Gspi034421.1
Basic Information
- Insect
- Geotrupes spiniger
- Gene Symbol
- SMARCC2
- Assembly
- GCA_959613385.1
- Location
- OY390741.1:14290473-14296179[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9 1.2e+04 -2.5 0.0 32 43 199 210 197 212 0.85 2 2 7.3e-14 1.3e-10 42.2 0.1 3 44 595 636 593 638 0.95
Sequence Information
- Coding Sequence
- ATGATCGCTTATGGCCCCAAAAAGGATGGTAGTCCAAACGCAAAGTATTTTGAATCACCAGAATCATTAGCAGCCTTGGAACTTGTAAAACAATGGCTTCAAAAGAACGTAAAAAAGTACATACAACCGGATCCACCGACGAATAAAAGTTTAGCAGCGCTAATAATACAATTCCTTCAGTTCCAAGAAGACAACCTTGGTAAAAATATACCAAAGCCGCCCATGACTAGAATACCGGTGAAATATTTCATGGATTTCAAGCCAGGCGGAGCACTATGTCAAATGCTGGCGTCGGCGTATCGTTTCAAAAGCGAACAAGGATGGAGAAGATTCGACATGCAAATAGGAAAAAGTATAGCTCGACTTGATAGGTTCGTTGAAATGTTTGGCTTAatggaaaaatgtttaattcaaaataaactgTACACACCACCCACTATTTACGTCAAGCCGGAAGTCGATAAGAATCTTGCCATCCGGTTGAAGGAAATCGTTCGTAAGAGAAACGGCCTGGTTGTTGATAACGAAGAAGCCGCGACGCACGTTTTGTACCCACATTGTGATCCGTTGGAAGAGGAATACGCCAGGCCAGGTCTTCGCAGGGACAAAATGATAATGATGCATTGGTATTATTTTCCAGACTCTTATGATACTTATGTGAATGTTGAAGGAGCTCTCGAAGGCTTGCCCATTGATATGACACCACCACACACTGGGCCATGGAGAGTTTCATCGACATGGTTATTGGATTCTGATCAATATAACGAATGGATGACAGAAGAGGACTATGAAGTCGATGAAATGGGGCGCAAGAAAATTCACAGGTTGAGAATGTCCGTTGAAGACTTGATGAATCCTTCGGGTGATTTAGATAGAAAAAAGAAACAGAAAAGGAAACGGTCTCCATCGCCTCCTCTTAAAGCTGGTAAACGAAAAAGTGGCAGAAGCCCTGCTGTTTGTAAGAAAACAAGACCCGAAGACACCGAATCTGAAGACTTAACGAAAGACATGGAAGAACCACTTCCTGAGCCGAACATCACCGAAGTAAGTCCTGTAACACCTGGTCCTCCTCCCGGCCAACCGGGTAAGAAAGATCATGAACTTCAACCATTGAAAGGTGGTTCTATCACAGATTTAGATGAAACTGAAGAACGTGGTGAAGATTCACAAACTGGTAAAAATAGTGACACGAACACGCAAGACGACGGCCAAGAAGATAATGTAACCGAACAAACACATCATATAATTGTACCGTCTTATTCGTCATGGTTTGATTATAACTCCATACATGAGATCGAAAAGCGGGCATTACCAGAATTTTTTAATggtagaaataaatcaaaaacacctGAAATATATTTGGCTTATAGAAATTTTATGGTGGATACATATCGGCTGAATCCCACGGAATATATAACTAGCACTGCTTGTCGTCGTAATTTGGCTGGTGATGTGTGCGCTATTATGAGGGTCCATGCGTTTTTAGAACAATGGGGTCTCATTAATTATCAAGTGGATACGGACTCTCGGCCTACGCCTATCGGACCGCCGCCTACTTCTCACTTTCACATTTTATGTGATACACCATCTGGTTTGCAACCAGTTAATCCACCAAAGACCTCGCAACCCAGCGCTGCTAAAACTTTGCTTGATTTGGATCGGATACAAGACGCTAAGAAAATAGACGCTAGTGATCAAATATCTGGATTTGGATTAAAATTAGATCAGTATAGTAAAAAGCCCGCCGctttaagaaataaaagtgcTGCATCTTTAGCGAGGGATTGGACTGAGCAAGAAACATTGCTGTTATTGGAAGGTTTGGAAATGTATAAGGATGACTGGAATAAAGTTTGTGAGCACGTTAGTTCTCGCACGCAAGACGAATGCATATTACATTTCTTAAGGTTGCCAATCGAAGATCCGTATCTGGACGATCCAGAGGCCGGTGGAGCCTTAGGCCCATTAGCATATCAACCAATACCTTTCAGCAAAGCAGGGAATCCTATAATGTCAACCGTCGCTTTCTTAGCATCAATAGTTGATCCCAGGGTCGCCGCTGCTGCCGCAAAATCAGCAATGAAcgaatttgcaagtattaaagaCGAAGTTCCCGCATCTATCATGGATGCACATTTAAAGAATGTCGAAGCTTCGTCGACCGATGGTAAATTCGACCCATCTGCTGGTTTGGCCCTCAGCGGTATTGCAGGTACTGTTCCAGAAAAAGAAGACGAcgataaaataaagaaagaagtagacgtaaaagaagaagagaaatcGCTCGATTCCGCAGACTCTAAGAAAAACGGGATCGAGTCAAACGAAGAGAAAACACCAGAGAAACTTACGATGAAAACCGAGCCTTCGGAGTCCGATAAAGACGAGAAAATGGACATCTCagatttaaaaatcgaaaaggtGATTAGAGACAGCGAAATGCAAAGCGCCGCCGCAGCAGCTCTAGCAGCTGCTGCCGTTAAAGCGAAACATTTGGCTGCCGTCGAAGAACGGAAAATTAAATCCCTTGTAGCTCTCCTGGTTGAGACGCAAATGAAAAAGCTCGAGATCAAACTAAGGCACTTTGAGGAACTGGAAACGACGATGGAACGCGAAAGGGAAGGTTTGGAATATCAAAGGCAGCAGCTTATTACGGAGCGGCAGCAATTTCATCTGGAGCAGTTGAAGGCTGCTGAGTTTCGTGCGAGGCAGCAAGCTCATCAACGATTGCAGGCTGAACAAGGGCAATGGGCACAACAGCAAACTTTGATTTCGCATTCGGTTCCGTCGGCAGAAACAGGTCCTAGTACGACTCCTACACCACCTTCGCCGCAAGCTGCCGCTGTGGCTTCCCCAGCACCTCCTCATCAtcatatttaa
- Protein Sequence
- MIAYGPKKDGSPNAKYFESPESLAALELVKQWLQKNVKKYIQPDPPTNKSLAALIIQFLQFQEDNLGKNIPKPPMTRIPVKYFMDFKPGGALCQMLASAYRFKSEQGWRRFDMQIGKSIARLDRFVEMFGLMEKCLIQNKLYTPPTIYVKPEVDKNLAIRLKEIVRKRNGLVVDNEEAATHVLYPHCDPLEEEYARPGLRRDKMIMMHWYYFPDSYDTYVNVEGALEGLPIDMTPPHTGPWRVSSTWLLDSDQYNEWMTEEDYEVDEMGRKKIHRLRMSVEDLMNPSGDLDRKKKQKRKRSPSPPLKAGKRKSGRSPAVCKKTRPEDTESEDLTKDMEEPLPEPNITEVSPVTPGPPPGQPGKKDHELQPLKGGSITDLDETEERGEDSQTGKNSDTNTQDDGQEDNVTEQTHHIIVPSYSSWFDYNSIHEIEKRALPEFFNGRNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTPIGPPPTSHFHILCDTPSGLQPVNPPKTSQPSAAKTLLDLDRIQDAKKIDASDQISGFGLKLDQYSKKPAALRNKSAASLARDWTEQETLLLLEGLEMYKDDWNKVCEHVSSRTQDECILHFLRLPIEDPYLDDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPASIMDAHLKNVEASSTDGKFDPSAGLALSGIAGTVPEKEDDDKIKKEVDVKEEEKSLDSADSKKNGIESNEEKTPEKLTMKTEPSESDKDEKMDISDLKIEKVIRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQWAQQQTLISHSVPSAETGPSTTPTPPSPQAAAVASPAPPHHHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00399040;
- 90% Identity
- iTF_01257957;
- 80% Identity
- -