Basic Information

Insect: Geotrupes spiniger
Gene Symbol: Zfpm1
Assembly: GCA_959613385.1
Location: OY390735.1:11555472-11558582[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5 3.5e+02 3.0 0.1 2 23 7 28 6 28 0.92

2 14 0.01 0.71 11.5 1.8 1 23 546 569 546 569 0.95

3 14 0.032 2.3 9.9 0.1 2 23 656 678 655 678 0.93

4 14 0.0008 0.056 14.9 1.4 1 23 686 708 686 708 0.98

5 14 0.00018 0.013 17.0 2.1 2 23 711 732 710 732 0.97

6 14 0.66 47 5.8 1.1 1 10 738 747 738 760 0.82

7 14 0.00049 0.035 15.6 5.3 2 23 767 788 766 789 0.95

8 14 0.00012 0.0087 17.5 2.2 3 23 827 848 826 848 0.97

9 14 0.073 5.1 8.8 0.0 2 23 864 884 863 884 0.96

10 14 0.0002 0.014 16.8 1.2 1 20 890 909 890 912 0.92

11 14 0.00036 0.025 16.0 0.2 1 23 920 942 920 942 0.99

12 14 0.0017 0.12 13.9 3.7 1 23 948 970 948 970 0.98

13 14 4.2e-06 0.0003 22.1 6.7 1 23 976 998 976 998 0.99

14 14 0.00073 0.052 15.0 7.5 1 23 1004 1026 1004 1027 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5	3.5e+02	3.0	0.1	2	23	7	28	6	28	0.92
2	14	0.01	0.71	11.5	1.8	1	23	546	569	546	569	0.95
3	14	0.032	2.3	9.9	0.1	2	23	656	678	655	678	0.93
4	14	0.0008	0.056	14.9	1.4	1	23	686	708	686	708	0.98
5	14	0.00018	0.013	17.0	2.1	2	23	711	732	710	732	0.97
6	14	0.66	47	5.8	1.1	1	10	738	747	738	760	0.82
7	14	0.00049	0.035	15.6	5.3	2	23	767	788	766	789	0.95
8	14	0.00012	0.0087	17.5	2.2	3	23	827	848	826	848	0.97
9	14	0.073	5.1	8.8	0.0	2	23	864	884	863	884	0.96
10	14	0.0002	0.014	16.8	1.2	1	20	890	909	890	912	0.92
11	14	0.00036	0.025	16.0	0.2	1	23	920	942	920	942	0.99
12	14	0.0017	0.12	13.9	3.7	1	23	948	970	948	970	0.98
13	14	4.2e-06	0.0003	22.1	6.7	1	23	976	998	976	998	0.99
14	14	0.00073	0.052	15.0	7.5	1	23	1004	1026	1004	1027	0.96

Sequence Information

Coding Sequence: ATGGATTCTGAAAATATTGTATGTCCCGTCTGCACCTTATTCCTGCGACCTGGCATAACACTGAAGTCGCATTTGACCAGCCACCCGAAGCAAAAGGTTATTGAAGCATTAGTACGTTTATCGAATCCAGACAATTCaccaaaaatagtaaatttgcCATCCGAGCAGAATGACAGTGCGCAATCGGCGAGTAATTCGTCAAGTAACCAAATATGGAACCAAGCTCCAATGCCAGTGAATACTGTTTACCCAAATTTTGGCGCGGTACCAGGTAACCATTCTTTTATATACCAACAGTTCATGAGTTCATCAACTCCTCAACCAAATGTTCTTAATGTAAATCCACTAACGCAGCAGGTCGTGACTATTCCTACAGTGTTTAACTCGCAAATGATGTGTCCACCGTACGTGTACCAGCAACAGCAAGTCATAATGTCGTCGGGTCCATCCATAATGCCCCCACTAATACCAAAACCATTATCAATTGAAATGCCTTCGTCTCCGCAATCCGACGCAGAAGAACAAACTGATCGCAACGCTGTTATAATCGAAGACGAAGAGACCGATATACTTGAACCAGATCAACCGGATTTGGTCAGCGTAGATTTAACGAGTTCCGGAAATATCAGTGTAACATGCAACAGTAAAACTGAAGATTCGGAATTTAACGGTGACAAACTAGAAATTGGCGACGaagacaatataaaaattgacctgAAATCGGATTGCGAAGAGACCGTCATAGTTAAGGgggatgttttaaaaataaaaacgcacaaTATTGACGACGAAGATCCAATTGTTAATGGTTCTAGTAATTCAAATGACGCCATAGCTATCAGCGAGTGTGTACAGCAGGACCACGGTTTAGATTCACCGCACTCGGTTAGTTCAGATTGGACTATAAAGATGAGTAGTGATCTCGATAAGTCGTGTCAAACGCAAGCCATCGTCGAGAATTTAGATCAACTACCTGTGGACGTCGATAATAAACCTGACTGTTATTACACGGACATGCAAGAAGATGTGGTGACTAGCgcaaattatgcaattttacaaaatagtTACAATCAAAACGATTCTGTTTACACCGTTGCTGCTAATCATAATGAAAGTTTGTACGCAAGTCATAATAGTCACGAACAAACCAATTTAATCGACATGGATGGAATGAACTTGTTGATAAGTAACGAATATCTAAATAATCAGTTGGTTTCGCAGGTTGAAGATTTTGAGTGCGTAAGTTCGGAGAGACCCAGGGTTTTAATGAACATCGGCGCAATCGAAACCAATTACACGGACAACAGAGAAGTTGGAGACGAGAGTATGTCGAGAGAAAATGCAAACATTCGAGCGGACGAGCACATGCCTCCTCGTGGTGAACTATCCGGTCAAGAAAGTAACGGCGGAACTAGCGACATGAATTGGAATCGCATCCCATACCAAGAAGGTAGCTGTGGTATGTCGGTGTGTACTTCATACGATCTCATAGCCCGTGAAACTTGGAATGGATCCGACATGTCCGACACTGAAACGCCCCCGGTTCACACGCAAAGTTCCCCTATTGGATACATTTCCAATTACGATAATGACGACACTCCAACTGTGTCGGGGTTCAGGGAACCTCCAATAACCTATAAATGTCCGACGTGTGGTGAATCGTTCAATTGCCCCAAAGAACGAAGAGTGCACCTCCGAGAATATCACGAAACGTCCAAAGAAAAAGAGAAGGAGGTGGAGAGTACCGTTTCGGAACCTGGGAACAAGCGAGTTAAAAAACTTACGATTAAGCCGAAGAAGAGCGACATTAAAACCGAAAATAACTTTGACAACGTGTTCACCAACAAGCTGAAAATTGAAGAGAACGCCGAAGAAAATTTCGACAGGGTGTCTGTTATATTACCACCGAATAATTCGCAATTGGACGTGCAAAAAATGGAAGTCATTATAGTAAATAATCCAATTATGTGCACGACGTGTGATACGATTTTATCAGACAATAACGCCCTGAAGCAACACCGACTGGAGGTACATAAATTTTCAACGGACGTCAAATATAAATGCAAGACTTGCGAACAAACGTTTCCGAACGAGGCAAAGTACACAGAGCACTTGAAGAATCATCCGTTGGAATGCAGATTGTGTGGAAAGTATTTTTATCGAAGACAAAACATGCAATTGCACATGAAGCGTCACCTGGGGATAAAACCGTACAAGTGTAACATTTGCGAGAAGGCGTTTTTAACGAAACAGAAACATGACGAACACAAAAACATTCATACCGGCGAGGCTCCAATCAAGTGCACGTTGTGCGAGGAGACATTTCGACGGCATTCGAATCTGGTTCAGCACAAGAATCGACAtcattttaacttaaaaaagaaacttaaagATTATGTTTGTTTTTGCGGGGATGTTTTCCATTCGATGAAGAAATTGGCCTGGCACAAGGAAATACACGACGTTAAACCAAAGGCATGTTCGCAATGCAGCGAGAAATTTGTGCATATGTCAAGTCTGACTAGGCACATGCGAAGGGCACACAACGAGCGATTCGTGCCGGTCAAGGAACGAGCGACTGAAAACGTCGAATGTCCCATTTGTAAGGGCGTTTATTTGCGTTCCTCGTTGGAGGTTCACATACGTAATCACAGTGGCCAAAGACCATATTCTTGCTTGATTTGCAATAAGGAATTTACCACAAAGTGGAACTTAAAATTGCACAAGTGGACGCACGCTTCACGTACCTCGAAACCTTTTAAATGCGATCAATGCAAAGGTGCGTTTATAAGGGAGTCCGACTACGTGGCACACATGAACTCACACAAGAGCGTCAAGCCCTACACTTGTAACTACTGTGGGGCGCAGTTTATCAGAAAGTACAACTGTCAAAGGCACGTTAAGGAGCATGAAAAGGTTAAAACGTTCAAGTGCCAGGTCTGCGGTAAATGTTTTCACAGGTCTTACTACTTGAAAGATCATATGAGAGTGCATAGCGGTTTGCGTCCATACACGTGTCATATTTGTGGTAAAACTTCAACGACCAAGTCAAATCACAATAAACATGTACGAATACATCATGCTAGAGAACCGGTTAGTACAGAAAACtag
Protein Sequence: MDSENIVCPVCTLFLRPGITLKSHLTSHPKQKVIEALVRLSNPDNSPKIVNLPSEQNDSAQSASNSSSNQIWNQAPMPVNTVYPNFGAVPGNHSFIYQQFMSSSTPQPNVLNVNPLTQQVVTIPTVFNSQMMCPPYVYQQQQVIMSSGPSIMPPLIPKPLSIEMPSSPQSDAEEQTDRNAVIIEDEETDILEPDQPDLVSVDLTSSGNISVTCNSKTEDSEFNGDKLEIGDEDNIKIDLKSDCEETVIVKGDVLKIKTHNIDDEDPIVNGSSNSNDAIAISECVQQDHGLDSPHSVSSDWTIKMSSDLDKSCQTQAIVENLDQLPVDVDNKPDCYYTDMQEDVVTSANYAILQNSYNQNDSVYTVAANHNESLYASHNSHEQTNLIDMDGMNLLISNEYLNNQLVSQVEDFECVSSERPRVLMNIGAIETNYTDNREVGDESMSRENANIRADEHMPPRGELSGQESNGGTSDMNWNRIPYQEGSCGMSVCTSYDLIARETWNGSDMSDTETPPVHTQSSPIGYISNYDNDDTPTVSGFREPPITYKCPTCGESFNCPKERRVHLREYHETSKEKEKEVESTVSEPGNKRVKKLTIKPKKSDIKTENNFDNVFTNKLKIEENAEENFDRVSVILPPNNSQLDVQKMEVIIVNNPIMCTTCDTILSDNNALKQHRLEVHKFSTDVKYKCKTCEQTFPNEAKYTEHLKNHPLECRLCGKYFYRRQNMQLHMKRHLGIKPYKCNICEKAFLTKQKHDEHKNIHTGEAPIKCTLCEETFRRHSNLVQHKNRHHFNLKKKLKDYVCFCGDVFHSMKKLAWHKEIHDVKPKACSQCSEKFVHMSSLTRHMRRAHNERFVPVKERATENVECPICKGVYLRSSLEVHIRNHSGQRPYSCLICNKEFTTKWNLKLHKWTHASRTSKPFKCDQCKGAFIRESDYVAHMNSHKSVKPYTCNYCGAQFIRKYNCQRHVKEHEKVKTFKCQVCGKCFHRSYYLKDHMRVHSGLRPYTCHICGKTSTTKSNHNKHVRIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -