Gspi031654.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Geotrupes spiniger
Gene Symbol
-
Assembly
GCA_959613385.1
Location
OY390740.1:4361964-4375514[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 57 0.0012 0.085 14.4 1.4 2 23 86 107 86 107 0.97
2 57 2.4e-05 0.0017 19.7 2.1 1 23 112 134 112 134 0.99
3 57 0.00079 0.056 15.0 5.3 1 23 140 162 140 162 0.98
4 57 0.071 5 8.8 5.2 1 23 168 190 168 190 0.97
5 57 4.4e-05 0.0031 18.9 5.3 1 23 196 218 196 218 0.99
6 57 3.1e-05 0.0022 19.4 0.1 1 23 224 246 224 246 0.98
7 57 0.00013 0.0092 17.4 2.5 2 23 253 274 252 274 0.98
8 57 6.5e-05 0.0046 18.4 9.6 1 23 280 302 280 302 0.99
9 57 4.1e-05 0.0029 19.0 2.0 1 23 308 330 308 330 0.99
10 57 7.7e-05 0.0054 18.1 2.4 1 23 335 357 335 357 0.99
11 57 0.007 0.49 12.0 2.4 1 23 363 385 363 385 0.95
12 57 6.8e-05 0.0048 18.3 1.0 1 23 391 413 391 413 0.99
13 57 6.4e-06 0.00045 21.5 1.2 1 23 419 441 419 441 0.98
14 57 5.2e-06 0.00037 21.8 3.9 1 23 447 469 447 469 0.98
15 57 0.11 7.9 8.2 0.3 8 23 663 678 662 678 0.94
16 57 0.0011 0.077 14.5 2.5 2 23 685 706 684 706 0.97
17 57 1e-05 0.00074 20.9 2.5 1 23 712 734 712 734 0.99
18 57 0.00047 0.033 15.7 2.7 1 23 740 762 740 762 0.98
19 57 0.0029 0.21 13.2 1.0 1 23 768 790 768 790 0.98
20 57 5.7e-05 0.004 18.5 2.5 1 23 796 818 796 818 0.97
21 57 0.0003 0.021 16.3 6.5 1 23 824 846 824 846 0.99
22 57 0.00016 0.011 17.2 0.6 1 23 852 874 852 874 0.98
23 57 7.3e-06 0.00052 21.3 3.1 1 23 880 902 880 902 0.99
24 57 0.0002 0.014 16.8 5.3 2 23 909 930 908 930 0.96
25 57 0.00011 0.0077 17.7 2.0 1 23 936 958 936 958 0.99
26 57 0.00016 0.011 17.1 2.0 1 23 964 986 964 986 0.98
27 57 6.2e-05 0.0044 18.4 1.5 1 23 992 1014 992 1014 0.98
28 57 0.0034 0.24 12.9 3.8 1 23 1019 1041 1019 1041 0.97
29 57 5.6e-05 0.004 18.6 2.4 1 23 1129 1151 1129 1151 0.98
30 57 5.2e-06 0.00037 21.8 1.4 1 23 1157 1179 1157 1179 0.99
31 57 0.0046 0.32 12.5 8.3 1 23 1185 1207 1185 1207 0.97
32 57 1.2e-05 0.00083 20.7 1.2 1 23 1213 1235 1213 1235 0.99
33 57 0.00011 0.0078 17.6 3.3 1 23 1241 1263 1241 1263 0.99
34 57 0.00014 0.01 17.3 2.1 2 23 1269 1290 1268 1290 0.97
35 57 0.00015 0.01 17.3 3.6 2 23 1296 1317 1295 1317 0.97
36 57 0.00059 0.041 15.4 2.9 1 23 1323 1345 1323 1345 0.95
37 57 0.00068 0.048 15.2 2.9 1 23 1351 1373 1351 1373 0.98
38 57 0.00041 0.029 15.9 7.2 1 23 1379 1401 1379 1401 0.98
39 57 0.0017 0.12 13.9 5.6 1 23 1407 1429 1407 1429 0.98
40 57 0.00013 0.0089 17.5 0.7 1 23 1435 1457 1435 1457 0.97
41 57 0.0016 0.12 13.9 1.1 3 23 1464 1484 1463 1484 0.97
42 57 0.00011 0.0075 17.7 6.9 1 23 1490 1512 1490 1512 0.98
43 57 0.0052 0.37 12.4 1.2 1 23 1518 1540 1518 1540 0.98
44 57 0.23 16 7.2 2.7 1 23 1546 1568 1546 1568 0.98
45 57 5.6e-05 0.004 18.6 2.4 1 23 1670 1692 1670 1692 0.98
46 57 2.3e-05 0.0017 19.8 2.0 1 23 1698 1720 1698 1720 0.97
47 57 0.0065 0.46 12.1 8.7 1 23 1726 1748 1726 1748 0.97
48 57 1.2e-05 0.00083 20.7 1.2 1 23 1754 1776 1754 1776 0.99
49 57 0.00011 0.0078 17.6 3.3 1 23 1782 1804 1782 1804 0.99
50 57 2.8 2e+02 3.8 1.1 2 13 1810 1821 1809 1828 0.86
51 57 0.00015 0.01 17.3 3.6 2 23 1834 1855 1833 1855 0.97
52 57 0.00054 0.038 15.5 6.8 1 23 1861 1883 1861 1883 0.98
53 57 0.0013 0.092 14.3 0.9 1 23 1889 1911 1889 1911 0.98
54 57 0.00013 0.0089 17.5 0.7 1 23 1917 1939 1917 1939 0.97
55 57 0.00076 0.054 15.0 1.0 2 23 1945 1966 1945 1966 0.97
56 57 0.00066 0.046 15.2 9.2 1 23 1972 1994 1972 1994 0.98
57 57 0.026 1.8 10.2 1.7 1 23 2000 2022 2000 2022 0.98

Sequence Information

Coding Sequence
atggAAATTGGCGTAAACGATTCCATCTCGGATATAAAAGTAAAATCTGAAACGATtgaatgtacaaaattattcacaaaaccgCAGTCGTGCTGCGGATATTCTCCTACTGATGTTGACCACGAAAAAGTAGAATGTGCTGTTACCCCAAAGGAAGAGAAATGTGAAATTTCAAATACCGAAGTTGCCCccgatattaaaattaagtcgGAGCCAAACGACGACGATTGCGTACGCCCCAATGAAAGAAACAACACATGCGACATTTGCACAAGATCATTTGCAACGAAATATATTCTCAGGACTCACATGAAAAATCACGACAAAACGAGCTACAAATGCGACATTTGCACGAAATCGTTTGCGACGAAATATATTCTCAAGACCCACATGAGAAATCACAACGACAAAAGGAGCTACCAATGTGACagttgcaacaaatgcttcacgacGAAATCGAATCTATCGTTCCACGTCCaaacgcacaccggcgaaagaaaccacaaatgcgaagtttgcgGCAAGTGCTTCTTAACGAAGCAACGTTTATCGCGGCACTCCGCAACGCACACCGGAgatagaaattacaaatgcgaaactTGCGGCAAATGCTTCACGAGGAAGGATCGTCTGTCGTACCACGTCAAgacgcacaccggcgagagaAACTacgaatgtgaaatttgcggcaAACGTTTCATAACGAAAGCCGGCGTATTGCAACACATCTCGACGCACGACGCagaaagaaacaataaatgtgaaatttgcaacaaatgcttcgcaACGAGACGGTATCTGCTGGAACACGTCAACACGCACACCGCACAGAGGAATTATAAATGCGACgtttgcaagaaatgcttcaCAACTAAACATCATCTGACGGAACACGTCAAGACGCACACCGGAGatcgaaattacaaatgcgCGATCTGCGGCAAGTGCTTCGCAACGAAACAGTACATATCTGAGCACATCAAGACGCACAgtggaagaaattacaaatgcgaactTTGCGGCAAATGTTTGTCAACGAAACAAAGCCTACTGGAACACGTCAAGACGCACGGCGGAGAAAGAAAccacaaatgcgacgtttgcggCAAGTGTTTCGCAACTAAACAAATTCTAGCTTACCACGCCAAGAtacacaccggagaaagaaattacaaatgtgcaACTTGCAACAGGGGCTTCACGAAGAAGCAAAATTTAGCGGGACACATCAAAACTCACACCGGGGAAaggaattataaatgtgaaactTGCGGCAAACGCTTCACAACAAAAGAACTTCTATCGCAGCACGTCAAAGGACAcgccaaagaaaaaaattatgaatgcgaaatttgcaagaaatgcttcaCGACAAAGCCAAATCTTTCAAAACACGTCAAGAGACATTCTACAAAAATGTTGGAGGATATGAAAACGTACACTGAAGAGAGAGAGTCACACTTTCAATGTATCATGCAGACGTCTACAACAGAGGAAATTAGTGATATTGACAAACAGTTTATTAAAACAGAGACTGGCGTATTCCTTAAggaagacaattttgaaaacaactatgCTAAAATGGACAGTGATTCAAATGACAACAAATTCACGACAACCGAAGTCAAACTTGAACCAACGGAATTAGCAATCTTGGTCCCAAAACCGGAACCTTGTTGTGGATATCCTGACGTTGCGATAAAGGACGAAGAATCGGTACATCCTTCGCCGATAACAGAAACAAAACTGGATGACGTTGGTTCCACACGAAATGTTTCAAAGACTGAAAGTGCATGTGATGATTTTAACGGTAAATTGGGTCTCAATTTGTTCAATCCGGAGCAAGGTGAACAAGAGGACGTATTTGAAAATAGCAACGAAACGTCGAAAATTACTCACcACCGCAAATCGAACAACCGTTGTGATATCTACATCAAGAATTCTGGTTTGGGGAAcagtattttcaaacaaataacaGGGGGTGAAGAAAGTTATAAAACGAAACAAAATCTATTCGAGCACATGAaaacgcacaccggcgaaagaatCTCCAAGTGTGAGATTTGCATGAAGTGCTTTGCAACTAAAGATAGTCTGTCGCTCCACATGAAATTGCACACGGGCGAGAGAAACTACAAGTGCGAAACTTGCGCGAAGCGGTTCACACGAAAACAAAATCTGCTGCGTCACGTGCAAACGCACACCGTCGAAAGAAACCACGAATGCGACGTTTGCGGCAAGCGCTTTCGAATGAGGGAAGGTAAGTCACGTCACATGAAAACGCATTCCAGcgacaaaaattacgaatgcGAAATTTGCTCTAGGCGTTTCAGAACGAAACAAATTTTATCGGAACACGTCAAGACGCACGTCACCggaagaaatcacaaatgtgaaatttgcacgaaacgCTTCACAACGAGCGACAGTCTCGTCGTGCACACGAAACTGCACACCGGCGAGAGAAATTTCAAATGCGAAACGTGCGCGAAATGCTTCACGAGGAAGCAAACGCTCACGCAACACACGAAAACGCACGTCGACGAACGGAACTACGAATGCGATGTTTGCACGAAGCGATTCACAAGAAAGGAAGCCATGTTGGAACATTTGAAATTGCACActggtgaaaaaaattacaaatgtgataTTTGCACCAAGTCCTTCACGAAGAGGCAATATCTGTCGGAACACATGAAAACGCACAACCGGGAAAGTAATTGCAAATGCGACGTGTGTAACAAATGTTTCACGAAGAAAGCCAATCTGTTGTTGCATATAAAAttgcacaccggcgaaagaaattacaaatgcgacgtttgcgcGAAACGCTTCACGAGGAAGCAAACTCTGCTGCAACACACGAAAATACACTCCGgagaaagaaactacaaatgtgaactCTGCACGAAATGCTTCAGGAGGAACGAAGGTTTGCTGGAGCACGTGAAAGCGCACAGCGGTGAAAGAagttacaaatgtgaaatttgcaataaatattttataaggaAGCAAACCATGTTGAAACACATGGAAGTGCACACCGGTGGAAATTACAAATGTCatatttgcaaacaaattttcaGCAAAAGGAAACTGTTGTTGGAACATAAAAAAGGACATAGTGAGGAGGAGTCCCTTCGTATGTGTGACGTTGAAAGATTTGTTAAAGAAGAAACATTCATAGAAGAAAAATTGGAGATCAATATCGACGAAATGGAATTCAATGAAACCAATTTCACGACGACCGAAGTAAAACTCGAACCGCAATTTACAACCTTCATCCCAGAACTGCAGTCTTCCCATTTCGACGTGGAAAGCACCATTAAAGGAGAAAACAACGCTATCAACGAAGAAAAATACGTGCACCCAAACAGGGGgaaatataaatgtgaaaaGTGCACCAAACGTTTCGCGACGAAACAAACCCTGTCGCGACACGCGAAAATACACAACAGCGAAAcgaattacaaatgtgaaatttgcacgaaaaGCTTCGCAGTAAAACAGAGCCTGTCGAGACACATGACGACACACACCAGCGAACGAAACCATAAATGCGAGCTGTGCACGAAACGCTTCACAACTAAATACTGTTTGTTGCGACACACGAAATTGCACACGTcagaaagaaactacaaatgcgacgtttgtcCCAAACGATTTGCGCGAAAACAAAACATGGTGAAACATTTGACTACGCACGTTAccgacaaaaaatataaatgtgggATTTGCGGCAAGTGCTTCGCAACAGAACGATACATGTCGCAACACACGAAAACGCACTCCGGCAAAAcaaacaagtgcgaaatttgcggcaAATGCTTCAGAAAAAAACCAAGTCTTCTGGAACATGTGAAACTGCACATCGGTAAAAcaaacaagtgcgaaatttgcaacaaatgcttcgcGACAAAACAGTACCTTTCGTATCACATGAAGTTGCACACCGGCGAGAGAAACCACAAGTGCGAAACTTGCGGCAAATGCTTCGTGAGAAGACAGACCCTGTTGGAGCACGTCGAGGCTCACAACACCAAACGAAtctacaaatgcgaaatttgctcCAAGTGCTTCACACTGGAAACCAATATGTTGCTGCACATGAAACTGCACACCGGCGAGAGAAACCACAAGTGCAAAATTTGCGCGAAATGCTTCACGAGGAAACAAACGCTGATGCAACACGTTAAGACGCACGGCGGCGAACGAAACCATAAATGCGAGATTTGCAGTAAACGCTTCATAAGAAAAGAATGCATGGTGAGGCACGTCAAGACGCACGCGAACGAAAAAAACTACGAATGCGAACTTTGCGCCAAACGCTTCTCGACGAAGCAGAATCTATTGCAACACGTGCAGTTACACGCCGGCGATACGAACGATTGCGAAATTTGCGCCAAACGTTTCGCGACGAGACATTACCTCGTGCGACACGTGAAATTGCACGCCGGCAAAAAAAATCACAggtgtgaaatttgcagcaaatgctTCACAAGAAAACAGAATCTGTTGGAACACACGAAGACACACACCAGCAAAAAGAATTACCAGTGTGGGATTTGCACGGAATATTTCATAGGACACCGAAATTTCTTGAAACACATGGAAGTACACGCAAGTGGGGGAAATCATAAGTGTGACGTTTGCGAACAGATTTTCTACAAAAGGAAAGCGATGTTGGAACATAAGAAGTCACATGCTGAAGAAATTGAGGAGGAAGATTGTGTTCAGAGATTTCCACACAATATTCATAGAATTAGGGAGATTGAAAAAGGATTTATTAAGGAAGAGACgttcataaatgaaataaagtttgAGACTGATAATGATGAAATGGAATCCAAAGAAACCAATTTCACGACGACCGAAGTAAAACTCGAACCGCAATTTACAACCTTCATCCCGGAACTGCAGTCTTCCCAGTTCGACGTGGAAAGCACCATTAAAGGAGAAAACAACGTAATCAACGAAGAAAAATACGTGCACCCAAACAGGGGgaaatataaatgtgaaaaGTGCACCAAACGTTTCGCGACGAAACAAACCCTGTCGCGACACGCGAAAATACACAACAGCGAAACgaattacaaatgcgaaatttgcacgaaaAGCTTCGCAGTAAAACATAGCCTGTCGAGACACATGACGGCACACACCAGCGAACGAAACCATAAATGCGAGTTGTGCACGAAACGCTTCAAAACTAAATACTGTTTGTTGCGACACACGAAATTGCACACGTcagaaagaaactacaaatgcgacgtttgtcCCAAACGATTTGCGCGAAAACAAAACATGGTGAAACATTTGACTACGCACGTTAccgacaaaaaatataaatgtggaATTTGCGGCAAGTGCTTCGCAACAGAACGATACATGTCGCAGCACACGAAAACGCACTCCGGCAAGAgaaacaagtgcgaaatttgcggcaaatgcttgagaaaaaaaatggaacaCATGAAGCTGCACACCGGTAAAACgaacaagtgcgaaatttgcaacaaatgcttcgcGACGAAACAGTACCTTTCGTATCACATGAAGTTGCACACTGGCGAGAGAAACCACAAATGCGAAACTTGCGCGAAATGCTTCACGAGGAAACAAACGCTGATGCGACACGTTAATACGCACGGCGGTGAACGAAACCATAAATGCGAGATTTGCAGTAAACGCTTTATAACAGAAGAAGGCGTGGTGAGGCACGCGAAGACGCACGCGAACGAAAAAAACTATGAATGCGAACTTTGCGCCAAACGCTTCTCGACGAAGCAGAATCTATTGCAACACGTGCAGTTGCACGCCGGCGATACGAAcgagtgcgaaatttgcgccaAACGCTTCGCGACGAGACATTACCTCGCGCGACACGTGAAATTGCACGCCGGCGAAAAAAATCACAggtgtgaaatttgcagcaaatgctTCACAAGAAAACAGCATCTGTTGGAACACACGAAGACACACACCAGCAAAAAGAATTTCCAGTGTGGGATTTGCACGGAATATTTCATGGGACACCGAAATTTCTTGAAACACATGGAAGTACACGTATACTACCGTGTCACGGACCCCCCCAGCGTGAGGTTGTGTACGtaTGTAGGTTTACACACGAGTGCGAAAGACCTAGATATTGTGGAGAGGGAAGATGTCGAAAGCCCCGTTCATTAA
Protein Sequence
MEIGVNDSISDIKVKSETIECTKLFTKPQSCCGYSPTDVDHEKVECAVTPKEEKCEISNTEVAPDIKIKSEPNDDDCVRPNERNNTCDICTRSFATKYILRTHMKNHDKTSYKCDICTKSFATKYILKTHMRNHNDKRSYQCDSCNKCFTTKSNLSFHVQTHTGERNHKCEVCGKCFLTKQRLSRHSATHTGDRNYKCETCGKCFTRKDRLSYHVKTHTGERNYECEICGKRFITKAGVLQHISTHDAERNNKCEICNKCFATRRYLLEHVNTHTAQRNYKCDVCKKCFTTKHHLTEHVKTHTGDRNYKCAICGKCFATKQYISEHIKTHSGRNYKCELCGKCLSTKQSLLEHVKTHGGERNHKCDVCGKCFATKQILAYHAKIHTGERNYKCATCNRGFTKKQNLAGHIKTHTGERNYKCETCGKRFTTKELLSQHVKGHAKEKNYECEICKKCFTTKPNLSKHVKRHSTKMLEDMKTYTEERESHFQCIMQTSTTEEISDIDKQFIKTETGVFLKEDNFENNYAKMDSDSNDNKFTTTEVKLEPTELAILVPKPEPCCGYPDVAIKDEESVHPSPITETKLDDVGSTRNVSKTESACDDFNGKLGLNLFNPEQGEQEDVFENSNETSKITHHRKSNNRCDIYIKNSGLGNSIFKQITGGEESYKTKQNLFEHMKTHTGERISKCEICMKCFATKDSLSLHMKLHTGERNYKCETCAKRFTRKQNLLRHVQTHTVERNHECDVCGKRFRMREGKSRHMKTHSSDKNYECEICSRRFRTKQILSEHVKTHVTGRNHKCEICTKRFTTSDSLVVHTKLHTGERNFKCETCAKCFTRKQTLTQHTKTHVDERNYECDVCTKRFTRKEAMLEHLKLHTGEKNYKCDICTKSFTKRQYLSEHMKTHNRESNCKCDVCNKCFTKKANLLLHIKLHTGERNYKCDVCAKRFTRKQTLLQHTKIHSGERNYKCELCTKCFRRNEGLLEHVKAHSGERSYKCEICNKYFIRKQTMLKHMEVHTGGNYKCHICKQIFSKRKLLLEHKKGHSEEESLRMCDVERFVKEETFIEEKLEINIDEMEFNETNFTTTEVKLEPQFTTFIPELQSSHFDVESTIKGENNAINEEKYVHPNRGKYKCEKCTKRFATKQTLSRHAKIHNSETNYKCEICTKSFAVKQSLSRHMTTHTSERNHKCELCTKRFTTKYCLLRHTKLHTSERNYKCDVCPKRFARKQNMVKHLTTHVTDKKYKCGICGKCFATERYMSQHTKTHSGKTNKCEICGKCFRKKPSLLEHVKLHIGKTNKCEICNKCFATKQYLSYHMKLHTGERNHKCETCGKCFVRRQTLLEHVEAHNTKRIYKCEICSKCFTLETNMLLHMKLHTGERNHKCKICAKCFTRKQTLMQHVKTHGGERNHKCEICSKRFIRKECMVRHVKTHANEKNYECELCAKRFSTKQNLLQHVQLHAGDTNDCEICAKRFATRHYLVRHVKLHAGKKNHRCEICSKCFTRKQNLLEHTKTHTSKKNYQCGICTEYFIGHRNFLKHMEVHASGGNHKCDVCEQIFYKRKAMLEHKKSHAEEIEEEDCVQRFPHNIHRIREIEKGFIKEETFINEIKFETDNDEMESKETNFTTTEVKLEPQFTTFIPELQSSQFDVESTIKGENNVINEEKYVHPNRGKYKCEKCTKRFATKQTLSRHAKIHNSETNYKCEICTKSFAVKHSLSRHMTAHTSERNHKCELCTKRFKTKYCLLRHTKLHTSERNYKCDVCPKRFARKQNMVKHLTTHVTDKKYKCGICGKCFATERYMSQHTKTHSGKRNKCEICGKCLRKKMEHMKLHTGKTNKCEICNKCFATKQYLSYHMKLHTGERNHKCETCAKCFTRKQTLMRHVNTHGGERNHKCEICSKRFITEEGVVRHAKTHANEKNYECELCAKRFSTKQNLLQHVQLHAGDTNECEICAKRFATRHYLARHVKLHAGEKNHRCEICSKCFTRKQHLLEHTKTHTSKKNFQCGICTEYFMGHRNFLKHMEVHVYYRVTDPPSVRLCTYVGLHTSAKDLDIVEREDVESPVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-