Basic Information

Insect: Geotrupes spiniger
Gene Symbol: -
Assembly: GCA_959613385.1
Location: OY390740.1:770836-778604[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0069 0.49 12.0 2.8 1 23 1530 1552 1530 1552 0.96

2 16 4.8e-05 0.0034 18.8 2.2 1 23 1558 1580 1558 1580 0.98

3 16 0.00066 0.047 15.2 3.2 1 23 1586 1608 1586 1608 0.97

4 16 1.9e-05 0.0014 20.0 4.2 2 23 1615 1636 1614 1636 0.97

5 16 0.0037 0.26 12.8 2.2 1 23 1640 1662 1640 1662 0.98

6 16 2.7e-05 0.0019 19.6 1.9 1 23 1668 1690 1668 1690 0.98

7 16 8.1e-05 0.0057 18.1 3.8 1 23 1696 1718 1696 1718 0.99

8 16 1.1e-05 0.00079 20.8 2.3 1 23 1724 1746 1724 1746 0.97

9 16 0.0023 0.16 13.5 1.5 1 23 1752 1774 1752 1774 0.97

10 16 0.0002 0.014 16.8 8.5 1 23 1780 1802 1780 1802 0.98

11 16 7.3e-06 0.00052 21.4 2.9 1 23 1807 1829 1807 1829 0.99

12 16 0.021 1.5 10.5 4.8 1 23 1835 1857 1835 1857 0.98

13 16 1e-06 7.1e-05 24.1 5.6 1 23 1863 1885 1863 1885 0.99

14 16 1.8e-05 0.0012 20.2 0.8 1 23 1891 1913 1891 1913 0.97

15 16 0.00014 0.0099 17.3 5.1 1 23 1947 1969 1947 1969 0.96

16 16 7e-05 0.005 18.3 6.8 1 23 1975 1997 1975 1997 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0069	0.49	12.0	2.8	1	23	1530	1552	1530	1552	0.96
2	16	4.8e-05	0.0034	18.8	2.2	1	23	1558	1580	1558	1580	0.98
3	16	0.00066	0.047	15.2	3.2	1	23	1586	1608	1586	1608	0.97
4	16	1.9e-05	0.0014	20.0	4.2	2	23	1615	1636	1614	1636	0.97
5	16	0.0037	0.26	12.8	2.2	1	23	1640	1662	1640	1662	0.98
6	16	2.7e-05	0.0019	19.6	1.9	1	23	1668	1690	1668	1690	0.98
7	16	8.1e-05	0.0057	18.1	3.8	1	23	1696	1718	1696	1718	0.99
8	16	1.1e-05	0.00079	20.8	2.3	1	23	1724	1746	1724	1746	0.97
9	16	0.0023	0.16	13.5	1.5	1	23	1752	1774	1752	1774	0.97
10	16	0.0002	0.014	16.8	8.5	1	23	1780	1802	1780	1802	0.98
11	16	7.3e-06	0.00052	21.4	2.9	1	23	1807	1829	1807	1829	0.99
12	16	0.021	1.5	10.5	4.8	1	23	1835	1857	1835	1857	0.98
13	16	1e-06	7.1e-05	24.1	5.6	1	23	1863	1885	1863	1885	0.99
14	16	1.8e-05	0.0012	20.2	0.8	1	23	1891	1913	1891	1913	0.97
15	16	0.00014	0.0099	17.3	5.1	1	23	1947	1969	1947	1969	0.96
16	16	7e-05	0.005	18.3	6.8	1	23	1975	1997	1975	1997	0.98

Sequence Information

Coding Sequence: ATGTTCAAAAAGTTGAAGGACAAGATCGCCGAGGAAGTGAAAATATCGCCGCAACGGATACAGCAGCTGACCCAGTCCGTCACCGATCGCCTGCAGAACACCTCGGTCGACGACAATTTTTTCTCACTGGGCGACGACGATTCGCTCGCCTCGAATTCGACGCTGGACGCCGGCTTCAGCGACGTCAATTTACATGCGTCCACTCCGATGGACCGAACCAGGAGATACTCGAACTCTTCGATGGCCAGCGACGTGTCGTTTTTACCCAGATACGAACCGACGGGGAACTTATATCACATGCagtCGGATCTCGATGCGTCCGCAAGTGAAGTCGAAGACAACGCGTCGATGTCGTCGCAACTCGGCCACGTCAGTAAAGAGCAGGTGTACTCGGCGTTTCAAAAGGCGCAGATGCGTTACCACAAATACCGAGGTCGCTACACCGACCTGGCCAACCATTACAAGATTTTAGAGAAAGAAAACGTGAAAATCAAAGGCGTGCTGGTAGAAACGCAAGACAAAGCGATTAGACGAGTGAACGAGTTGAAAGAGCAGTGTTCCCTCGAGCAGAAAGCGAAAGCCCATCTCGAAAATGCCCTGCGGGTAGAACTAGacgaaaagcaaataaaaatcgaCACGTTGCAgacgaaaattcaatttttacgCAACGGCACCGCCAATGACCTAAGTTTAGAAAACAACGATAAAACCGTCACGGACAACGTCGAGGCTTTAACGAAGGAACTAAACGATGCAAAAGCTGAATCGGAAACTTTCTTCGCCAAAATCCAAGAGCTCAAAGCCAATTCGATTATTTTCAACACGAAAGAAGCCGAGTACAAGCAGAAGATCAGCGAGCTGGAAAAAACCCTGCAGGACAAAAACGACACGATATCCAAGTTCGCCGAGTGCGAAAAAGAGAACAATCTGAAGCTGGCGCAGAACAAAATGGAACTGCATACGGAAATACAAAACAAGGACCTGGAAATAGCGAACATGAAGCGCGACGTCGAAGCCTTAAAACACGACTTGGAGAAGTACGAAAAGTCGAAGAGCAACGGGACCAACGTCAAGTTGGAAAACTTGCAGTCGCAAAACTCGAATTTGATCGAAAAGATCGACGCGCTGAACCAGAAGTGCAAGAGCTACGAAAGCGAGCTGATCAAGTTGGAGCAGTACAGGGTCGAAATGGCGAACATGAACCAAATCATCGCGAACTTGAGAAAATCAAACGAAGACGTCAAAGTCACCAATGATTTTAACATCGAAAAACTCGATAAATTAACGAGGGAACATGAAGAATTGCTTCGCAGGACTGACGACGTGCAAATCGAACTCGAAAAGGCGAAGGAAGAAAACGCCGATCTACGAAAAAGGTCGTCAGAGGCGGAAGAGTTTAAACTTCGATTGGACGAACTTCAATCGAAATACGAAGACGTTTTGGTCGAAATGGATGAAGTCGTCGTGGAAAGGTCGAATTTGCGAAGCAAAATTGCGCTTATGCAGGAAGAATTGGATTTTCGATGCAAAGATCTTCGGGAAATCTCGTTGGAGTTGCAAGCGAATAAAAACGACTACGAAGAAAATTTGACGAGAATGAGAGACGACGCTAAGACCAGCCTGTTGACGttagaaaccaaaataaaagataaattgtCGGCCGAGTTCAACGAAAAAGAAGAACGAGCGAAAGAAGACTTCAGGACGAAACTGCAGCGGCTGTCGTCGAACGAAAACGACGTCAAAGCCACCGAAATTAAACTCATGCGCAGCGAAGACAAAATCAAATCGTTGCAGACGTTGACTCGCGATTTGCAGACCGAACTGGacgatcgaaaaaaaaaatacgtcgaGTTGGAAAACAACCATTTGGAGTTGATCAACGAGAGCGCCGTCGTAAGACAACAGTTGGCGACGCTCGAAAAACAAAACCAAGAACGCGACGACGCGCTATCAACTTTGCGAAAAGAAAACGCGCGGATGAAACAGCTCACCGTCGAATTCAAAGACGAAATCGAAAGACTGAACGAAGAAGTCGCGAAGCTGGAGGCGGAAAATTCGTCGCTGTTGAATTCTTCGAGCGAAAACGAAACCTTCGAGAGAAACGTGGCCGATTTGATCGAAGAAGTTTCGTGCCTCAAAGAAGAAATCGCGGCGAAGACCGCCGAGTTCGATTCCGTCGAGAAAGAATTCGCGTCGATGCAGGAAAAATTAAACGCGGAGATCTTGGAGAAAGCCGAGCATTGCGACGTCATTCGAGACGAGATTTCGCTGCTGCAAGAAGTCTCGAGCAAGCAGCAGAACGAAAATTGCGCGTTGATGGCGACGAACAAAAATTTAGAGGACGCGCTGTCGagtttaaaacaagaaaatgagaaattacgcgaagaaattttaaattctaaagaGTTGTCGTTGCAGAGAGACATCTTAGAAAAAGACGTGTTGAGGCTTCGCGAAGAGACTGAAAGACAGGATACGATCAATGAAACAACTAAGatagaatttgaaaaattgtcaaagaaatATACAGAGTTGAACGACGAGGttatacaaaaagaaaaaataaatgcgaCGCTATCCAAGAACGTCGACGAACTGTCGCGTGAATTATCGCAAATTTCCGAGGTTAACCGAAAATTAATGAACGATTGCGAACGCTTAAACGAAAAATTTGCTTCCGTCGAAGATAAATTAGCCGAGTCGTCGAAAACGATCGAAGAAAAAAACAACCGGGTGATcgacttacaaaaaaaaatctcggGAATGGAAGAACTGTCACAGAACGAAAGTTTAAAGAACGCCGCTGATTTAGATTCGCTCAGACGAGAGTTGGACGTCCGAAACGGCGAAAGAACCTCccttgaagaaaaacaaatcgatttgaTTAAACAATTGGACGAGTGCGAAGTAAAATATCGAAACAAATCGGAAGAAAATCGCCAACTAAAAGACCAACTGTCGGAAATCGAAACGTTACGAACGCAACTGCAATTGACGCAGAACGAGTGCATGCGAGCGCGGTCGGAGAAAAACGACGTCGACGCGCAAAGAACCGAAGAAAACAAACGACTCAAATCCGAACTGACGCAATTACGTATTTCGATCGAAAATTTCGAAACGACCCGACTCGAAAACGCCAAAATGGTCGAGGACATTTCGCATCTGCGATCGCAGGTGACCGAAAATCTCGAAGAAAATCAAACTTTAAAGCAAAACTTGTCGAAATTGAAACATCTCGAGTCAAAATACGACGAAATATCGGCCGAGAAAGAACAAGCAATGATCGAACACAAAAAAATCGCGCACGAGATGGACGAATTGCATCGACGCAACCGACAACTGTCGTCGGATTACGAGCACATTTTAAACGAACACGAACGGGACCTGTGCGAATTATCCGAGCGCAAGCTTCAATACGAAAGCGTCCGACGAGACATCGATAAACTCGAGGAATACGCCAGAGAAAACGATTTGTTGAAAAGTAAATGCGAAGACGTCGAAGATAAACTGCGACGGACGCAGCGGGAGAAGAACGACTTGGAACGGTTGCGAAACTCGACGGCGGAAACGAACGAGAACGAATCGTCGTCGTTGAGAAGTCGGATCAACGACCTGGAAGACGTGAAGTCGAGATACGACGCGTTGTCTTTCGAAAACAAAGAGCTGAAAGCACAACTTGATAACTTGAAGCAAACGTGCGATAAGATcgacgaagaaaataataataaggcgGCGCAATTGGAAGAATTAGAACGGCATTACAACGAGGTGGTTCACGAAAAGCAATTCTTGCACGACGAGATACAAGAATTGAAGATTTCGCCGCTGAACTACGATAAGTTGGATGACGACGTTAACACGGCCGATAGGACCAACGTGAAAGAGATCGAGAGTTTACGCGAAATGTTGGAGCAGTACAAATCGATAGATAAAGCGAACAGGTCGTCGATAGAGTTCTACGAAGACGAGCTGCAGAAATTGAAAGTTAAAAACGAGAAGCTCGGGCGGAAGTTGGACGAGACTTTGGTCACGTTGCCCATGCTGGCCGTTTCGAACGACTTGGGCGATTCGACGGCAGTTCTGGAATACTTGAGGAACGTGCTGTTCAACTACATGACCGGGAAAGAAAGCCTCGTGTTGGCTAAAGTAATAGCGGCGGTGTGTAAATTCGATAAGCACCAAACCGAGCTGATATTGCAGAAAGAACAACAGCGGCAGACTGTGgtaGATAACATGGAGATTGACATAAATGACGAATGCACGACGGTCACAGTAAAATCGGAATCGACACGAGTAATATCTAAATCAACACAAGATCCCGCTTCGTTCCCAAATCTGCAGTCACCTCACGTTGAAATTGATCCAGACAAATCAGAATGCGGGGCTACTATAAAACAAGACGAACACGATGTTTCCGCGACGACATTCGAAACTGTCGACGTGGCACGAAACGTTTCAAACGGAATCGAACCGATCGACGTCGACTTAACTTTCAACGCGAAAGAGCCAAGTGAAAGTGATTTTAAACGCAAACATTCGAAAACGAGAAAAGTCACATCGAAACGAATATTACCGAGAAATGATcacaaatgcgaagtttgcgACAAACGTTTCACGACCGAACCGAGCAAATCGCGACACACGAAAGCGCACTCCGGCGAACGAAACCACGAATGCGAAGTTTGCGCGAAGCGCTTCACGAGGAACATGAACTTGCTGCGGCACGTGAAAACGCACGCGGGACAAAAAGACCACAAATGCGAAACTTGCGGCAAACGTTTCACGTCGAAGCAAAGCATGTTGCTGCATTTGCAGTTGCACACCGATGCTGCCAATTGGAAATGCGAAATTTGTAACAAGTGCTTCACGACGAGGCAGTATCTATCGCGGCACGTTAAGACCCACACGAGCGTTCacgaatgcgaaatttgcgaaaAACGTTTCACGACGGGGGCGAGCAAGTCGCGTCACTTGAAGACGCACAGCGCCGACAGGAATTTCGAGTGCGCGTTTTGCGGCAGATGTTTCACGACGAACGAGAATTTGTTGGAACATTTGAAATTGCACGGAAACGATAGGagttataaatgtgaaatttgccgACAGTGTTTTACTAGAAACCAAAGCATGTTGCGGCACATGGCgacgcacaccggcgagagaAATTTCAAATGCGACTTTTGCGATAAATCCTTCACGACGAACCAAAGTTTGATGCGACACGCGAAACTGCACCCGGACGAACGGAGctataaatgcgaaatttgcaacaaacggTTTATAACAAATCGAAGTAAGCTGGAACATGCGAAGTCGCACGTCGACGAAAAGAaccacaaatgcaaaatttgcagTAAACGCTTCACAACGCAGCATCATTTGTCACGACACGTCGCGACGCACGTCATCGGTCGatataaatgcgaaatttgcgacagATCCTTCACGAGAAACCAGAGCAAGTTGCGCCACATGAAGACGCACGCCAGacaaagaaactacaaatgcgacCGTTGCAACAGGTGCTTAACGACGAGCGAAAGCATGCGGCAGCACACGAAATTGCACACCGGCGAGAGGAACTacgaatgtgaaatttgcggcaAATGTTTTACGACGAGACGTCACCTGACGCGACACGCGAAAACGCACGTCGTCGATAAAATTTAcgagtgcgaaatttgcgacaagCGCTTCACGAGGAAGCAAAGTATGTTGCGGCACGTCAACGCGCACGGcggcgaaaaaaattataaatgcgaaatttgctgTAAGTGCTTCGCGACGAAGGAATGCAAATTGCGGCACACGACGGTGCACACCGGCGAGAGAAACCacgaatgcgaaatttgcggcaAGCGCTTCACGACGAAACAACATCTGGCGCATCACTTCGAGATACACGCCGGTCGCAGGAATCATAAATGCGAAGTTTGCGATAAGTGCTTCGCAACTCGGCATTATCTGGCGCGACACGTCAAGACGCACGAACAAAAAAACTACGATCGTGGAAATGAACTTGCGAAAAAAACTGCCGTTGAAAAACGCAATGAGGAAGACTATCGTGGAATTAGACGAACGCAAATTTGCAAAGTTGCTGAGCTGTTAATTAAAGAAGAGATCGATACGTTCGTGAAGACGGACGATTCGGAGACCGTCGATGATACTACAGAAAGAAAACTGACAATGGCCGCAAATGAAAGTCGTATTGACGTTAAGGAAGGCGAAGCCACAATAAAGGAAACTTTAAATTCTTCACAAATTCTCCACCATGAGATTATAATCAAGGAAGAAGATACAACAGAAACCTAA
