Gpol019887.1
Basic Information
- Insect
- Gastrophysa polygoni
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963576655.1
- Location
- OY755090.1:16441818-16452781[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 1e-14 54.5 0.0 1 45 44 89 44 89 0.95 2 2 2.2e-18 1.8e-15 56.9 0.0 1 43 407 450 407 452 0.95
Sequence Information
- Coding Sequence
- ATGCGAATTGCCATGATCGATCATTCCACCGATTCCCGAGTTTTGGACCTCACCTCACCCCCCTATAATTTCAGTTATGGTTTCAGAGCGAAGCCCAGGATGTCCGCAGTGGCCGGCCGACGGACCTACACCGAGGACGAGCTCCAGGCAGCCCTCCGCGACATCCAGTCGGGCAAACTCGGCACGCGACGGGCGGCCGTGATCTACGGCATACCGCGCTCGACGCTGCGCAACAAGGTCTACAAGCTGGCGCTGGAGAAGGAGCGCGAGTCGCACCTGAGCAGCTCGACGACGCTGCGGCTGGAGGAGGAGGAGGCGATGGACGACGAGCGGGAGCTGTCGGGGGcggaggaggagaaggaggtGGAAAAGGCGCTGCAGGCGCCGCTGATCTCGATGGCGGATATCTTCAGATTCACCGGCAGAGATCAAGCACCACCTGACCTCCTTAAAAACTGCCTTCAGAAGAATAAGGATGGTCAAGACGCCTGGCCAAGTATGGACCACAGCGAAGTCGGTCCATACATTCAAAATCTTATCCTAGCGTCGCAGAACATATTGGCCAGCCAGAAACCTCCTGAGGCCGCGGTCATCAACCACATGATTCCAGAGCTCATGAAACAGATGATGGCAGAGGAGCAACTTTTGAAGTTGAAGAACAATAATGGAGATACTGATAGGTTGTCCAGGCCTAGTCCTAGTAACTCGGTCATAATGAAAGTTGAGAGGCCCAAATCCGAGTCAGATATGGAAACAGATGATTCCCCGTCTAATGTGATACTGAAAATTCCGTCCTTCAAACCCATGTCGAGTAAGAATGGATGTGATGTTTTTAGGCCTCAAGGAGAATCAACAGGCAGCATGATCTCGCCCCCCGTCACCTCCGAATCCTCCTCGCCGCCTATAATGCCCCCCTCCAAGGCCAGCCTGATCGTCAAGGACGTCAAGGACGTGATCGCGCAGAGCATCAGCCAGAAGTTCCAGCAGAGCATGGAGCCGCGCCGGCCCTCTGTCCTGGAGATGGGCGACTTCGGCAGGGGCGGCTACACGCCGCCCCTTGGGGCGGTCGGCATGTCGGCGATCAAGGCGCAGCAGGACTTGGGCAGGCACTACCAGCCGACGAGGACGCAGCAGAGCACGACTGGCGGCGGTGCGACTTCGAGTACGAGCACTGGAGGGAAAGGTACCCGACCGAAACGCGGGAAATATCGCAATTACGACCGCGACAGCTTAGTCGAAGCCGTCAGAGCAGTCCAAAGGGGGGAGATGTCCGTGCATCGAGCTGGCTCGTACTACGGTGTTCCTCACTCCACCTTAGAATACAAAGTTAAAGAGAGACATTTGATGAGACCGAGGAAAAGGGACCCCAAGCCCAATCCAGTTGACGAGAAGATTGCGAGTTTGAAGCAGAACGACTTGAGGCTAGCCGGGGATAAGATGAAGCCTATGATGAAACCGCCTCAAAAATTCTCGCCAACCTCGCCAAACGGCATGAAGCTGCCGGGCATGTTCGAGCCGGGCATGAGCCCGTTGGGGTACAGCGCGCCGCCCTTCCCGTTCTGGCACCCCGGCTTCCCGCACGTGCCGCTCGACTTTGCCACGGGCCGCAACCCGACGACGCCGCCGTTCGCGCCGCCGCACGCCGACTACTTCGCCTCGCAGATGATGCAGAAGCTGCAGGAGGAGTCCGCGAGGGCGATGGGCGGAGCAGCCCCAGGGAAGACCGTCGCAGGTGGTACCCCAGCGTTGGCCAAAAATGCTCGCCAGATGGCTGAGTCGTTGCTGGAAGGTCCAGGTGCAGCGAACGGCTCCTTCCTCGACGGCATCATTCGCTCCAGTCTCGAATCCGGAGTCCCGAACAGCGAAGGCAAATCCCCTAAAGAAGATAAGCATGTGGCCCCTGAGAATATGTCTAATAAGGCGTTGCTGGATCAGTTGTGTAGGAATAGTAGGTTGACGCCCTTGTCGAAACCTGCGGAAGGAAACAGTAGCGGGGACGAGTCGTATAGGAAAGGGTCGAGTCCACTCAACTTCTCAACAAGTGGCAACTCTCAACATGAAGACAACAATGACGACGATTCATCATCCAGATATGACAAAGACGGTTCTGAAGTCCACACCATCGAACTCTCGAACGACTCGAACGCTTCATCGATCGAGAGGAAGACCAACGACGAGGAACTCGTCCAGAAACCCAGAATCTATCTGAAACAGGATCTTGTAAAACCGGAAAATCTAAAACCGGAAATGCTGGTGCGCTTCCAGAACATAGTTTCGGATCACAATGGGCTGAACGAAAGTAGCGCATCAGAAAATGACGGTAATCAAGACTGA
- Protein Sequence
- MRIAMIDHSTDSRVLDLTSPPYNFSYGFRAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALEKERESHLSSSTTLRLEEEEAMDDERELSGAEEEKEVEKALQAPLISMADIFRFTGRDQAPPDLLKNCLQKNKDGQDAWPSMDHSEVGPYIQNLILASQNILASQKPPEAAVINHMIPELMKQMMAEEQLLKLKNNNGDTDRLSRPSPSNSVIMKVERPKSESDMETDDSPSNVILKIPSFKPMSSKNGCDVFRPQGESTGSMISPPVTSESSSPPIMPPSKASLIVKDVKDVIAQSISQKFQQSMEPRRPSVLEMGDFGRGGYTPPLGAVGMSAIKAQQDLGRHYQPTRTQQSTTGGGATSSTSTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLRLAGDKMKPMMKPPQKFSPTSPNGMKLPGMFEPGMSPLGYSAPPFPFWHPGFPHVPLDFATGRNPTTPPFAPPHADYFASQMMQKLQEESARAMGGAAPGKTVAGGTPALAKNARQMAESLLEGPGAANGSFLDGIIRSSLESGVPNSEGKSPKEDKHVAPENMSNKALLDQLCRNSRLTPLSKPAEGNSSGDESYRKGSSPLNFSTSGNSQHEDNNDDDSSSRYDKDGSEVHTIELSNDSNASSIERKTNDEELVQKPRIYLKQDLVKPENLKPEMLVRFQNIVSDHNGLNESSASENDGNQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -