Gspi020365.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Geotrupes spiniger
Gene Symbol
nfxl1
Assembly
GCA_959613385.1
Location
OY390736.1:26290748-26293996[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 3.8e+04 -5.0 1.9 15 19 164 168 164 168 0.85
2 18 0.22 4.1e+03 -1.0 0.8 4 10 199 205 198 205 0.94
3 18 2.5e-07 0.0048 17.9 17.2 1 19 213 230 213 230 0.99
4 18 3.2e-09 6e-05 24.0 13.0 1 18 266 283 266 284 0.98
5 18 1.9e-06 0.035 15.1 15.6 1 18 319 336 319 337 0.97
6 18 2.4e-05 0.46 11.6 12.8 1 18 372 389 372 390 0.98
7 18 1.2 2.3e+04 -3.4 0.2 1 5 399 403 399 403 0.92
8 18 5.5e-05 1 10.5 17.1 1 18 424 441 424 442 0.94
9 18 9.7e-09 0.00018 22.5 14.2 1 18 451 468 451 469 0.97
10 18 0.74 1.4e+04 -2.7 1.3 5 10 497 502 497 502 0.91
11 18 0.00042 8 7.6 5.6 9 19 517 527 515 527 0.90
12 18 0.81 1.5e+04 -2.9 7.8 3 12 538 547 530 547 0.82
13 18 1.9 3.6e+04 -4.0 3.5 14 18 575 579 575 580 0.87
14 18 2.5e-05 0.47 11.6 4.3 1 12 616 627 616 627 0.96
15 18 2 3.8e+04 -5.2 5.0 9 13 643 647 641 648 0.80
16 18 0.0037 70 4.6 16.6 4 19 658 673 656 673 0.91
17 18 2.5e-06 0.047 14.7 12.2 1 18 716 735 716 736 0.86
18 18 1.1 2e+04 -3.2 0.4 5 10 765 770 765 770 0.88

Sequence Information

Coding Sequence
ATGAGCGGAAAACAAGCGCCGAAACCGAGAAATCCATGGACGATATCCGAACAATCGCCCCGAAAATCTGCGAAATCGAAAACAACTAACCTAAAAAACTCCGAAAACAAATTCATAGAAGCTTCGAACAGGTTAAAAGCGGCTGCTCAAAAGCACACCAAAGATTACGAATCGTCGTCCGAAGAAGAGGAACTAGAATCGCAAAATGTTATAGATAAAATATTGAGTCATTATGACAGTACCGGGGCGAACGTGGAAAACTTGGGACGAACTAAAGGATTTTTGGAAGATTCCTTCGTATCGGGCGCTGCCAcgtgtttaatttgcatttctaGTATAAAACGAAACGATTCGATATGGAGCTGCACGTCGTGTTATTGCTTTTTTCACTTGATGTGCATACAGCGATGGGCAAAAGACACGTTGACACATCAGAAGCTAGCATTGGAGGGGCCGATAGTAGTGCGACAGATAAAAATCGGTTGGGGTTGCCCAAAATGCAGGCATGATTATGGATCAGGAGATGTTCCTACACAGTATTTTTGCTTCTGTACCAAAACGGTCAATCCAATCTTTCAGTCGCTTCTGATACCGCATTCTTGTGGGGAGAAGTGTGGAAAAGATTTAAAACCATTGTGTGGACATGAATGTGTGCTACTTTGTCATCcaggGCCATGTCCACCGTGTCCAAAAACtgttaatgttaaatgttaCTGCGGGAATCGTCCACCCAAATTCCAAAGGTGCAGTAACAAGGAGTGGTCATGTGGCTCACCTTGCAATAAATTGCTGATGTGTAGCAAGCACAAATGTGCCCAGCCGTGTCATGCAGGTGATTGCCAACCATGTGCAAAGAAAAgcattcaaaaatgtttgtgtggTTTAACCCAAAAACTCAGGGATTGCACAACACCAATGTGGCAATGCGAAACTATATGTGGGAAACCTCTTAAATGTGGTCATCATTCATGCCCTGAAATTTGCCATATTGGGCAATGTGATCAATGTGAATTATCCAAAACTCGTACTTGCTCATGCGGAAAATCTTCATATAATTTGCCTTGTACTGAAGAGACTCCTAATTGTGGTGACACATGCGGAAGAATCTTAGAATGCGGCCAACATGTTTGTAACCAAAGATGCCACAAAGACAAATGTGGAACTtgTGTAGAAACTGTAACGAAGTCCTGTCGATGTGGATGGCATACAAAGGAGGTGCAATGCAAAAAACCTTATCTTTGTGACACTAAATGCAAGCAAATGAAAGATTGTAATAAGCATCCATGTAATCGAAAGTGTTGTGATGGTAATTGCCCACCATGTGAAAAACCTTGTGGTCGCACTTTAAGTTGCAGTAATCATAAATGTAACTCCATCTGCCATCGAGGACCATGTTATCCATGTCATTTAACAGAAAAGGTTTATTGTCGTTGTGGGGGCACATTTGTAATCGTGCCTTGCGGACGAAAACACAAGACAAGGCCTCCAAAATGTAGCAAACCTTGTTTGATACCCCCAGATTGCCACCACTCTCAACGTGAAAACCATAAATGTCATTTTGGTACTTGCCCCCCTTGTAGGCAGATATGCGGTAAAACACATCCACGCTGCTATCACACATGTCCGATTTGGTGTCACTCGGCTGTGTTAGTTAAAATTGAAGGCAAACAAGCCTCTATGCCATGGGAGGAAACTGGGCCACAGCTTGAAATGAAGGATCTTCCATGTCCAAATTGCGAAGTTCCTATTTCAGTCACCTGCCTTGGAGGACATGAAACAACCGACTGGAAATGTTTTGAAGCAACACCATCGAGTTGTGGCAGAAATTGTGGACGTATTTTGTCTTGCGGCAATCATGTCTGTATGGCAGTTTGTCACACTGTTGTGGGAGCTATCGACGACGTAAAGGCTGGCGAAAATTGTGATGTTTGCCACGGTGGTTGCGAAAAACCCAGGCCTGAAGGTTGCACCCATATTTGCCCAAAACCTTGCCACCCAAATTCGTGTCCTCCGTGCAAACAAATGTTACGCATCAGATGTCACTGCGGCCTGAATCAGCCATACGTCGCCTGTAAAGATTGGATATTAtacgaaaataaagaaaatctgCAAAGCTGTGGAAATCAATGTCCAAATAatTATGAATGTGGCCACCGCTGTCGTTCCAATTGCCATTCTGGCCCATGCCCAAACGCAGACCAGTGCAAAAAGAAAGTCAAAGTGTATTGTTCGTGCAAACGATTAAAGAAGGAATTCTCATGTGAGACGGTCAGGAAGGGCGAAGCCAAAGTCAACTGCGATGAAATATGTGAGCAAAAaactgaagaagaaaaaaaggtgAAGGAAATCGAAGACGAGCAAAGGAAAaaggaagaggagaagaggaacCAGATTGAACTTGCGAAGTTCGAGAAGAAGTTCCATGGgaagaagaaatacaaagaaCGTAAGGTGCAAGACGAGACCAACGAAGCAAACTTTTTGCGAAGGCATGCGTTTCCAATTTCGTTTATCACTGCAGTTATCATATCAggcgttatattttattttatgtag
Protein Sequence
MSGKQAPKPRNPWTISEQSPRKSAKSKTTNLKNSENKFIEASNRLKAAAQKHTKDYESSSEEEELESQNVIDKILSHYDSTGANVENLGRTKGFLEDSFVSGAATCLICISSIKRNDSIWSCTSCYCFFHLMCIQRWAKDTLTHQKLALEGPIVVRQIKIGWGCPKCRHDYGSGDVPTQYFCFCTKTVNPIFQSLLIPHSCGEKCGKDLKPLCGHECVLLCHPGPCPPCPKTVNVKCYCGNRPPKFQRCSNKEWSCGSPCNKLLMCSKHKCAQPCHAGDCQPCAKKSIQKCLCGLTQKLRDCTTPMWQCETICGKPLKCGHHSCPEICHIGQCDQCELSKTRTCSCGKSSYNLPCTEETPNCGDTCGRILECGQHVCNQRCHKDKCGTCVETVTKSCRCGWHTKEVQCKKPYLCDTKCKQMKDCNKHPCNRKCCDGNCPPCEKPCGRTLSCSNHKCNSICHRGPCYPCHLTEKVYCRCGGTFVIVPCGRKHKTRPPKCSKPCLIPPDCHHSQRENHKCHFGTCPPCRQICGKTHPRCYHTCPIWCHSAVLVKIEGKQASMPWEETGPQLEMKDLPCPNCEVPISVTCLGGHETTDWKCFEATPSSCGRNCGRILSCGNHVCMAVCHTVVGAIDDVKAGENCDVCHGGCEKPRPEGCTHICPKPCHPNSCPPCKQMLRIRCHCGLNQPYVACKDWILYENKENLQSCGNQCPNNYECGHRCRSNCHSGPCPNADQCKKKVKVYCSCKRLKKEFSCETVRKGEAKVNCDEICEQKTEEEKKVKEIEDEQRKKEEEKRNQIELAKFEKKFHGKKKYKERKVQDETNEANFLRRHAFPISFITAVIISGVIFYFM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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