Protein Sequence: MFKKLKDKIAEEVKISPQRIQQLTQSVTDRLQNTSVDDNFFSLGDDDSLASNSTLDAGFSDVNLHASTPMDRTRRYSNSSMASDVSFLPRYEPTGNLYHMQSDLDASASEVEDNASMSSQLGHVSKEQVYSAFQKAQMRYHKYRGRYTDLANHYKILEKENVKIKGVLVETQDKAIRRVNELKEQCSLEQKAKAHLENALRVELDEKQIKIDTLQTKIQFLRNGTANDLSLENNDKTVTDNVEALTKELNDAKAESETFFAKIQELKANSIIFNTKEAEYKQKISELEKTLQDKNDTISKFAECEKENNLKLAQNKMELHTEIQNKDLEIANMKRDVEALKHDLEKYEKSKSNGTNVKLENLQSQNSNLIEKIDALNQKCKSYESELIKLEQYRVEMANMNQIIANLRKSNEDVKVTNDFNIEKLDKLTREHEELLRRTDDVQIELEKAKEENADLRKRSSEAEEFKLRLDELQSKYEDVLVEMDEVVVERSNLRSKIALMQEELDFRCKDLREISLELQANKNDYEENLTRMRDDAKTSLLTLETKIKDKLSAEFNEKEERAKEDFRTKLQRLSSNENDVKATEIKLMRSEDKIKSLQTLTRDLQTELDDRKKKYVELENNHLELINESAVVRQQLATLEKQNQERDDALSTLRKENARMKQLTVEFKDEIERLNEEVAKLEAENSSLLNSSSENETFERNVADLIEEVSCLKEEIAAKTAEFDSVEKEFASMQEKLNAEILEKAEHCDVIRDEISLLQEVSSKQQNENCALMATNKNLEDALSSLKQENEKLREEILNSKELSLQRDILEKDVLRLREETERQDTINETTKIEFEKLSKKYTELNDEVIQKEKINATLSKNVDELSRELSQISEVNRKLMNDCERLNEKFASVEDKLAESSKTIEEKNNRVIDLQKKISGMEELSQNESLKNAADLDSLRRELDVRNGERTSLEEKQIDLIKQLDECEVKYRNKSEENRQLKDQLSEIETLRTQLQLTQNECMRARSEKNDVDAQRTEENKRLKSELTQLRISIENFETTRLENAKMVEDISHLRSQVTENLEENQTLKQNLSKLKHLESKYDEISAEKEQAMIEHKKIAHEMDELHRRNRQLSSDYEHILNEHERDLCELSERKLQYESVRRDIDKLEEYARENDLLKSKCEDVEDKLRRTQREKNDLERLRNSTAETNENESSSLRSRINDLEDVKSRYDALSFENKELKAQLDNLKQTCDKIDEENNNKAAQLEELERHYNEVVHEKQFLHDEIQELKISPLNYDKLDDDVNTADRTNVKEIESLREMLEQYKSIDKANRSSIEFYEDELQKLKVKNEKLGRKLDETLVTLPMLAVSNDLGDSTAVLEYLRNVLFNYMTGKESLVLAKVIAAVCKFDKHQTELILQKEQQRQTVVDNMEIDINDECTTVTVKSESTRVISKSTQDPASFPNLQSPHVEIDPDKSECGATIKQDEHDVSATTFETVDVARNVSNGIEPIDVDLTFNAKEPSESDFKRKHSKTRKVTSKRILPRNDHKCEVCDKRFTTEPSKSRHTKAHSGERNHECEVCAKRFTRNMNLLRHVKTHAGQKDHKCETCGKRFTSKQSMLLHLQLHTDAANWKCEICNKCFTTRQYLSRHVKTHTSVHECEICEKRFTTGASKSRHLKTHSADRNFECAFCGRCFTTNENLLEHLKLHGNDRSYKCEICRQCFTRNQSMLRHMATHTGERNFKCDFCDKSFTTNQSLMRHAKLHPDERSYKCEICNKRFITNRSKLEHAKSHVDEKNHKCKICSKRFTTQHHLSRHVATHVIGRYKCEICDRSFTRNQSKLRHMKTHARQRNYKCDRCNRCLTTSESMRQHTKLHTGERNYECEICGKCFTTRRHLTRHAKTHVVDKIYECEICDKRFTRKQSMLRHVNAHGGEKNYKCEICCKCFATKECKLRHTTVHTGERNHECEICGKRFTTKQHLAHHFEIHAGRRNHKCEVCDKCFATRHYLARHVKTHEQKNYDRGNELAKKTAVEKRNEEDYRGIRRTQICKVAELLIKEEIDTFVKTDDSETVDDTTERKLTMAANESRIDVKEGEATIKETLNSSQILHHEIIIKEEDTTET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -