Gpol011083.1
Basic Information
- Insect
- Gastrophysa polygoni
- Gene Symbol
- ZNF711
- Assembly
- GCA_963576655.1
- Location
- OY755085.1:27760750-27764536[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00014 0.013 16.5 5.0 1 23 10 32 10 32 0.99 2 23 9.9e-06 0.00091 20.1 1.2 1 23 38 60 38 60 0.96 3 23 0.82 75 4.6 0.6 1 12 66 77 66 79 0.89 4 23 0.049 4.5 8.5 0.7 5 23 79 98 78 98 0.93 5 23 7.1e-05 0.0065 17.4 0.1 1 23 104 127 104 127 0.96 6 23 0.0057 0.52 11.4 1.4 1 23 132 154 132 154 0.96 7 23 0.16 15 6.9 0.6 1 13 163 175 163 176 0.91 8 23 4.7e-05 0.0043 18.0 6.3 1 23 184 206 184 206 0.99 9 23 0.00015 0.013 16.4 1.0 1 23 211 234 211 234 0.97 10 23 0.15 14 7.0 0.0 2 23 241 263 240 263 0.94 11 23 1.9e-05 0.0017 19.2 0.9 2 23 269 291 268 291 0.94 12 23 0.00011 0.01 16.8 3.1 2 21 297 316 296 317 0.94 13 23 0.0012 0.11 13.6 1.7 3 23 331 352 330 352 0.95 14 23 1.2e-06 0.00011 23.0 1.1 2 23 358 379 357 379 0.96 15 23 5.4e-05 0.0049 17.8 6.8 1 23 385 407 385 407 0.99 16 23 1.7e-05 0.0016 19.3 4.0 1 23 413 435 413 435 0.98 17 23 0.0017 0.16 13.0 0.3 1 21 441 461 441 462 0.94 18 23 0.00036 0.033 15.2 8.1 1 23 465 488 465 488 0.95 19 23 0.0032 0.29 12.2 0.1 1 23 493 516 493 516 0.95 20 23 2e-05 0.0018 19.2 0.5 2 23 523 545 522 545 0.93 21 23 0.39 36 5.6 0.1 2 23 551 573 550 573 0.91 22 23 1.3e-06 0.00012 22.9 3.2 1 23 578 600 578 600 0.99 23 23 0.00053 0.048 14.7 1.7 1 23 611 634 611 634 0.97
Sequence Information
- Coding Sequence
- ATGAGGACTCACACTGGCGAAGAACCATTCCAGTGCGACTTTTGCTTCAAGAGATTCAAAAGGAAGTTGAACATGCAGACTCATAGGCGGATACACACGAGAGAGAAACCGCACATTTGTGGGTTTTGCGAAAAAGCTTTCAGACAACAAAGTTCTCTGATAGTCCATAAAAGAATCCACACTGGAGAAAGGCCCCACGAGTGTTCCCATTGTTTAAAAAAGTTTATCACGAACCTATGTAGCGCTCGTTTCCAAACCTCCAAGTCGTTGCAGAAGCACGTGAAATCCTCTCACCGCGAGAAATCAGAATTCGAGTGTGAGCAATGCGATGCCACATTCCCCACTCTGGTTTCGCTCAAAAATCACCAAGATTCGGTCCATTCCGGCATCTCTTACTTGTGCGCACGATGCCAAAGGATCTTCATCAGCCGCCAAAAGTACGAATCGCATCTGAAAACGCACGATCCAGGCTACACCAAGAAGATGCATCAGTGCCAGTTGTGCCAGAAAAGCTACTCTGATCGGCACATCCCAGACTCATCACTGATCTACAAGTGTCAGATATGCGACAGATGTTTCGAGTCCTCGCAAACCTTGCACAGTCATATGTACACTCACACCGAAAAGATTTATAAGTGTTCTGAGTGTGGCGAGATTTTCGCGTTGCCCTGCCAACTCAGAGAACACAGAAAACAGATGCATTTCAAAGTCTCGTCTGTGAAGTGCGAATTTTGTGAGGGCACTTACCCCGATGAAACGAAATTGAATTCGCACGTCGAAATCGCGCATGAAGATCAACGGATCCCGTGCGGGTATTGCGGTTGCTCGTTTTCTAGGGCGTACAGCTTCAAAGAGCATATGATATACTATCATTTGGGAGTGATCCTCATGTGCGACCACTGTGACAGGGTATTCAAACATGAGTGCGATCTCCGAGTCCATATGAAAAGTCTGCAGCCGACAGCCAAACGTCGCATACGAAAAGGCCATTGCCGTCATTGTTCCACCGTATTCCCAAATATCTCTGCATTGAATAAACACATAGCTTCAGACCACAACGGCTTATCTTGGATATGCCATGTTTGTGGGAAAACGTTGAGTAGCAAATATAGCCTGCAGAACCATTTGAGGATTCATAACGGCGAGAAACCTTACGAGTGCGACTTCTGTCACAAGAAATTCAGCAGGTACCAGAATTTCAAGTCGCATAGGCGCATACATACCAACGAGAAGCCGCATGTCTGTGATTTGTGCGGTAAGGCTTTCACCCAACAGTGCACCTTGTCTATACATAAGAGGACTCATACAGGAGAAAGACCTTACCAGTGTGAAATTTGCTCGAGAAAATTCATCACCAAAACCGTCATGAAGGCGCATACGAATGATACCCTTTTTTGCTGCAACCATTGTAAGAAGCGTTTCACAGAAAAGGAGTACTTGAAGAAGCACATACTGAATAAGCACACCGAGAAAAAGTATTTTTGTGACATCTGCAACCGTTCCTTTGCTATACCCAGTATGGTGGTATCTCACAAGAACATAGTCCACCTCAAGTTATATATCACAAAATGTGAATTGTGCGAGAAAACTTTCACTACCAGGAGGGGCTTGAAAGTCCACATGGACGCGATCCATCCCAAACAGAGAGTTCCTTGTGATGTGTGCGGAGCTCTCTACAGCAGCAAGACTGCAGCGGAAAATCACAAGAAATTCCAACATCTAGGTCTCATTTATCCTTGCGATCATTGCGATAggattttccaaaataaataCAGTCTCAAAAGTCATTTGAGGACGCACGACCCTTTCTACGATCCTCCCATAATCAAACATCAGTGTTCGATGTGCCCGATGCAATACGTCTCTCGTACGGGTCTCAAACGTCATCAGTCTAGGATCCACACAAACAAGAATCCTTCCTGA
- Protein Sequence
- MRTHTGEEPFQCDFCFKRFKRKLNMQTHRRIHTREKPHICGFCEKAFRQQSSLIVHKRIHTGERPHECSHCLKKFITNLCSARFQTSKSLQKHVKSSHREKSEFECEQCDATFPTLVSLKNHQDSVHSGISYLCARCQRIFISRQKYESHLKTHDPGYTKKMHQCQLCQKSYSDRHIPDSSLIYKCQICDRCFESSQTLHSHMYTHTEKIYKCSECGEIFALPCQLREHRKQMHFKVSSVKCEFCEGTYPDETKLNSHVEIAHEDQRIPCGYCGCSFSRAYSFKEHMIYYHLGVILMCDHCDRVFKHECDLRVHMKSLQPTAKRRIRKGHCRHCSTVFPNISALNKHIASDHNGLSWICHVCGKTLSSKYSLQNHLRIHNGEKPYECDFCHKKFSRYQNFKSHRRIHTNEKPHVCDLCGKAFTQQCTLSIHKRTHTGERPYQCEICSRKFITKTVMKAHTNDTLFCCNHCKKRFTEKEYLKKHILNKHTEKKYFCDICNRSFAIPSMVVSHKNIVHLKLYITKCELCEKTFTTRRGLKVHMDAIHPKQRVPCDVCGALYSSKTAAENHKKFQHLGLIYPCDHCDRIFQNKYSLKSHLRTHDPFYDPPIIKHQCSMCPMQYVSRTGLKRHQSRIHTNKNPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -