Gspi013002.1
Basic Information
- Insect
- Geotrupes spiniger
- Gene Symbol
- bab1
- Assembly
- GCA_959613385.1
- Location
- OY390734.1:9007254-9010055[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-15 8.7e-12 45.6 0.1 1 45 365 409 365 409 0.97
Sequence Information
- Coding Sequence
- ATGGGAGGCACGGCTCAACAATACTGTCTACGCTGGAACAACCACCGCTCAAATTTACTAACAGTATTCGATGAACTTCTTCAAAACGAAGCTTTCACGGACGTAACGCTAGTGTGCGATGGCGGTGGTCCGATCAAGTGCCATAGGATGGTTTTGGCGGCATGTTCGCCTTACTTCCAGAACTTATTCACCGACTTACCCTGCAAACATCCTGTCGTTGTGTTAAAAGACGTCAAGTACTGCGAGATAAAGGCGATTTTGGAGTACATGTACAGAGGCGAAGTGAACGTGGCGCAGGATCAGCTTGCCGCGTTGCTGAAGGTCGCCGAAGCCTTAAAAGTCAAAGGACTGGTGGAAGAAAACCGAGCGAACGACCAAAACATGGCGAGGAGAAACGACGAATCGATGGACCATTCGCCTTCCGGCATAACGACGTCCACCCCACATACGCATTCGACTGTGCACAGCAGCAGTAGCAATGCTTCCCCGCCCCATTCGACGAACGCTGTGCCTTATAATAAAAATCCGTACAGTCTGTATGGAAAAGCGCCAGGGATCGAACGCAATTCCAGGATGAATATTCCCATGTGGGCGGTGCCCGGAATACCTTTGCCGCATCACCCATCCCCCGTACCTCCGCAGAATCATCCGCATACCGCCGCGACGGCTGCGGCGGTTATGCTCAGTAGCTGCTATGAAGCGGCCAGTTCTGATATGTCACCACTTAGACGAAAGAAACTATCCAGTTTATTGATGAACAGGGACACGCCGATACTACGAACGGTTTTGGGACAAGGACAGGCTGATTCTTCTCAACCAGTTAGCTTGGTTTGCCATCCCGATAGCCACCACGAAAATCTCAACTCGAACGGACCAGACGATAGACTTGAAAGGCATATGAAAAATGAACCCAATGAAGATGCCCAATCGCCATATACCGACATGTCCATCATGGACGACGACGAGAAACCGAAAATGGGAATGCCGTCGTCATCCCCTCAGTCCTATTCCGGCGAAATGAGAAGCATATCCTCTGGAATCGCAACCTACGTACCCAACCAGAAACCCGAATGGAAACGATACAAACAATACACACGGGACGATATCATGTCTGCAATAGAAGCAGTCCGCAATGGAATGTCTGCGCTTCAGGCTGCAAGGAAATACAGCGTGCCATCGAGGACGCTGTACGACAAAGTGAAAAAGTTGGGGATCACGACAAGTCGACCGTTTAAAAGGGGCACGAATGGAAGCACGGCGTGCTTCCCGTACGGCTTAAGTGGAACGAATTCGAATTACGACAACGAAGAACATGGAATGAATAATAATTCCGCACTGTTAGAAGCCAGCAGTTTCCTGCAGCATGCTTTGGATGGAAGGGTGGGCGATGAACGCGATGCTTTGGCGGCGATGGCGGCGGCAGCCGCCGCTCATGCTGCAGCCACAGGTCATTCAACGAGTCCCCCGAGCCATGGAATGGGTGGGTCGCCGATTCCCAGTCCGAGTTTGGCGAAATATATGCGCCAGGTTAGTTTGACGCCGTCTCCGGCACCGTGCAGTGAACACAATCACAGCGAAACGAATGGAAGTTCTGAACGAGAACGGGATGACGATGATGATCAGGTTGAGGATTTGTCGATAAGTCGAAAACAGGAATCCAGAGTGATCATGCCGCCGATGAATCACGTTTCGACGATCATAAAGAAGGAAGACTTAATGAAAGACGTGTATGCAGATGATATGCGTCGGGAGGTAAGCATGGAAGAAGCAGAatag
- Protein Sequence
- MGGTAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLVCDGGGPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYCEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRANDQNMARRNDESMDHSPSGITTSTPHTHSTVHSSSSNASPPHSTNAVPYNKNPYSLYGKAPGIERNSRMNIPMWAVPGIPLPHHPSPVPPQNHPHTAATAAAVMLSSCYEAASSDMSPLRRKKLSSLLMNRDTPILRTVLGQGQADSSQPVSLVCHPDSHHENLNSNGPDDRLERHMKNEPNEDAQSPYTDMSIMDDDEKPKMGMPSSSPQSYSGEMRSISSGIATYVPNQKPEWKRYKQYTRDDIMSAIEAVRNGMSALQAARKYSVPSRTLYDKVKKLGITTSRPFKRGTNGSTACFPYGLSGTNSNYDNEEHGMNNNSALLEASSFLQHALDGRVGDERDALAAMAAAAAAHAAATGHSTSPPSHGMGGSPIPSPSLAKYMRQVSLTPSPAPCSEHNHSETNGSSERERDDDDDQVEDLSISRKQESRVIMPPMNHVSTIIKKEDLMKDVYADDMRREVSMEEAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00466503;
- 90% Identity
- iTF_00740942;
- 80% Identity
- iTF_00740942;