Basic Information

Insect: Geotrupes spiniger
Gene Symbol: Znf652
Assembly: GCA_959613385.1
Location: OY390734.1:2695017-2697344[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00028 0.02 16.4 2.5 1 23 163 185 163 185 0.99

2 14 0.0019 0.13 13.8 2.7 2 23 190 211 189 211 0.96

3 14 1.8e-05 0.0013 20.1 2.0 3 23 215 236 213 236 0.91

4 14 0.0068 0.48 12.0 1.8 1 23 245 268 245 268 0.94

5 14 9.8e-06 0.00069 20.9 1.5 2 23 298 319 297 319 0.97

6 14 0.00045 0.032 15.7 2.5 3 21 323 341 322 344 0.90

7 14 0.0013 0.091 14.3 2.1 1 23 353 375 353 375 0.97

8 14 0.00011 0.0074 17.7 7.2 1 23 381 403 381 403 0.98

9 14 0.00027 0.019 16.4 0.3 1 23 409 431 409 431 0.99

10 14 3.1e-06 0.00022 22.5 1.3 1 23 437 460 437 460 0.96

11 14 0.0017 0.12 13.9 3.2 1 23 466 488 466 488 0.98

12 14 0.00011 0.0079 17.6 0.2 1 23 496 518 496 518 0.97

13 14 2.5e-06 0.00018 22.8 0.9 1 23 524 546 524 546 0.99

14 14 0.0011 0.077 14.5 8.6 1 23 552 574 552 574 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00028	0.02	16.4	2.5	1	23	163	185	163	185	0.99
2	14	0.0019	0.13	13.8	2.7	2	23	190	211	189	211	0.96
3	14	1.8e-05	0.0013	20.1	2.0	3	23	215	236	213	236	0.91
4	14	0.0068	0.48	12.0	1.8	1	23	245	268	245	268	0.94
5	14	9.8e-06	0.00069	20.9	1.5	2	23	298	319	297	319	0.97
6	14	0.00045	0.032	15.7	2.5	3	21	323	341	322	344	0.90
7	14	0.0013	0.091	14.3	2.1	1	23	353	375	353	375	0.97
8	14	0.00011	0.0074	17.7	7.2	1	23	381	403	381	403	0.98
9	14	0.00027	0.019	16.4	0.3	1	23	409	431	409	431	0.99
10	14	3.1e-06	0.00022	22.5	1.3	1	23	437	460	437	460	0.96
11	14	0.0017	0.12	13.9	3.2	1	23	466	488	466	488	0.98
12	14	0.00011	0.0079	17.6	0.2	1	23	496	518	496	518	0.97
13	14	2.5e-06	0.00018	22.8	0.9	1	23	524	546	524	546	0.99
14	14	0.0011	0.077	14.5	8.6	1	23	552	574	552	574	0.98

Sequence Information

Coding Sequence: ATGACCTCGTACTGCCGCTTATGTTTAGAAGCATCGGACAAATTCGAACCAATAGACGACGCGAACGCCGTAACGAACAGGCAGAAAATCGGAATGTTCCTACCCGAAGTGGCAATCGACTCAGTAGATCGTTGCGTTGTATGCTCGAGCTGCACAAGCACGCTCCAACTCATGTACGAGTTCAAATTAAAGTGCATGCGAACGGAAGTCACGATCGAAACGTACGTTAAATCCAACAACGTCGCCGGACCAGTCGACTTGACGACTATCCTCGACTGCTTGAACGGCAAAACGCGCAAAGACATCGAGTTCGTTCAATGCGACGATTACACGAAAACCGCCGCCGAAGAAGAACTGATCGTCCTCGTCGACACCAACACGGAAACCAACGTGGACGAGATCAAGGAAGAATCGTACGATTTGCACTCGGCGGTCGAAATAAAACTGGAAAGTTGCGACGAAAACAAGCCGACAGACGCgtataattataaatgtcacGCATGCAACGAAATCTTCCCCAAGTTTTGGATGCTAAAGAAGCACATGAAGATGCACGCAGCGTGTCTGAAGTGCAACGAGTGCGGCAAGATCTTCAACTCGGAGTTTAACCACCGGAAACATCTGTTATCGCACAAAACCGACTGCTCGATCTGTGGGAAGGTGTTCTCGCGGCGGTGCCACCTTCGAGTCCACCTGGCCGACATCCACGGCTGCATGGACGAAACGGGGCGGCACAGGTGTCCGCAATGCGAAACCGCCTTTTACACGATAACCGCTCTGTGTAAACACGAAATCAGCGTGCACTCTGTTAAAAAGGGGGATAAAGTAGAGTATGATGAAGTGCCAGAAGAGGTTGTCAACGATGTGTGCGATGTTGATAGACTCACGGTGAAGTGTGAAGATTGTAACAAGGTGTTCAATTCACGGTATTACCTCGACAGGCATCGCACGACACACAAGCGAGATTGCGAGATGTGCAGGAAGCAGTTTTCGCGCCACTCGCACCTGCGAGCTCACCTGGGCGACGTGCACGGCTGCACGGATAAAAGTGGGAGGCACAAATGCGAACATTGCGACGCGACTTATTACACAGAGGGTGCACTGTTCAAGCACGTAACGGTGCACGCAATTAAAAAAGgtTACTGTTGCACGGTGTGCAACAAAGAATGCACGACCCAGTACGAGCTGAAAAGACACCTCCGATACCACGCCGATTGCAACAAATACGAGTGCGAGTACTGCCAGGCGAAGTTTGCGCTGAAGAGCGTCCTAGTGACGCACATCAGACGGCACACCGGCGAGAAACCCTACAAGTGCGAGAAGTGCGGCCGGGCGTTTTCGCAGCACGGCTCGCTTTCCACGCACCTCCGCGACATCCACAACGGCGAGAAGCGGTTCTCGTGTCACCTGTGCCAGATGCAGTTCAAGTATCGGGCGACGCTGCTTTTGCACATACAGAAGCACAACGGTACGGTGGAGAAGCCGCACGTCTGCGACGTTTGCGGGAAGGCGTTCAGGCTCGCGTTTGCGTTGCGGGGCCACATACTTCGGCACAAGAACGTGAAAAGTTACACGTGCGTGATTTGCGGGATGGGCTTTGTGGACTCGTGCGGGCTCAAGAGGCACATGAAGACGCACACGGGGGAGAAACCCCACCAGTGCCACCTCTGTTCGTTCAGGTGCAGTCAAAAATCGAACTTGAGGATTCACATTAAGTCGCAtttgaggagaaaagagaagGGATAG
Protein Sequence: MTSYCRLCLEASDKFEPIDDANAVTNRQKIGMFLPEVAIDSVDRCVVCSSCTSTLQLMYEFKLKCMRTEVTIETYVKSNNVAGPVDLTTILDCLNGKTRKDIEFVQCDDYTKTAAEEELIVLVDTNTETNVDEIKEESYDLHSAVEIKLESCDENKPTDAYNYKCHACNEIFPKFWMLKKHMKMHAACLKCNECGKIFNSEFNHRKHLLSHKTDCSICGKVFSRRCHLRVHLADIHGCMDETGRHRCPQCETAFYTITALCKHEISVHSVKKGDKVEYDEVPEEVVNDVCDVDRLTVKCEDCNKVFNSRYYLDRHRTTHKRDCEMCRKQFSRHSHLRAHLGDVHGCTDKSGRHKCEHCDATYYTEGALFKHVTVHAIKKGYCCTVCNKECTTQYELKRHLRYHADCNKYECEYCQAKFALKSVLVTHIRRHTGEKPYKCEKCGRAFSQHGSLSTHLRDIHNGEKRFSCHLCQMQFKYRATLLLHIQKHNGTVEKPHVCDVCGKAFRLAFALRGHILRHKNVKSYTCVICGMGFVDSCGLKRHMKTHTGEKPHQCHLCSFRCSQKSNLRIHIKSHLRRKEKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -