGGTGCCAACAGATCTTGTGGAACGGGAATTCTGGCGTATTGTTTCATCAATTGACGAGGATGTTACTGTGGAATATGGCGCAGACCTACATACGATGGACCATGGTTCCGGTTTCCCAACAAAAAGTTCACTCTATCTATTGCCAGGTGACCAAGAATACGCTGAGTCTAGCTggaatttaaacaatttgccTTTGTTGGAAGACTCCATACTAGGCCATATAAATGCGGACATTAGTGGTATGAATGCTCCCTGGATGTATGTAGGCATGTGTTTCGCCGCATTTTGTTGGCATAATGAAGACCACTGGAGTtattctataaattatttacattggGGTGAACCTAAAACGTGGTATGGCGTGCCGGGCAGTTGTGCCGAACAATTCGAGGAAACCATGAAACAGGCTGCTCCTGAATTATTTGCCTCTCAACCAGATCTGTTGCATCAGCTGGTAACAATAATGAATCCAAACATATTAATGAACAATGGAGTGCCGGTTTATCGTACTGACCAAAATGCTGGCGAATTCGTGATAACATTTCCTCGTGCTTATCATGCTGGCTTTAATCAAGGCTATAATTTCGCGGAAGCAGTTAATTTCGCTCCAGCAGATTGGCTGAAAATGGGCCGAGAATGTATAAATCACTACTCAATGTTACGTCGTTTCTGCGTGTTTTCGCACGATGAACTTGTGTGCAAGATGGCTCTTGAGCCCGCAAAGCTCACATTTGGCATAGCAACAGCTTGCTATATTGATATGGCTGAAATGGTagattccgaaaaaaaattacgtaaatCGTTACTTGAATGGGGTGTCACAAAAGCGGAGCGTAAAGCGTTTGAATTGATACCGGACGATGAACGTCACTGTCAAGAGTGCAATACAACATGTTTCCTTTCTGCCGTTTCTTGTGAATGCACAAAGACAATTGTTTGCTTACGTCATTACACTGTTTTATGCACATGTCCACCCGATAAACATACACTTTTATATCGTTATACACTTGATGAGATGCCGCTAATGCTACAAAAACTCAAATCTAAGGCCCAAAGTTTTGAAAGATGGTTATCACGTTGTCGGGACATCGTGGATGCCAATACACCAACGTCCGTGACCCTGCAAGAACTTCAAGAGCTGTGCAAAGAGGCTGAAGTCAAAAAGTTTCCGTCGTCTCTACTTATTGATCGTCTAAATGCTGCAGTTTTAGAAGCAGAAAAATGCGTGACCGTTATTCAACAATTGGGAATCAATAAGgtaCGCACTCGTTCTGATAACAATTTAGAAGCAGCGCAGTACAAACTTACAATGGAGGAACTTGAACTTTTTGTACAGGAAATCGACAATCTTTGCTGCACCATTGAGGAGGGAGCGTCAGTGCGTGAACTTTTAGTTCTGGGTAAACAATTTGTGGAACGAACcactgaaatattaaaaaatccctTAGATGCTCTAGAAGAAGCTGAGGTCGAAGCAATCATCGACGAAGGCAACTCATTACGCATAGAGCTTCCTCAAATGCAACAGTTAAACATGCGACTTAAACAGTTAAAATGGTACAAACGATCACAGGGTCTAAGAGATGCCAGTGCGAAACTTACGTATgatgatgttaaaaatttattacatgtaGCAGCAGCTGAAATTGCACCTACAGATCCGATTATAGATGCGGAAATAAGAAAACTACAAGAAATCGGCGCTTCCATAGAAGCATGGGAATgccaagcaaataaatattttaattgcagcACGCAACGGCATGAGCTGGTAGAAATTGAACAGTTTCTTAAAACAGCTACGGAGATTGAGGGACAAGTTCCTTCTTATGGTATGCTCAAGGATGCTTTGCGAAAGGCAAAAGAATGGTTACGATCCGTTGAACAACTTCAAGCTAATGACCACTTTCCATACTGCCACACGTTAGAAGCAATTGTTACGCGTGGATCTAGTATTCCGATAAAACTGGAAGAGCTGTTGCGCATGCAAGGCCATCTAAAAAGTGCCCATGATTGGAAAGAGAACACTGAGCgagcatttttaaagaaaagtacttTCTATACTCTTCTAGAGGTTCTAATGCCTAGGGCTGAGGCGGTTATTATAGACTCTGATCTGAAGAAACCATTCGAGGATGATTTCGTTAAAGAAATGAATCCCGCACAAATCGTAGACTCATTTAAGGTAGCAGAAGAACAAGAACTTCGTGATATGCGAGAGCTCAGAAGACAAAATATGACTAAAAATCCGCTGCGTGATGATTATTGTCTCTGTAAGTCATCTTTCCAAGGCGTAATGTACAACTGTCAATTATGCAGAGATTGGTTCCATGAGGATTGTGTGCCGCCACCACtacaaatgcaaacaaattgtGTGTTGGATGAAGGTATTAAATTGAAGTGGTTATGTCCCTCCTGTGTACGTTCAAAGAGACCACGCCTTGAAACAATTCTACCATTACTTGTTTCTCTTCAAACGTTACCAATACGCTTGCCCGAAGATGAAGCTCTTCGCTGCCTTGCCGAAAGGGCCATGAATTGGCAGGATCGAGCTCGAAAAGCCCTCACAAGTCCTGACGTGACAGCAGCATTAGAAATTATAACTACAGCAGCCcaacaaagaaacaaacaaaagaaacgTAAGGGAGCCAATAATATTGGATCAACTCGGAAGCCAAGGCGTAGCAGTCAAAGAAACTCTAAAGACGATGGCTCAGATAATGCCGATTCAGATGATGAGGGACGCTTACACATTGTCGAGGAAAACTTTAGTAATGATGAAGAGGAAGACTGTGAAGCGAACCCAACGAATGAAAACACAAACACTCATAATAGCATTCAGCTACAGAAATTATTGTCGGACAGCGAGACAGATAATCTCGAGGAACTGATGATGGAAGGTGACCTGCTCGAAGTATCTCTCGATGAATCAAAAGAGCTCTGGCGGGTTCTTTCCGCAGTACAACCTGCGCATCCTTCTGAAGCGGCTGCTCTAGTCGAGCAGCATCAATCCCtgataaaacaacaaaaccagCAGAACCAACAACCGACTTCCAGTGTTAATTCCGCTGCCGAAGATTCAAACGATAGTTTAATGGTACAGAGTAGTCCCAACAGCACTAGTAACAGCGGGAGCGGTAATGGTCGCGGCTCATCCAATTCGATAAAAAAACGTAGATCACTCGATCCAACAACGGGATGTCCTGTACCACGAAAGAAAATCGCCACACCgaacaaacaaaacttttcaaCTGGGTCAAATACGACATCGGGGAAAAAGTCCGCGAGAAAATCAGATGCCAACAGTAAAATATTGGGCTCTGCAGATGAAAATACGGAGAACTATACACCCAGCAAGCAATCAAATGGCGGTTCTCAAAATCAATCGaataacaacagcaatgcaGCTTCAGGATCGCAGAAAAAGCATAGGAAACGTGTTGGTGGGAACAGTAGCAGCAATACAAACGTTTCGGCTAGTCAAAAGAAGAACTCTCAAAGAGCTCAAATGGCCCAGCAGGAGGACGATGAAGAGGAATGTCGCGCTGAAAACTGCCACAAGCCGACGGGCCGTGAAGTTGACTGGGTACAATGTGACGGCGGTTGCAACGAGTGGTTTCACATGTACTGTGTTGGTCTCAATCGTAGCCAAATCAAGGCCGATGATGACTACATTTGCATACGTTGTTCGAAGAATGTAACAGTAACCACCACAGGTGGCAGCACTGGCATAGCTTCGGCTGTACCAACACAACAAAAAGGGCGCTCTCAAACGACGCGATAA
Protein Sequence
MSTKISATADSSSSSNSTTASPSASSSMSAAANGSTTPVRRLRTRTSTGGNVSGGESAQKKYGPISEKSSESISNASGMTAGNEEKPSASKKYHNSCPQPPTSSGRKEKNHSQPHSSSTFNMNKTEEFNFDTPLECPVFRPTPDEFKNPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRVVQEEGGVEQTTRERKWAKVANRMSYPTSKSVGATLKAHYERILHPFEVYTSGKVLGQGNAGAAVSNPDVKLEDGTDYKAHEIPTRQQIAPPNETNARRSKRFANSSASCGLGINRSGVKTETKEDFKRDLLSCFNASAASAASAASRTNSSNSITGSTQKKAPDPNVAVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSTIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKMDYFRKPVHLVPTDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECINHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTKAERKAFELIPDDERHCQECNTTCFLSAVSCECTKTIVCLRHYTVLCTCPPDKHTLLYRYTLDEMPLMLQKLKSKAQSFERWLSRCRDIVDANTPTSVTLQELQELCKEAEVKKFPSSLLIDRLNAAVLEAEKCVTVIQQLGINKVRTRSDNNLEAAQYKLTMEELELFVQEIDNLCCTIEEGASVRELLVLGKQFVERTTEILKNPLDALEEAEVEAIIDEGNSLRIELPQMQQLNMRLKQLKWYKRSQGLRDASAKLTYDDVKNLLHVAAAEIAPTDPIIDAEIRKLQEIGASIEAWECQANKYFNCSTQRHELVEIEQFLKTATEIEGQVPSYGMLKDALRKAKEWLRSVEQLQANDHFPYCHTLEAIVTRGSSIPIKLEELLRMQGHLKSAHDWKENTERAFLKKSTFYTLLEVLMPRAEAVIIDSDLKKPFEDDFVKEMNPAQIVDSFKVAEEQELRDMRELRRQNMTKNPLRDDYCLCKSSFQGVMYNCQLCRDWFHEDCVPPPLQMQTNCVLDEGIKLKWLCPSCVRSKRPRLETILPLLVSLQTLPIRLPEDEALRCLAERAMNWQDRARKALTSPDVTAALEIITTAAQQRNKQKKRKGANNIGSTRKPRRSSQRNSKDDGSDNADSDDEGRLHIVEENFSNDEEEDCEANPTNENTNTHNSIQLQKLLSDSETDNLEELMMEGDLLEVSLDESKELWRVLSAVQPAHPSEAAALVEQHQSLIKQQNQQNQQPTSSVNSAAEDSNDSLMVQSSPNSTSNSGSGNGRGSSNSIKKRRSLDPTTGCPVPRKKIATPNKQNFSTGSNTTSGKKSARKSDANSKILGSADENTENYTPSKQSNGGSQNQSNNNSNAASGSQKKHRKRVGGNSSSNTNVSASQKKNSQRAQMAQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKNVTVTTTGGSTGIASAVPTQQKGRSQTTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01235504;
90% Identity
iTF_00899304;
80% Identity
-