Basic Information

Insect: Gastrophysa polygoni
Gene Symbol: Zfpm1
Assembly: GCA_963576655.1
Location: OY755082.1:51686324-51691608[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.5 5.9e+02 1.8 0.1 3 23 8 28 6 28 0.90

2 14 0.00079 0.073 14.1 0.1 1 23 549 572 549 572 0.92

3 14 0.0061 0.55 11.3 3.2 1 23 680 702 680 702 0.98

4 14 0.00041 0.038 15.0 1.9 2 23 705 726 704 726 0.97

5 14 0.0031 0.28 12.2 1.5 1 23 732 754 732 754 0.95

6 14 0.00018 0.017 16.1 7.0 2 23 761 782 760 783 0.94

7 14 0.94 86 4.4 2.4 5 23 796 814 795 814 0.95

8 14 0.0023 0.21 12.7 2.4 3 23 821 842 820 842 0.97

9 14 0.15 14 6.9 0.7 2 23 858 878 857 878 0.96

10 14 3.7e-05 0.0033 18.3 1.1 1 22 884 905 884 906 0.91

11 14 0.00032 0.029 15.3 0.2 1 23 914 936 914 936 0.99

12 14 0.0021 0.2 12.8 3.2 1 23 942 964 942 964 0.97

13 14 5.5e-05 0.005 17.8 4.2 1 23 970 992 970 992 0.98

14 14 0.0078 0.71 11.0 8.9 1 23 998 1020 998 1021 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.5	5.9e+02	1.8	0.1	3	23	8	28	6	28	0.90
2	14	0.00079	0.073	14.1	0.1	1	23	549	572	549	572	0.92
3	14	0.0061	0.55	11.3	3.2	1	23	680	702	680	702	0.98
4	14	0.00041	0.038	15.0	1.9	2	23	705	726	704	726	0.97
5	14	0.0031	0.28	12.2	1.5	1	23	732	754	732	754	0.95
6	14	0.00018	0.017	16.1	7.0	2	23	761	782	760	783	0.94
7	14	0.94	86	4.4	2.4	5	23	796	814	795	814	0.95
8	14	0.0023	0.21	12.7	2.4	3	23	821	842	820	842	0.97
9	14	0.15	14	6.9	0.7	2	23	858	878	857	878	0.96
10	14	3.7e-05	0.0033	18.3	1.1	1	22	884	905	884	906	0.91
11	14	0.00032	0.029	15.3	0.2	1	23	914	936	914	936	0.99
12	14	0.0021	0.2	12.8	3.2	1	23	942	964	942	964	0.97
13	14	5.5e-05	0.005	17.8	4.2	1	23	970	992	970	992	0.98
14	14	0.0078	0.71	11.0	8.9	1	23	998	1020	998	1021	0.95

Sequence Information

Coding Sequence: ATGGACTCAATTAACATAATATGTCCGGTTTGCACTCTCTACCTGCGTCCAGGAATCACTCTGAAACAGCATTTGACCTCCCATCCAAAACAAAAAGTAATAGAGGCCTTAGTCAAGCTTTCAGGTATAGATGACACTTCAAACACCAATGTGACATCTCCACAGCTGTCTCCTGTAGAGGCAAATGCATCAAGTCAGAGTGTTAGCAATGCTTGGAGCCAAGCTCCATCTGTCCAAATGGGGCCTGTACCTCAAGGGGCCCCCCCTCCTGGCAACCATGTATTCATTTATCAGCAGAGTATGAGTACTACAACTCCACAAAGTGCTGTTTTACAAGTCAACCCCCAACAATATGTGTACCCCCCCAATGTTTTCAATCCCATGATGATGATGCCATATGTGTATCAGCAGCAGCATGTTATTTTATCCAGTAATCCTTTGACACCACAGATTAGGTCTTTAGAAGCACCTTTGCCAACTCAAACTGTGGAGAATGTTATTGTTGATGCTATAGAGGAAAATACAGATGTAGATACAAAAAGTAGAATAGTCGAAGTCCCagaaaacagtgaaaaaataCAGGACATAGTAGAAATTGAGGAAGTAGAATTGGTCAAAAATTTgagtaataatgatgaaaatgacatGAAGAAACAGGAATGTGTTCTTGATAGAGTCCAAGATATAAAGACTATGGAAGATTTTGAGAATGAACGCATGATCCAAAGTGATATACCATCAGAAGGATATCTGTCTGAGAATGAAGAAGACTATGAGGACATTGATAACAGTTCAGAAGTTCAAAATTGTGAGCAGGTTGAGACACAAATAACAGAGAATGTAGGCTCAGCACAACAAGATTTGATGACAACTTGGAAAGAAGATACAGAGCTAAGTAAAGGATGCCAAACTCAGACAGCTAATAATGCTTCCCAAATTGACCAAGCTCCTTCAGTGATGCATGTAGATAGTCACTTTGTTCAAGACCAGGAGGATCACCCAGAGTATTTCTATGTGAATTCACGAAACGAGGATTATCTACCGCAACAAGAACATGTAAGCTATGATGAGCACCATAGACCTGCCTCAGTTTCCTATACTAGGATACAAACCTCTGAACAGTATGAGCAGACTGATCCTATTTATACCTCTGCAAATATTCTTCAGAGTAGTGACAATTTGGACTATGTGAATCTTGATGACATACTGATAATCAATGATTTCAACCCCAATCATGTGGTTGCACAAgttgaaaactttgaaaattCTTCGCCAGATCGTTCTGGGGTGCTTTTGACCATAGGGGAGTACCATGAACCCAGAGATTTCGAAGAGAGCATGTCACGAAGCAGTTCACAGGTCAATATTCGATCTGATGAAAGAATGCCTGCCCGAGGGGAATTATCTGGCCCTGAGAGCATGGGGGGGAGCAGTGATTTAACTTGGAATCGAATCCACTACCAAGAAGGGGGCTCTAGAATGTCGCATTCTTATGATCTGATTGGCAGAGATCACTGGGAAGGATCTGATAGCGAGAGTGTGGATAATCCTGAGGTGATGAAGAAACACAAAGAGTACCAGGAGCATTTCAATGAGGATAATGATCCTGTGAGCATAACAGGTTGCTCGGGCCCCCCACTGAACTTCAAATGTCCAGTTTGCGGGGAAGATTTTGCTACTTCTAAGGAGCGCAAGGCCCATGAACTGGAAATGCATCCAGATAAAACAAAGCGCAATATGATCGGCGGTGATATCGGCAAGAAAAAGGTGAGGAAGTTGGTGCTGAAGCTCAAGACTGACAAGACCATCACCAAGATGGAGGCTGAACCGAATTTCGATAATGTGTTTACCAACAAGTTGAAGCAAGAACATGTTAGTGAACCTCTGGAAGTCCTGGAACAACCTAAAATTGATGTGCCAACTTTGGAGCCACAAGATATGAAGACGATCTGTTCGATTTGCGATTGTGTGTGTTTGAACAGCAAAGTTTTGAAGCAACATAAGATGGAGATGCACAAGAATGATTCTGCTGTGAGACACAAGTGCGCCACTTGTGAAGAAACTTTTCCTAACGAGCACAAGTACACAGATCATCTGAAGGTGCATCCTTTAGAGTGCAAACTTTGTGGCAAGCTGTTTTTCAGGAGGCAGAACATTAGGCTGCACATGAAAAGGCATCTGGGCCTGAAGCCCTACAAATGCGAGTTGTGCGACAAATCGTTCATCACCCGACAAAAACGCGACGAGCACAAGAACATCCACACCGGCGAGCTGCCTCTCAAGTGCAACATGTGCGACAAGAAGTTCCGCAGACACTCCAACCTCGTGCAGCACAAGAACTTCCACCATCTCAACGTGAAGAAGAAGGTGAAAGACTACATTTGCCACTGCGGCGAGGTGTTCCATTCGACGAAGAAGCTGGCCTGGCACAAGGAGATCCACGACACGAAGCCGAAGGCGTGCTCGCAGTGCAGCGAAAAGTTCTTGCATCTGTCGAGTCTCACGAGGCATATGAGGCGGGCGCACAACGAAAAGTTCCTGCCGCAGGAGAAGAGGAAGGATGAGAACGTCGAGTGTCACATCTGCAAAGGTACTTATTTGAAGTCCTCGCTGGATGTACACATCAGGAACCACAGCGGCGCCAGGCCCTTCAACTGCCCCCTGTGCAACAAGGACTTCACTACCAAGTGGAACCTCAAGCTGCACCAGTGGACTCATGCTAGTCGCTCATCGAAGCCCTACAAGTGCGATCAATGCAACGCGGGCTTTATAAGgGAGAGCGATTACGTCGCTCACACCAACTCCCACAAGAGCATCCGCCCTTACACGTGTAACTATTGCGGCGCCCAATTCATCCGCAAATACAATTGTCTGAGGCACGTCAAGGAGCACGAGAGCGACAAAAGGTTCAATTGCACCGTATGCAGCAAATCCTTCCACCGATTGTACTATCTCAAGGACCACATGAAGGTTCATAGCGGCGTCAGACCTCACACTTGTCACATTTGCGGCAAAACCTCCAGCACGAAATCGAATCATAACAAACATGTACAGATCCATCATGCTAGGGAGCCGGTCAGCACCGAGAACTAG
Protein Sequence: MDSINIICPVCTLYLRPGITLKQHLTSHPKQKVIEALVKLSGIDDTSNTNVTSPQLSPVEANASSQSVSNAWSQAPSVQMGPVPQGAPPPGNHVFIYQQSMSTTTPQSAVLQVNPQQYVYPPNVFNPMMMMPYVYQQQHVILSSNPLTPQIRSLEAPLPTQTVENVIVDAIEENTDVDTKSRIVEVPENSEKIQDIVEIEEVELVKNLSNNDENDMKKQECVLDRVQDIKTMEDFENERMIQSDIPSEGYLSENEEDYEDIDNSSEVQNCEQVETQITENVGSAQQDLMTTWKEDTELSKGCQTQTANNASQIDQAPSVMHVDSHFVQDQEDHPEYFYVNSRNEDYLPQQEHVSYDEHHRPASVSYTRIQTSEQYEQTDPIYTSANILQSSDNLDYVNLDDILIINDFNPNHVVAQVENFENSSPDRSGVLLTIGEYHEPRDFEESMSRSSSQVNIRSDERMPARGELSGPESMGGSSDLTWNRIHYQEGGSRMSHSYDLIGRDHWEGSDSESVDNPEVMKKHKEYQEHFNEDNDPVSITGCSGPPLNFKCPVCGEDFATSKERKAHELEMHPDKTKRNMIGGDIGKKKVRKLVLKLKTDKTITKMEAEPNFDNVFTNKLKQEHVSEPLEVLEQPKIDVPTLEPQDMKTICSICDCVCLNSKVLKQHKMEMHKNDSAVRHKCATCEETFPNEHKYTDHLKVHPLECKLCGKLFFRRQNIRLHMKRHLGLKPYKCELCDKSFITRQKRDEHKNIHTGELPLKCNMCDKKFRRHSNLVQHKNFHHLNVKKKVKDYICHCGEVFHSTKKLAWHKEIHDTKPKACSQCSEKFLHLSSLTRHMRRAHNEKFLPQEKRKDENVECHICKGTYLKSSLDVHIRNHSGARPFNCPLCNKDFTTKWNLKLHQWTHASRSSKPYKCDQCNAGFIRESDYVAHTNSHKSIRPYTCNYCGAQFIRKYNCLRHVKEHESDKRFNCTVCSKSFHRLYYLKDHMKVHSGVRPHTCHICGKTSSTKSNHNKHVQIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00330998;
90% Identity: -
80% Identity: -