Gpol019585.1
Basic Information
- Insect
- Gastrophysa polygoni
- Gene Symbol
- retn
- Assembly
- GCA_963576655.1
- Location
- OY755090.1:10622780-10633417[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-19 7e-16 58.9 0.0 18 89 15 84 7 84 0.93 2 2 3 1e+04 -2.5 0.0 25 37 235 247 197 262 0.58
Sequence Information
- Coding Sequence
- ATGATCTTACTAGACTCACGTGATAAATATAGTCCTATCTGCACACCAATAAACAGACTCCCAATCATGGCAAAATCGGTTTTGGATCTATACGAACTGTACAATCTAGTGATAGCTAGAGGTGGACTTGTGGAcgttatcaacaaaaaattgtgGCAAGAAATTATCAAAGGTCTTCATCTTCCTTCTTCTATTACTTCGGCAGCGTTCACACTAAGAACACAATACATGAAATACCTGTATCCGTACGAGTGCGAGAAGCGGCGCTTGAGCACGCCCGCCGAGCTGCAGGCAGCCATCGACGGCAACAGGCGCGAGGGCCGCCGCAGCAGCTACGGCCAGTACGACGCGATGCACGCGCAGCACCACCACCCGCACCACcagcagcagcaacagcagCGCAGCCCGACCAACCACCACTTGCAGATGTCGCTGGTggcgcagcagcagcagcagctggCCGCGCGCATGCTCGGCGGCGGCATGGGCGTGCAGGCGTTGCACAACGGCGGCGCGCACCATCCCAGCCATCCGCAGCCGCTGGGGCAGCCGATGAACGGGGGCCCGATGCCCGGCCTGGCCCCAAGCGAATTCGAGGCGCGCATGATGGAGTACGTCAAGCTGCTCAACAAGGAGATCCGCAGCAACGCCACCCCTCCGCGCGACGTCTCTCCCCCGCAGAACGCCGTCTCGCCCTTGGACCAGCTGGAGATGTCGCGCATGACGCTGTGGAACCTCTACAACAACAACCAGCCGCCGCCCGAGCCGCAGAAGGAGCCGATCAATCTGTCGGAGCCGGCCGGCGCCGGTGGATACCCGGCGTCGTGCCGGCTTCACGTGCCGGCGgccaacaacaacaacaatttgTCGGGGGGCGGGCAGATTAAAAGGGAGCCGGAGGCTAGGGAATCGCCGCCGCCTGCCAAGCGGGTGCCCAAGGAAGATGacgaggaggaggaagaggaggaggaggaggaggaggaggagcaGCGGCGCGCGGTCAAGTCGATGTCGCCTTCGACGAATATCAAGATCAATACCAGAGgTGATTCCCGCAACGGTGATAATTCCCTAGTGGTGAGCATGGAGCTCAACGGGATAACCTACCAAGGCGTTCTTTTCGCACAGAATGCTCCATCCAGCGGGAGGACAGCGATAGCCTCTTAA
- Protein Sequence
- MILLDSRDKYSPICTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDAMHAQHHHPHHQQQQQQRSPTNHHLQMSLVAQQQQQLAARMLGGGMGVQALHNGGAHHPSHPQPLGQPMNGGPMPGLAPSEFEARMMEYVKLLNKEIRSNATPPRDVSPPQNAVSPLDQLEMSRMTLWNLYNNNQPPPEPQKEPINLSEPAGAGGYPASCRLHVPAANNNNNLSGGGQIKREPEARESPPPAKRVPKEDDEEEEEEEEEEEEEQRRAVKSMSPSTNIKINTRGDSRNGDNSLVVSMELNGITYQGVLFAQNAPSSGRTAIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -