Basic Information

Insect: Geotrupes spiniger
Gene Symbol: -
Assembly: GCA_959613385.1
Location: OY390733.1:13835135-13844168[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 1.5 1e+02 4.7 1.3 1 14 139 151 139 161 0.71

2 26 0.23 16 7.2 0.1 1 20 215 234 215 236 0.93

3 26 1.1e-05 0.00077 20.8 0.2 1 23 351 373 351 373 0.97

4 26 0.00057 0.04 15.4 0.2 3 23 378 398 377 398 0.94

5 26 0.66 47 5.7 0.2 2 23 424 445 423 445 0.95

6 26 0.37 26 6.5 0.5 1 20 452 471 452 473 0.93

7 26 0.045 3.2 9.4 0.3 2 21 537 556 536 557 0.91

8 26 1.6 1.1e+02 4.5 1.4 1 23 559 581 559 581 0.89

9 26 0.0054 0.38 12.3 0.6 2 23 588 609 587 609 0.97

10 26 0.0064 0.45 12.1 0.2 3 23 614 635 613 635 0.96

11 26 0.54 38 6.0 0.4 2 23 683 704 683 704 0.96

12 26 0.67 47 5.7 0.8 1 23 738 761 738 761 0.94

13 26 0.16 11 7.7 3.4 3 23 771 792 770 792 0.97

14 26 0.0014 0.098 14.2 1.5 2 23 794 815 794 815 0.98

15 26 0.00029 0.021 16.3 5.4 2 23 823 845 822 845 0.93

16 26 0.39 28 6.5 11.0 2 23 848 869 847 869 0.96

17 26 0.19 14 7.4 4.5 2 23 875 897 874 897 0.86

18 26 0.017 1.2 10.7 9.5 1 23 1041 1064 1041 1064 0.96

19 26 0.39 27 6.5 0.9 1 10 1119 1128 1119 1132 0.92

20 26 0.0054 0.38 12.3 0.5 2 23 1221 1242 1220 1242 0.97

21 26 0.011 0.75 11.4 0.2 2 21 1250 1269 1249 1270 0.93

22 26 0.46 32 6.3 2.8 1 23 1272 1294 1272 1294 0.96

23 26 0.00047 0.033 15.7 3.8 1 23 1300 1323 1300 1323 0.97

24 26 3.4 2.4e+02 3.5 0.8 2 19 1340 1357 1339 1360 0.75

25 26 4.5 3.2e+02 3.1 0.1 1 12 1362 1373 1362 1376 0.79

26 26 0.0012 0.087 14.3 1.0 2 23 1395 1416 1395 1416 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	1.5	1e+02	4.7	1.3	1	14	139	151	139	161	0.71
2	26	0.23	16	7.2	0.1	1	20	215	234	215	236	0.93
3	26	1.1e-05	0.00077	20.8	0.2	1	23	351	373	351	373	0.97
4	26	0.00057	0.04	15.4	0.2	3	23	378	398	377	398	0.94
5	26	0.66	47	5.7	0.2	2	23	424	445	423	445	0.95
6	26	0.37	26	6.5	0.5	1	20	452	471	452	473	0.93
7	26	0.045	3.2	9.4	0.3	2	21	537	556	536	557	0.91
8	26	1.6	1.1e+02	4.5	1.4	1	23	559	581	559	581	0.89
9	26	0.0054	0.38	12.3	0.6	2	23	588	609	587	609	0.97
10	26	0.0064	0.45	12.1	0.2	3	23	614	635	613	635	0.96
11	26	0.54	38	6.0	0.4	2	23	683	704	683	704	0.96
12	26	0.67	47	5.7	0.8	1	23	738	761	738	761	0.94
13	26	0.16	11	7.7	3.4	3	23	771	792	770	792	0.97
14	26	0.0014	0.098	14.2	1.5	2	23	794	815	794	815	0.98
15	26	0.00029	0.021	16.3	5.4	2	23	823	845	822	845	0.93
16	26	0.39	28	6.5	11.0	2	23	848	869	847	869	0.96
17	26	0.19	14	7.4	4.5	2	23	875	897	874	897	0.86
18	26	0.017	1.2	10.7	9.5	1	23	1041	1064	1041	1064	0.96
19	26	0.39	27	6.5	0.9	1	10	1119	1128	1119	1132	0.92
20	26	0.0054	0.38	12.3	0.5	2	23	1221	1242	1220	1242	0.97
21	26	0.011	0.75	11.4	0.2	2	21	1250	1269	1249	1270	0.93
22	26	0.46	32	6.3	2.8	1	23	1272	1294	1272	1294	0.96
23	26	0.00047	0.033	15.7	3.8	1	23	1300	1323	1300	1323	0.97
24	26	3.4	2.4e+02	3.5	0.8	2	19	1340	1357	1339	1360	0.75
25	26	4.5	3.2e+02	3.1	0.1	1	12	1362	1373	1362	1376	0.79
26	26	0.0012	0.087	14.3	1.0	2	23	1395	1416	1395	1416	0.97

Sequence Information

Coding Sequence: ATGTCGTTGAAGTTTTGTAGGGTTTGCGCGACGGAGGGTACGAACCTGACTGAAATGGGCAGTGGGGTAAATTCCTGCGGGAAAAAATTGGCTGCGTGTATACCGGAGATAgATTTATATCTAGTTGAAGACCCAGTTATATGCAAAACATGTTCTCACATGGTGGATGTAGCTTATACCCTGAGAGAGGTGTGCTTGAGGAACGAGAAACGTCTCACTGTGAGCCTTGAAAATCACCTCAGTCCGTCGAAACAACGTACTGCTGTGTCCACCGATGATGGTGACGATGCTGTGGTGTACGTCAGTGACGATGAATGCAATAACGTAAAAGTTACTGCGAGTAATCCCAAATCCGTTGTTAAAGATCAGAATTCGCACGTGGTAACTCCAAATGTAAACTGCTGTTCGTCGTCGTTTTATTGCAGCATTTGTGATCAGTCGTTCATAGGAGATTCCTTGGACTCGCACCATAAAGAGTTCCATTTGGGCGATACGAGAAGTGCTGATGTTGAAGCGAAAgttgcaattataaataaaataattgccagAAGAGTCAACATGTCAAATAATGTACCCACGCAGAGAATAAAACCCAAACGTAAAAGCACGTTACTCGATAATGTTTATGCGAAAAAGACAAGCTTTGAATGTAAAAACTGCAAGGCGACGTTTGATAGTGCGGTTGCATTTGGCAAACATGTTGAATTGAGAAATTGCCTGTCTGGCGAAAAAAACGGATTGATAACGAATAAAATTTCTGGCACCGACGATAGGCTGCACATACAACTAAAGTCTAAAATTTCTGGCATCGACGATGGATCGCACGTACAACTAAAGTCTCAAATTTCTGGCATCGTCAATGAGCTGCATGCAAAGTCTAAAATTTCTGGCACTGACAATGGGCAGCATGcagaaataaaatctaaaatttctgGCATCGACGATGGGCCGCACCTACAACTAAAGTCTAAAATTTCTGGCACCATCAATGAGCTGCAAGGAAAGTCTAAAATTTCTGGCACTGACAATGGCCTGCAGGTAGAAGTAAAGTACATTTGTGATGTATGCGGTGAATCTTTTGTCCATCCGAGTGATTTGGAACAGCATTCGTCAACCCACCTTAAAAATGCCTGTCAGCTGTGCGATAAAACCTTTGCTTCAAAAATCGAACTCGAAAAGCACGTGGAGTTCCACTTCACCAAGTGTTGCGATACTAAATTCCAAACGGGCTGCGCGATTCAGTTGCACACCTACTACCAACACGGCAAGTCTTGTGGAATATGCATGGAGAGCTTCGACACCTTCAATGCACTTTTCCAACATTTGGTGGTTCACGCGGATAAGAAACTCGATTTCCGTTGTATTGATTGCAATATCTCTTTCAACGACGAGGAGCAATACAGTGCTCATAGATGTGGGAAAGAGAGCGGTGAAGACGACACACCTAAGAGCAACGAATCGGATGTTACTTCAAAACAACCCACTTCTACGTCTGAGGACTGTGAAATATTGTGTCAATCGCAAGTCGAGTTGGACGATCAGGCGGGGACTCCACCGCAGtctgataaattaaaaaatgcggAACCTTCAGCTCCAACGCAGACTTGGACTTGCGAGGATTGCAAGAAAGTCTTCGATACGTTGATAACAATCACCGAACACCAGTGCGTgagttataattgtaaatattgtggtTATTTGTTTCTTTCAAAGTTCGTATACAATATACACTTGCTTCAACACAGCATTGAGAAAGACTCGCCCTGTAATTTGTGTTCGAGCAGGTTTACGTCAAAAGTTTCTTTGATTCTTCACTTGAAGAGTCATTATACAGAGATATGCCAAGTATGTTATCAGGCTTTCAAAACTGCGAAAGTGTTAACTCGTCACTACATCACAGTGCATTGCAAAATGTTGACTGTTGCTTTAGTAGATTATAAAAAGCACGGATTATCAGAGGTTTCGAAGAAGTATTTTTGTAGGGCATGCCACACTGAATATTGCTCATTACATAGTTTCCACACACATGTCCGAGAAACTCATGCATATTGCGAGGTATGCAATTGCACTATAACTAGAATTGATTATATGCTGGCTCACATCAACTGGCATGAGGATTGTGTGAGGCCGAAAGTACCACGAAATTGTCAAACTGCCAAAGCTTCAAATCAACGCGTGCCCGAATTAAGGTTGCAGATATCGAACACAGCTTATTTTTGTGAAACGTGCCAAGTTGAGTTCCAAGATAAAACGAAGTACGCCGACCACGTCCAGTACATGCACACCAAGCGGAACACATCCGCCGGTTTTTGTCAAATATGTGAAATTCATTTTAAGATGGAAAGCAAGTATTGCGATCACATGAAAATCGTACACCGGCAGTGCCACATGTGCGAAAAATCCTTCGACAACGGCATCCTGTTGTCGAGTCACATAAAAACGCACGAGCTGTCTCCTCCGAAAAAAAAATGCTCCCAATGTGACAAAAAATTCATCAACAAAACAAACCTTCAGAAACATATTTCGTTTTGTCACAAGATTGTTTGTCATATATGCAAGAAAACTTTCAAGCACTTGAATCATTTGAAGTGTCATTTTAGATCACACGTAAACAACAAAGTGAAGTGTAGTTTTTGTGATAAACATTTCAAAACCCAGAGTAACTGCGACTTACATGTTCAGTTAATGCACCCTCGATGTACAATAGAAGGCGATAGTGTGAACGATGATGACGAACATGTGCCTGTGGAAGAACACGTCAATGAACAAATAGTGGACAAATCATGTGGAATATGCAAAAATACGTTCGAAAAGCCGTTAATATGCAAATCGTGTTCGTATATGGTCGATGTTGCATACAATCTACGTGAAATGTGTTTGAAGAACGAAAAACGATTCAGCGTTGTTTCGAACGCACGAAGGAAATCGGGggataatataattattcagaAAAGTCTGGAGCCAGAATACCTGAACGATTGCATCGAGGATGTTAACAGGCAACTAATTGACCTTGACAATGATTTAATTGTCATGGGTAATGAAACTCCACAAAACCCCATTGAAGTCAAGTGTGGTGGTCTAGAAAAACCCAATATAACAGAGGACAAAAAAGAATCATTTTGTTGCCGCAAGTGCAAAACGACCTTTTGCCGAAAAGCGTCGCTCAAATCGCACCTCAAGTCATTTCACCGATTAAAACGCATCGACTCCGACATAGAATTTAACTCGGGAGAAAAggagtttgccaaacgtaaacGATGTAAACCCAATCCTAAGATTGACCTAATGGCCGATAATGAACTTAGTGCAAGCGAAAAACCTCAAATTAGAGCCACTAGAAAAAAGGTCATTTTTAAGTGTCACAATTGCGGTGAGTCATTCGAAGGCGAAAAGATATTCGACAAGCATTCAGTATCGTGCAAAAATAACGAGATTAAAAAGCCGAATGCTACTCAAACTGTTGCTACAAATCAAGTGATTTCCACTGAAGATCTGCACTCTTCCAATgctttaaaagattttttgtcGTGCAGTaagtcatttaaaataaaaaacgaacatTCTTCGAATCCTGAACCTTGCACTACGACATGCTGCGGAATCGAGTTTCAAATGGGCAGCCTGCTGCAGTTGCACACGTACAAGACGCACGGAAAGTCTTGCGGAATATGCAACGAGAATTTCTCTTCTTTTAATGCACTTTTTTACCATTTACTAACCCATTCGGTTGAAACGCCGGTCTTACAGTGCGAGGACTGCGAGGTCATGTTTGAAACATGGGAGCAACTCCGGGGTCACCGATGCGTACGATACAAATGCGATTTGTGCGGGGCAACTTGTCGTTCGAAACTCAGATTCGACTCTCATGTGAAAAACCACGAAAAACAAGCTATGTTCAAATGTGACAAGTGTGAGATGACTTTTACTACAAAGTTTTCGTTCAGCAGGCACTACCAGTCGATACATAAGCAAGTTCCCGACGTCGTTCTTGTAACGAAAACGACGAATTCTATCAAATGTGAGGATTGCCAACGTTCCTTCCTATCTATTGATAAAATTCGCAACCACAAATGTATAAACTATACATGCAAGGAATGCGGCGCGACGTTAATGTCGAGatCTGAAGAATATGAATTTTCTGAAGATGCATACATCGATCACTTGACCATCGTGCACCGACGGTGTTTCATATGCAAACAGGCGTTTCAAACTGCCGCCGATTTAAAGAAACATAAGCTAACACATGTTTTGACAGCTCACGGCGAGTGTACTGTTGATGATGGTGTCAACAAAGAAGACAACCATGTACAACTCGAAGTACAAGCAGAAGTATGA
Protein Sequence: MSLKFCRVCATEGTNLTEMGSGVNSCGKKLAACIPEIDLYLVEDPVICKTCSHMVDVAYTLREVCLRNEKRLTVSLENHLSPSKQRTAVSTDDGDDAVVYVSDDECNNVKVTASNPKSVVKDQNSHVVTPNVNCCSSSFYCSICDQSFIGDSLDSHHKEFHLGDTRSADVEAKVAIINKIIARRVNMSNNVPTQRIKPKRKSTLLDNVYAKKTSFECKNCKATFDSAVAFGKHVELRNCLSGEKNGLITNKISGTDDRLHIQLKSKISGIDDGSHVQLKSQISGIVNELHAKSKISGTDNGQHAEIKSKISGIDDGPHLQLKSKISGTINELQGKSKISGTDNGLQVEVKYICDVCGESFVHPSDLEQHSSTHLKNACQLCDKTFASKIELEKHVEFHFTKCCDTKFQTGCAIQLHTYYQHGKSCGICMESFDTFNALFQHLVVHADKKLDFRCIDCNISFNDEEQYSAHRCGKESGEDDTPKSNESDVTSKQPTSTSEDCEILCQSQVELDDQAGTPPQSDKLKNAEPSAPTQTWTCEDCKKVFDTLITITEHQCVSYNCKYCGYLFLSKFVYNIHLLQHSIEKDSPCNLCSSRFTSKVSLILHLKSHYTEICQVCYQAFKTAKVLTRHYITVHCKMLTVALVDYKKHGLSEVSKKYFCRACHTEYCSLHSFHTHVRETHAYCEVCNCTITRIDYMLAHINWHEDCVRPKVPRNCQTAKASNQRVPELRLQISNTAYFCETCQVEFQDKTKYADHVQYMHTKRNTSAGFCQICEIHFKMESKYCDHMKIVHRQCHMCEKSFDNGILLSSHIKTHELSPPKKKCSQCDKKFINKTNLQKHISFCHKIVCHICKKTFKHLNHLKCHFRSHVNNKVKCSFCDKHFKTQSNCDLHVQLMHPRCTIEGDSVNDDDEHVPVEEHVNEQIVDKSCGICKNTFEKPLICKSCSYMVDVAYNLREMCLKNEKRFSVVSNARRKSGDNIIIQKSLEPEYLNDCIEDVNRQLIDLDNDLIVMGNETPQNPIEVKCGGLEKPNITEDKKESFCCRKCKTTFCRKASLKSHLKSFHRLKRIDSDIEFNSGEKEFAKRKRCKPNPKIDLMADNELSASEKPQIRATRKKVIFKCHNCGESFEGEKIFDKHSVSCKNNEIKKPNATQTVATNQVISTEDLHSSNALKDFLSCSKSFKIKNEHSSNPEPCTTTCCGIEFQMGSLLQLHTYKTHGKSCGICNENFSSFNALFYHLLTHSVETPVLQCEDCEVMFETWEQLRGHRCVRYKCDLCGATCRSKLRFDSHVKNHEKQAMFKCDKCEMTFTTKFSFSRHYQSIHKQVPDVVLVTKTTNSIKCEDCQRSFLSIDKIRNHKCINYTCKECGATLMSRSEEYEFSEDAYIDHLTIVHRRCFICKQAFQTAADLKKHKLTHVLTAHGECTVDDGVNKEDNHVQLEVQAEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -