Gspi031066.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Geotrupes spiniger
Gene Symbol
-
Assembly
GCA_959613385.1
Location
OY390740.1:496821-506542[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 42 1.5e-05 0.0011 20.4 1.6 1 23 118 140 118 140 0.98
2 42 0.0005 0.035 15.6 0.6 1 23 146 168 146 168 0.98
3 42 0.0015 0.11 14.1 3.1 1 23 174 196 174 196 0.95
4 42 0.001 0.071 14.6 5.8 1 23 204 226 204 226 0.97
5 42 0.00034 0.024 16.1 1.0 1 23 232 254 232 254 0.95
6 42 5.5e-07 3.9e-05 24.9 2.0 1 23 260 282 260 282 0.99
7 42 0.00059 0.042 15.3 4.6 1 23 288 310 288 310 0.98
8 42 5.3e-05 0.0038 18.6 0.9 1 23 316 338 316 338 0.99
9 42 0.00079 0.055 15.0 1.9 1 23 344 366 344 366 0.99
10 42 2.1e-05 0.0015 19.9 1.4 1 23 372 394 372 394 0.97
11 42 1.5e-05 0.001 20.4 2.7 1 23 400 422 400 422 0.98
12 42 0.00019 0.014 16.9 1.3 1 23 428 450 428 450 0.98
13 42 4.7e-05 0.0033 18.8 0.9 1 23 456 478 456 478 0.96
14 42 1.8e-05 0.0013 20.1 2.6 1 23 486 508 486 508 0.99
15 42 0.00035 0.025 16.1 1.3 1 23 514 536 514 536 0.97
16 42 3.4e-06 0.00024 22.4 1.4 1 23 542 564 542 564 0.98
17 42 0.00041 0.029 15.8 0.7 1 23 570 592 570 592 0.99
18 42 9.2e-06 0.00065 21.0 1.1 1 23 598 620 598 620 0.99
19 42 0.019 1.3 10.6 4.4 1 23 626 648 626 648 0.97
20 42 0.0006 0.043 15.3 1.5 2 23 654 675 654 675 0.97
21 42 4e-06 0.00028 22.2 4.4 2 23 826 847 826 847 0.97
22 42 0.00041 0.029 15.8 1.8 1 23 853 875 853 875 0.96
23 42 0.0016 0.11 14.0 0.9 1 23 881 903 881 903 0.97
24 42 2.3e-05 0.0016 19.8 2.5 1 23 909 931 909 931 0.99
25 42 0.0058 0.41 12.2 5.2 1 23 939 961 939 961 0.97
26 42 5.6e-05 0.0039 18.6 1.6 1 23 967 989 967 989 0.99
27 42 3.3e-06 0.00023 22.4 3.3 1 23 995 1017 995 1017 0.99
28 42 0.00018 0.013 17.0 2.7 1 23 1023 1045 1023 1045 0.98
29 42 1.1e-05 0.00077 20.8 1.5 1 23 1051 1073 1051 1073 0.99
30 42 0.00054 0.038 15.5 1.1 1 23 1079 1101 1079 1101 0.98
31 42 0.0014 0.098 14.2 3.3 1 23 1107 1129 1107 1129 0.98
32 42 0.00026 0.019 16.4 2.6 1 23 1141 1163 1141 1163 0.98
33 42 5.2e-06 0.00037 21.8 1.8 1 23 1169 1191 1169 1191 0.97
34 42 0.0004 0.028 15.9 0.9 1 23 1195 1217 1195 1217 0.98
35 42 0.003 0.21 13.1 1.6 1 23 1223 1245 1223 1245 0.97
36 42 0.0032 0.23 13.0 2.6 1 23 1251 1273 1251 1273 0.97
37 42 1.1e-06 7.6e-05 24.0 2.0 1 23 1279 1301 1279 1301 0.98
38 42 0.00024 0.017 16.6 0.8 1 23 1307 1329 1307 1329 0.97
39 42 0.005 0.36 12.4 0.0 1 23 1335 1357 1335 1357 0.98
40 42 0.0001 0.0073 17.7 0.4 1 23 1363 1385 1363 1385 0.97
41 42 7e-06 0.00049 21.4 2.6 1 23 1549 1571 1549 1571 0.98
42 42 0.00017 0.012 17.0 1.4 1 23 1577 1599 1577 1599 0.99

Sequence Information

Coding Sequence
ATGGCGACCCACATTTACGATTTCAACGTCACAGCCAGCGAAGTAAAACCTGAACCGACAAAATTTGCAACTTTAACTCCAAAACCACAGCTTCACCATGAACCTCGCAAAACAATAGAAACTGCTGTCGTAAAGAAAGAAGAATGTGTTTCCGATCTGCTGACAGAAATAAAAGTCGATGCCGTTGGTGTGACGAAAGATGTCTCAAATATTGGAAGTGGATGTAGtgacataaaaattaagttgGATCTCGGCGATGATAATTTGTCAAATTCACGCCGTAATGAAGAAATGTCACCGATTGACTTGAAACACGAAATCAAACCACACCCAACGAACCGCGAAAGAAACTacgaatgcgaaatttgcacgaaGCGCTTCACGACCAAGCAGTATCTATCGACCCACTTGCAAATACACACCGACGAGAGGAACTTcgagtgcgaaatttgcgcgaAACGCTTCGCGACGAAACTCTACCTTTCGAACCACGCGAAAACACACGCGGGTGTTAAAAAGCACGCgtgcgaaatttgcaagaaaCGCTTCACGACCAGACAGTATTTGTCGACGCACTCGCAAATACACGccggcgaaagaaattacaatcACGAGTGCCGAGTTTGCACGAAACGCTTCACGACGAAGCAGCACCTGTCGAACCACGTCAAAATACACACGGGCGAGAGGAACCACCGGTGCGAGATTTGCACGAAACGTTTCATAACGAGAGGCGAACTGTTGAAGCACGCGGTGAGTCACACCGGCgagagaaattacaaatgcgacgtttgcggTAAATGTTTTAGAGTGAAAGGCAATTTGTCGACTCATTTGCGGATACATAGCAACGAACGCAGTTACAAGTGCCAAACGTGCACGAAGAGCTTCAACACGAAACAGTGTCTGTGGAACCACGCGAAaatacacaccggtgaaagaaacTACAAGTGCGGCGCTTGCGAGAAAAGCTTCACGACGAAGCAGTACCTGGCGAACCACGTCCAgacgcacaccggcgagagaAAGTACAAGTGCGAGGTTTGCGCGAAACGTTTCACGGCGAAGAAGCACCTTTCGGATCACGTCAAGATACACACGGGCGAGAGGAATCACGAGTGCGAGATTTGCGCGAAGCGTTTCATAACGAAAAGCGATCTATCGAGGCACGTAAAAATGCACGGCGGCGAAAGACGTCACGTGtgcgaaatttgcacgaaacGTTTTGTAACGAGACAAAATCTTATGCAACATTTGAAAACGCACACCGGCGAACGTAATTACAAGTGCGAGATTTGCACGAAGCGCTTCCAAGCGAAAGCACATTTATCGTCTCACATGGCGGTACACGGAGGTGAAAAAAATCACGCGTGCGAAATTTGCGCTAAGTATTTTGTGACGAAAAGCGATTTAACGAATCATATGAAAGCTCACGCGGGTGCGTACGAGGCAcgttacaaatgtgaaatttgcacgaaGCGTTTCACGACGAAGCAAAGTCTTTCGAATCACTCGCGGATACACACCGGCGAGAAAAATCACGAGTGCGAAGTTTGCGCGAAGCGCTTCACGACGAAACAGTACCTGTCGGTTCACGCGAGGATACACACGGGCGAGAGGAATTACAAGTGCGAGATTTGCGCGAAATCGTTTACGACGAAAAGCAATCTTTCGACTCATACGACGGTGCACACCGGCGtaagaaattacaagtgcgatGTTTGCGCGAGACGATTCGTCGTGAAACGTGATCTGTCGAATCACGTGAAgacgcacaccggcgagagaAACTACAAGTGCGACGTCTGCACGAAAAGCTTCATAACGAAACGCGATCTGTCGAATCACGTGAAGGTGCACACCGGCGAGACGAATCACAAGTGTGAGGTGTGCGGAAAGTGTTTTTTAAGGAAACGCGGTTTGTTGGATCACTCGAAGATGCACGTCGATGAACGTAATGTGTGTGAAGTTTGTAATAAGTGCTTTGCAACGAAACAAAGTTTTTTGGAACATGTGAAGATACACGTTGAAGAAAACGAATTAATTACGCACTGGCAAGAAGAACATGTACAAAAATTTAATGACGTTCGTGGTAAGATTGAAGAAAGATTGGTTAAGGAAGAGGTTGTTACGTTcgtcaaaattgaaaagttgGAGGACGATTACGCCGACATCTGTAACACAATAAAAATGGCGACCGACATATACGACTCCAACTACACAATCAACGAAGTAAAACTCGAACCAACAGAATTCGAATCTCCGTACGCATATCCAAACGTCGAAAACGCCGTTGCGATAAAAAAAGAGGAATATGGTCCTGACGCGACGGAGGAAATAAAACTCGACACCGTCGACACACCACAAACCATTTCAAGCGTCGGAATCGGATGCGATGACATAAAAATGAAGTTCGATCTCAGCGATGACCCGTCAGGTGGCAACGAGGAACTAATCGAAGAAAAATCGACGAATTCGTGCAAAATTTGCGGCAAGTCCTTCAAAACGAAGCAGCACCTATCGAAACACCTGAAGATACACACAGGTGAGAGAAATCACGCGTGCGAAGTTTGCGCGAAACGTTTCACCACGAAGAAATACCTGTCGGCCCACGCGAAAACGCACACCGCCGAAAGGAACCACGAGTGCGAGACTTGCGCGAAGCGCTTCGCCACGAAACAGTATTTGCTGGCACACGCGAAAATACACACCGGCGAGCGTAACTATAAATGCGAAGTTTGCACGAAACGCTTCACGACGAAGCAGTATCTGTCGACGCACCTGCAAGTGCACGCCGGCGAATCGACTTACAATTACAAGTGCGATTTTTGCGCGAAACGCTTCACGACGAAGCAACACCTGTCGTATCACACGACGATACACACGGGCGTGAAAAATTACAAGTGTAAAGTCTGCGGTAAATGTTTTGTAATGAAGCGTGGGTTGCTCGAACATGCGATGACGCACACGGGTGAAAGGAACTTCAGGTGTGAAATTTGTACGAAGTGTTTCAGGATAAAAGGCAATTTGACGACGCACATGCGGATACACACGAACGAACGGAGCTACAGGTGCCAGGTCTGCCCGAAACGCTTCAACACGAAGCAGTGTCTGTGGAACCACGCGAAaatacacaccggtgaaagaaacTACAAGTGCGACGTCTGCTTGAAACGCTTTGTGACGAAAAGCGATCTATCGAGACATACGAAAATACACACGAGCGAGAGAAACTACAAGTGCGAGATTTGCACGAAACGGTTTAAAACGAGAAGTATTTTGTCGATTCACGCAAGACTGCACACCGACGAAAGAAATTACCAGTGCGAAGTGTGCTCAAAGTGTTTCAAGACGAAAACTATTTTATCGACGCACTTAAGAGCGCACAACGGCGAAGCGAATCATACGGGCGACGAAAACTACCAATGCGCAACTTGCTCGAAATGTTTCACCGCCAaacaaaatcttttaaatcACCTGCAAATACACACCAGCGAAAGAAACTTCAATtgcgaaatttgcacgaaacGTTTCAAAACGCGAAGCAATTTATTGACGCACGTGAAAGTCCacgagaaaaattacaaatgcgaaatttgcgccaAATCCTTCATAACGATACACGAACTGTCGAATCACGTGAAGTTGCACACCGGCGAAAGGAACCACGAGTGCGAGATCTGCGCGAAACGCTTCACGACGGAAAAGTACCTGTCGTACCACGCGAAAATACACGGCGGCAACCGAAACCACGAGTGCGAGATTTGCGCGAAGCGCTTCACGACGAAGCAGAGACTGTCGACGCACACGCAGATCCACACCGGCGAGAGAAACTACATGTGCGAGGTTTGCACGAAGCGCTTCATAACGAAGCAGAACCTCCTGCGACACATGAAGACGCACACGGGCGCGAGAAGTTACGAGTGCGGATCGTGCACGAAACGCTTTGCGACGAAAAACAGTCTGTGGACTCACATGACGGAGCACACCGACGAGAGGaactacaagtgcgaaatttgcggcGGACGCTTTGCGACGATACCCGATCTGTCGGATCACGCGAAAGTGCACTCGGGCGAGAGGAATTACAAGTGCGAGGTTTGCGCGAAGCGCTTTGCGTCGAAACAGAATCTTTTGAAACACGTCGGAATGCACGAGGAAGAAGGAAATGAGTTTTCGGAAGAAAACGTGTGTTTGCGAAAATGTCCGTGCGACGTTGAGAAAGGATTGATTAAGGAGGAGGTTGTTGCGTTCGTAAAAGTAGAGAAATTGGAGATTGACAATGATAAAATGGAGGAGATTGACGTGAACGATTTAAATTCGATTGTCGAAGTAAAATCCGAACCGGTAGAATGTACGACTTTGTTCCCAAAACTGCGGCCTTTATATTCTCCCGTCGATGTTGACCGAAAGAAAATGGAATGTGTCGCTACCGTCAAGGAAGAGAAATACGAAGTTTCACACGTTGGAATCGCAGCCGATGACATCAGGATTAAGTTGGACCTCGACGATGACGATCCGTCGAATTCCGAAACGAGAAAATTTGCGTCGGAGGAAATGAATTTACGCGCCGTAGAAAAAAGTCGAGGTGAGCTCGGTACCGCGATTTTCCAAACGGAAGATTTTACGCGCGATGGAGGAAACCACGAATGTGACGTTTGCACGAAATCATTCTCGACGGAGGAATTTCTTCAGAGACACATGAAAATGCACAACAGAAAAATTCATTACAAATGTAAAGTTTGCGACAAACGCCTCAAAACCAAACTGTATTTGGCACGACACGTCGAAACACACAGCGAAGAAAGAAatcacaaGAATTTAAAAAGTGGTGATTTATATTACGGTAAGTCCTTTCGCTAG
Protein Sequence
MATHIYDFNVTASEVKPEPTKFATLTPKPQLHHEPRKTIETAVVKKEECVSDLLTEIKVDAVGVTKDVSNIGSGCSDIKIKLDLGDDNLSNSRRNEEMSPIDLKHEIKPHPTNRERNYECEICTKRFTTKQYLSTHLQIHTDERNFECEICAKRFATKLYLSNHAKTHAGVKKHACEICKKRFTTRQYLSTHSQIHAGERNYNHECRVCTKRFTTKQHLSNHVKIHTGERNHRCEICTKRFITRGELLKHAVSHTGERNYKCDVCGKCFRVKGNLSTHLRIHSNERSYKCQTCTKSFNTKQCLWNHAKIHTGERNYKCGACEKSFTTKQYLANHVQTHTGERKYKCEVCAKRFTAKKHLSDHVKIHTGERNHECEICAKRFITKSDLSRHVKMHGGERRHVCEICTKRFVTRQNLMQHLKTHTGERNYKCEICTKRFQAKAHLSSHMAVHGGEKNHACEICAKYFVTKSDLTNHMKAHAGAYEARYKCEICTKRFTTKQSLSNHSRIHTGEKNHECEVCAKRFTTKQYLSVHARIHTGERNYKCEICAKSFTTKSNLSTHTTVHTGVRNYKCDVCARRFVVKRDLSNHVKTHTGERNYKCDVCTKSFITKRDLSNHVKVHTGETNHKCEVCGKCFLRKRGLLDHSKMHVDERNVCEVCNKCFATKQSFLEHVKIHVEENELITHWQEEHVQKFNDVRGKIEERLVKEEVVTFVKIEKLEDDYADICNTIKMATDIYDSNYTINEVKLEPTEFESPYAYPNVENAVAIKKEEYGPDATEEIKLDTVDTPQTISSVGIGCDDIKMKFDLSDDPSGGNEELIEEKSTNSCKICGKSFKTKQHLSKHLKIHTGERNHACEVCAKRFTTKKYLSAHAKTHTAERNHECETCAKRFATKQYLLAHAKIHTGERNYKCEVCTKRFTTKQYLSTHLQVHAGESTYNYKCDFCAKRFTTKQHLSYHTTIHTGVKNYKCKVCGKCFVMKRGLLEHAMTHTGERNFRCEICTKCFRIKGNLTTHMRIHTNERSYRCQVCPKRFNTKQCLWNHAKIHTGERNYKCDVCLKRFVTKSDLSRHTKIHTSERNYKCEICTKRFKTRSILSIHARLHTDERNYQCEVCSKCFKTKTILSTHLRAHNGEANHTGDENYQCATCSKCFTAKQNLLNHLQIHTSERNFNCEICTKRFKTRSNLLTHVKVHEKNYKCEICAKSFITIHELSNHVKLHTGERNHECEICAKRFTTEKYLSYHAKIHGGNRNHECEICAKRFTTKQRLSTHTQIHTGERNYMCEVCTKRFITKQNLLRHMKTHTGARSYECGSCTKRFATKNSLWTHMTEHTDERNYKCEICGGRFATIPDLSDHAKVHSGERNYKCEVCAKRFASKQNLLKHVGMHEEEGNEFSEENVCLRKCPCDVEKGLIKEEVVAFVKVEKLEIDNDKMEEIDVNDLNSIVEVKSEPVECTTLFPKLRPLYSPVDVDRKKMECVATVKEEKYEVSHVGIAADDIRIKLDLDDDDPSNSETRKFASEEMNLRAVEKSRGELGTAIFQTEDFTRDGGNHECDVCTKSFSTEEFLQRHMKMHNRKIHYKCKVCDKRLKTKLYLARHVETHSEERNHKNLKSGDLYYGKSFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-