Basic Information

Insect: Geotrupes spiniger
Gene Symbol: -
Assembly: GCA_959613385.1
Location: OY390739.1:15649812-15664056[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 3.9e-07 2.7e-05 25.4 2.7 2 23 47 68 46 68 0.98

2 27 0.00093 0.066 14.7 4.1 1 23 74 96 74 96 0.98

3 27 6.5e-06 0.00046 21.5 0.9 1 23 102 124 102 124 0.98

4 27 0.47 33 6.2 0.3 2 23 131 153 130 153 0.91

5 27 0.00014 0.0097 17.3 0.1 1 20 158 177 158 180 0.95

6 27 0.003 0.21 13.1 2.2 1 23 190 213 190 213 0.96

7 27 9.1e-05 0.0064 17.9 0.1 1 23 221 243 221 243 0.97

8 27 5.1e-07 3.6e-05 25.0 2.9 2 23 250 271 249 271 0.98

9 27 2.4e-06 0.00017 22.9 3.9 1 23 277 299 277 299 0.99

10 27 0.0039 0.27 12.8 0.2 1 21 305 325 305 326 0.96

11 27 0.00011 0.0076 17.7 0.0 1 22 390 411 390 411 0.96

12 27 6.1e-06 0.00043 21.6 0.6 2 23 421 442 420 442 0.96

13 27 0.00038 0.027 15.9 0.2 1 23 448 471 448 471 0.93

14 27 0.4 28 6.4 0.2 1 23 482 505 482 505 0.94

15 27 0.00026 0.019 16.5 0.1 1 23 511 533 511 533 0.96

16 27 7.7e-05 0.0054 18.1 2.1 1 23 539 561 539 561 0.95

17 27 0.00055 0.039 15.4 2.5 1 23 567 589 567 589 0.98

18 27 0.77 55 5.5 6.6 1 23 595 617 595 617 0.98

19 27 0.0084 0.59 11.7 0.1 2 23 724 745 723 745 0.94

20 27 0.0082 0.58 11.8 5.1 1 23 751 773 751 773 0.98

21 27 0.0099 0.7 11.5 1.9 1 23 779 801 779 801 0.89

22 27 0.00039 0.027 15.9 3.4 1 23 807 830 807 830 0.98

23 27 0.00058 0.041 15.4 3.4 1 23 842 865 842 865 0.95

24 27 0.017 1.2 10.8 0.8 3 23 876 896 875 896 0.98

25 27 2.6e-06 0.00019 22.7 1.3 1 23 902 924 902 924 0.96

26 27 8.9e-07 6.3e-05 24.2 0.7 1 23 930 952 930 952 0.98

27 27 0.12 8.8 8.0 0.2 1 21 958 978 958 979 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	3.9e-07	2.7e-05	25.4	2.7	2	23	47	68	46	68	0.98
2	27	0.00093	0.066	14.7	4.1	1	23	74	96	74	96	0.98
3	27	6.5e-06	0.00046	21.5	0.9	1	23	102	124	102	124	0.98
4	27	0.47	33	6.2	0.3	2	23	131	153	130	153	0.91
5	27	0.00014	0.0097	17.3	0.1	1	20	158	177	158	180	0.95
6	27	0.003	0.21	13.1	2.2	1	23	190	213	190	213	0.96
7	27	9.1e-05	0.0064	17.9	0.1	1	23	221	243	221	243	0.97
8	27	5.1e-07	3.6e-05	25.0	2.9	2	23	250	271	249	271	0.98
9	27	2.4e-06	0.00017	22.9	3.9	1	23	277	299	277	299	0.99
10	27	0.0039	0.27	12.8	0.2	1	21	305	325	305	326	0.96
11	27	0.00011	0.0076	17.7	0.0	1	22	390	411	390	411	0.96
12	27	6.1e-06	0.00043	21.6	0.6	2	23	421	442	420	442	0.96
13	27	0.00038	0.027	15.9	0.2	1	23	448	471	448	471	0.93
14	27	0.4	28	6.4	0.2	1	23	482	505	482	505	0.94
15	27	0.00026	0.019	16.5	0.1	1	23	511	533	511	533	0.96
16	27	7.7e-05	0.0054	18.1	2.1	1	23	539	561	539	561	0.95
17	27	0.00055	0.039	15.4	2.5	1	23	567	589	567	589	0.98
18	27	0.77	55	5.5	6.6	1	23	595	617	595	617	0.98
19	27	0.0084	0.59	11.7	0.1	2	23	724	745	723	745	0.94
20	27	0.0082	0.58	11.8	5.1	1	23	751	773	751	773	0.98
21	27	0.0099	0.7	11.5	1.9	1	23	779	801	779	801	0.89
22	27	0.00039	0.027	15.9	3.4	1	23	807	830	807	830	0.98
23	27	0.00058	0.041	15.4	3.4	1	23	842	865	842	865	0.95
24	27	0.017	1.2	10.8	0.8	3	23	876	896	875	896	0.98
25	27	2.6e-06	0.00019	22.7	1.3	1	23	902	924	902	924	0.96
26	27	8.9e-07	6.3e-05	24.2	0.7	1	23	930	952	930	952	0.98
27	27	0.12	8.8	8.0	0.2	1	21	958	978	958	979	0.94

Sequence Information

Coding Sequence: ATGTTTCCGTACACCATAGCCGCATTGGAATGGATCACGAGCTATCTGCGCAAGGCAAACGAAAAGGAACGCGGTTACCAGAAGGTTTTCCTTTCGTATGAATCTTTTTTTCCTATGGGgAAAATCCCATCAGTGGGAAAATGCCACGTATGTTCGAAAGTATTTACCAGGCGAGGTCAGTTAAAAAGACACATGATTACTCACTGCGACGCGAGGCCTTACGAATGCAACGTCTGCCGTAAACGTTTCAAACGTAAATTTGAAATGCTGACACATACCAAATACCACAATGAGGTCAAGCCGTTCGTTTGCGAGGTGTGCGACAAGCAATTTAAACGAAAAGGTGCCCTGGACACCCACCAGAAGAGGCACATTAAGGACTACAAGGTAGTGTGCGACATTTGCGAAGCCGGTTTTTACTCGAACTGCGAATACAAGCTACACGTCGGGTCCAAGCACGGAAAGAGCGATTTCGTTTGCCCCGTCTGCGAAAAAACGTTTTATAATCGGGGAGGTTTGAACATGCACATGCCACTGCACGAGGAGGGCTACAAAGAGAGCAAGAAGCATAAATGCAACGTGTGCGGAAAAGGATTTTTGCAGCAGGGGTACTTGAAAGATCACTTCAATAAAATGCACACGGACGCCGCTAGGAAACTGTACGTGTGCGATTTGTGCGGGAAGAAGGTGTCGTCTGCGGCGAGTCTGAAAGAGCACCAGCTGCTGCACGAAGGTCTGAAGCCGAATAAATGCGACGCGTGCGGAAAATGTTTCAGCTCCAGATCGAATTTGTCGGTTCACATGCGCACGCACACTGGGGTCAGACCGTATCAGTGCGAACACTGCGATAAGTCTTTTACTCAAAGGAACACTTTTGTGATACACATGAGGAACCACACTGGCGAACGTCCGTACGAGTGCCGGTTATGCGATGAGAACTTCATCAGTAGAAATTCTTTAAACTTGCATCTTAAGGataaGAGACCAGGTCTgcgaatttccaaaattaattcacaaaatGCGAAGCAAGCTAAATTAGCAAATGATGGGACGAGCTTTGAAGAGGTGACTGTTGATGAAGATTACGTACCTCCGAAATCATCGAAGAACAAAAAGACGGAGGGTGCAAAAAAGAACAACAACTTCGTCAAAGTGCGCAGTACGAACTACATATGCGTGATGTGCGGCCAAAGCTTCCCCGATTTCGATTTGCTGAACGCCCACATGAGAAGCGTCGAGCCTTGCCGCGTGATAGTCGTCACGTGTCCCATATGCGATAAGATCTTCAAGAACAAAAGCCGACTGTCAACTCATATGTTTGTGCATAAAGAAAAGGAGAAGCACCCTTGCGACAAATGCGGGAAAATTTTCTCCAACCCAGTATCGCAACAGGCGCATTTGGAATTAATGCACACGAATTACTTCGACGCCACTGTCGACGGCTTCCTTTGCAAGCTGTGCGACGAAAGTGCGCCGACCAAGCCCGCGATTTTGCACCACATCAACGTCAAGCACATGCACGTGACGACGTTCCTGTGCGACGTTTGTGGGAAAAGTTTTCTGAACGAGAACGGACTGAAAGCCCACATCATGACGCACAACGACACCAAACCGTTTCTGTGCCAGCTTTGCTCGAAATCTTTCAAAATGTCGACGTCTCTCAAAGCTCACTTAAAAACGCACTCCCAAGAAAGAAGGTTCGTTTGCGAGGAATGCGGGAAACTGTTCAAGAAAAAATGCAGCCTCGTTGAGCATAAGAAAATACACGCGGGTGATTTTCAGTTTCATTGCAATATTTGTATGAAGCAGTTTGTTAGTAAGTCGACGCACAATTCGCACATGAAGTCGCATTTCGTTGATAATCTGATattaatcGCAACtgataatttattaaagaaGTTAATATTCGGACCGTCGATGTCGATAACGTTACAGAACAAGTCGTTACACTCCGACATAAAGATCGAACCCGATGATACCGAATATAACATATCCGCAAGTTTAACGAATAATTACGAACGGAAGGACGGCGACGAGTCCGAAGACGACGAAACTTTATGGTCGAGGTTGAAACGCCAAAGGACCAAGAAAACACAAGCGGTGCCACAAAACATCCCCAACATAATCAAACTAGATCTGCGCAAGTTCGAACCGCGAAACGAGGCGATAcagtgcgaaatttgcgacaagACCTTCCAGAACAACTTGGAGTTCGGCCTGCACACGATCGTGCACAACAACAATTTAAAGTACAACTGCCACATGTGCAAATATTCGAGCGCGTCGAAGTACCATTTTGAGATGCACGTGCGCGTCCACGAAGGCAACACCAagtacaaatgtgaaatttgcaataaggCATTCACAGTGAGCACGCACGCCGTCGAgcataaatatttccattcgGGAGAGAAACCGTTTCAGTGCGAGATATGCGGGAAACATTTCATGTTTTCGTGGTTCTTGACGTCGCATCGGCGATCTCAGCATTGGGAAATTATGACCGGGAAGCCGTTGGTTAAATACGACTGTCAGATTTGCAATAAACACTATACGTCTTCAACGGGGCTGAAGCGCCATAAAATTAGTAAACACAACGACGGCGGTGCAGAAAGCGCCGTATTGTGCGACATATGTGGAAAAAGATTGGCCagcaaagaaaaattgaaattccatCGTCGAATCCACACTGGTTATAAGCCACACGCGTGTAGCGTTTGTCCGAAATCGTTTACTCGAAAGGAGCAACTGAAGGAACACGAACGGGTCCACACAGGCGAAAAACCATACATTTGCAAGTACTGCGGTAAGGGTTTTACTCAAAGAAGTCCTTTGAGAATTCATGAACGAACGCACACTGGCGAGAGGCCGTACGTTTGCAGGCTCTGCACCAAAGGATTCATTTCGAAGGGAGTAATGGACACTCATATGAAAAACTGCCAAGGACCGCCTATCGTTTAA
Protein Sequence: MFPYTIAALEWITSYLRKANEKERGYQKVFLSYESFFPMGKIPSVGKCHVCSKVFTRRGQLKRHMITHCDARPYECNVCRKRFKRKFEMLTHTKYHNEVKPFVCEVCDKQFKRKGALDTHQKRHIKDYKVVCDICEAGFYSNCEYKLHVGSKHGKSDFVCPVCEKTFYNRGGLNMHMPLHEEGYKESKKHKCNVCGKGFLQQGYLKDHFNKMHTDAARKLYVCDLCGKKVSSAASLKEHQLLHEGLKPNKCDACGKCFSSRSNLSVHMRTHTGVRPYQCEHCDKSFTQRNTFVIHMRNHTGERPYECRLCDENFISRNSLNLHLKDKRPGLRISKINSQNAKQAKLANDGTSFEEVTVDEDYVPPKSSKNKKTEGAKKNNNFVKVRSTNYICVMCGQSFPDFDLLNAHMRSVEPCRVIVVTCPICDKIFKNKSRLSTHMFVHKEKEKHPCDKCGKIFSNPVSQQAHLELMHTNYFDATVDGFLCKLCDESAPTKPAILHHINVKHMHVTTFLCDVCGKSFLNENGLKAHIMTHNDTKPFLCQLCSKSFKMSTSLKAHLKTHSQERRFVCEECGKLFKKKCSLVEHKKIHAGDFQFHCNICMKQFVSKSTHNSHMKSHFVDNLILIATDNLLKKLIFGPSMSITLQNKSLHSDIKIEPDDTEYNISASLTNNYERKDGDESEDDETLWSRLKRQRTKKTQAVPQNIPNIIKLDLRKFEPRNEAIQCEICDKTFQNNLEFGLHTIVHNNNLKYNCHMCKYSSASKYHFEMHVRVHEGNTKYKCEICNKAFTVSTHAVEHKYFHSGEKPFQCEICGKHFMFSWFLTSHRRSQHWEIMTGKPLVKYDCQICNKHYTSSTGLKRHKISKHNDGGAESAVLCDICGKRLASKEKLKFHRRIHTGYKPHACSVCPKSFTRKEQLKEHERVHTGEKPYICKYCGKGFTQRSPLRIHERTHTGERPYVCRLCTKGFISKGVMDTHMKNCQGPPIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -