Gpol019411.1
Basic Information
- Insect
- Gastrophysa polygoni
- Gene Symbol
- jarid2b
- Assembly
- GCA_963576655.1
- Location
- OY755090.1:7041828-7058853[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2 1.4e+04 -2.9 0.1 25 64 330 369 319 385 0.72 2 2 6e-22 2e-18 67.1 0.0 6 89 1746 1827 1742 1827 0.93
Sequence Information
- Coding Sequence
- atgaagaaaaaaaggaaaaacagCTGCCCATCGCCTTTATTTGACGAGAGCCCGAAAAGAACTAAGGTGCATGCACAACGTAAGTTTGCACAAGGTTCAAACGTTAATAGCCCAGTCATAACTCCCATAAGAGAACTGGAATCTGAATCTTCTAGAAGTGATGTGTTACCAGAGCCAGTTGAACTACTCCCCATCAAAAGACCCAATACTGAAGACTTTCTAACCTTCCTGTGCTTCAGAGGTACACCTATACTTCCTCCAagcttgaatttcttcaatacagCATCCATAGTTGATACCAATGGTCAAGTACATGAAATTAAGAGTGAATCCTCTCAAAAGAATGGACCGATTGATATCACAAAGTGCGGAACTTCTTCAGACAAACCTTTCATTGCATTTGGGGTTAGAAAAAGAGCTGATCCAATAGTAATAAGTAGGCAGATGGATAGAAAAAGGCGACATGCTCTCGCAATACAAGCATTAAGGAGAAAATACCAAGAACAAAAAATGGCTAAAATCAGGGCAATCACTATCAGTAAACTATCTGAAAAAGTCACAAATAGAACACTAGTGAAGACAAACACTGTATCCAAGACAGAAACAGTGACtaaaaaaacaaattctttACAGAAAACCAAAGTTGTGGCCACCAAACATGTGAAAGTCACTACACAAACTCTCAAAACTACTATGAGACCCAAGATTAAAGATAACATGTGTTTGCGTAGTTTCAGAGGTCACATTGTACAAAAAGAACTTCCATTCATAAAAAATGGAGGAGTTAAGAATGTTGTCAGGAAAACTATTGATAAAAAGAGTAAGCCTAGAAAAACTAAAGAagtcatttctggaaaagaggaAGGACCTGCAAGAACAAGACAGcaaccaaattcaaaaaattcaaagagagAATCTACTATAGATGCTAGtCCTCGAGTTACAAGATCCACTAAAGTTGACAACAAAGCAGATATTAGAAGAAAACAGATTAAAAAACGTATACTTAGGCTCACAACAGTCAAGAAAACAGTAGTATCACAAAGAAAAAGCAGATCAATGAATGctaaaaaaatgctgaaaacaATACAGAAACGATCAAATACTGAAAATACTCCTGATAAAGTAGAAGATAAAGATGTGGCCCAGACTGTGGAAGGAAAAATGAATGCTAAAAAATCACAAATCCATCCTagaaaatgtacaaaaaaagtAGAGAAGAAGGATACTGTACAGGTTGATAAAAAAACCAACAACAAAACTTCTGATAGAAATAAAGAAGGTGAAAATACAGTTGCTATCAAAAAGGATTCCAATAAAGTTACAGATCATAAAACACAGTCaaaagaattattcaagaaacaaGTGAATAAAAAATTTGACATCAGAAAAGAAATCAGTAAATCTACTGACATGAAGAAGGATGCTAAACAAATAGTTGAAAAAAAGAAAAGCATCAGGATATCAAATAtcatccagaaaaaaaatgctaAGAATAcaaatgaagatgatgaaaGCAGTTTTGAGGAATCAAAGAGAAAAGCAAGAACATATGATGAGAAGGATAACAATAGAGATAAAACAGCAGAAAATCATGATGACATTAAgttacacaaaaaaaatgtaagatCAAAGAAAAGAAGATTGAGATCAGATGAggcagaaaaaaacaaatttactCTCAAAGCAACCAAAGAATCAGAAGAAATAGtcgaaaatatcaagaatacaGAGTCCGAGGATGAACAAGAATCttctttgaaaatcaaaaatattaaagaCAATCCTGAGGTAGCAGATAAAAGTAGTAAAACCAATACTGATATCAGTCTGATAACAGAAGATGAAGACACGGTCAATCAAGTTctcaaaaatattaaaaacaTAAAAGGTGGAGACATGCAGAGCACAAAGTCAGATGTTATagaaaataaattggaaatcaACATTGAAccagtttcagaaaaaaaaattgaaaaagaaataaacaTTGATATCATGGTAGTGGATTCAGAAGAAATAGCAGATTCAATAAGTAATTCTGATACTGATGATGACTCAAAAAACAAATCTGATTTCAAGTATGAACCAGCTGAAGATAAAACCtttaatgaaaaaattacagaaggaAGGGCTAAGCCAGCAtccacaaagttgaaaaattttaaagaaatgGTTGAAGCAATTCTGGAGTCAAATGATCCAGAAggatctaaaaaaaaaacaaaaaataaagctGAGGGAGAGAGAGCAAAAACTGGACATATTGAAGATTATCATAATTCCAGGATAACAGAAAAGGTAACAGATGATTGTGGGAAGTCTGAAAgttatcttgaaaatatattcaaagcgTCAAAGAAATCCCATGAACATGTAGAAGGCATAGAAATGAATCctgacttgaaaatattttcaacacaaGAAAAACTTATCATTCAATCAACATTAGAAAATGAACCTGACAAAATTGGTGATTTCAAGAAGAATGAATCAACTAATGATGATACTCAAAAGGAGCTTGAGATCCATGAAGCCAAAAATGAAAGTATAGTCAAAAAAAttactgaagaagaaaaacaggCATCACCTGATAGTCAACAAGGGAAACAAGATATTAATATCAAAGAAAAAGATGGTAATGAGATGAAAAATCTAACTAAAGTATCAAGCAGAAGGAAAGCTAGAACTAAGTCACTCAGAAAAGAATCAACTGAGGAAATTGAAGAGTTGAACAACATAACTGACAAAATGAGAAAGTTAGATACCAAAACTACAGAGCCAATAACTGTGACAAATGATGTCATCATCTgcaaaaaacaactgaaaagtTCCAGTGGAGAGGTCAAAATATCAGATCATAAAATTCAAaAGCAGGTTTCAGATAGTTCAGAAAAGATGCTTATTTCAACAAAGTTGAAGAAAGAGGTTCAAAATAAAGATGAAGTTGTTCCTAATAAGGAAAAATTTGCTGATAAGAAGATCTTGTCTGATAAAGATGACCAATCTGTGCCAAAAACATCACAGAGACCAAGCAGAAAAAGTAAAGAAGCTGCTGCCATCTACATGGAAATCTTGAGTCATAAATTAGTCCAAGAAAGCTGTATTGATGATGACAACATTTCCATTGATAGTTTCCCTGAGTTGCCAAATGTTAAAAAGACTGAACAAAGAGAAAATGAGCTGAAAAAAGCACAAGCTAAAACCACTAAAGATGAAAAACCTTGTGAAAAAACTGAAGTAGCTGGCATTAAAGAATCACCACTTGAAATGATGGATGATGAAGATATACCTGATGATATGAAACTGAATGATCTTAAACATAAACTACAAAGCACTATGATGAAACTTAAAGAATCTGTTGCGCCACAAAAGAAATCAACTAGCAAAACGAGAATTGAAGATCAAGAATTCTCagattctgatgaaattgacatcaaaACACTGATATCTAGAAtgtctgaagaaaaaattgaggaaactGTAAAAGGGTCCAAACGGGAAGAAAACAAAGTGCTGCCAAAACGGCAGTCAAGGAATATTCCACAAAACTACAGAAATGAAGACAGCTATGACACAGACGAATCTTTCTACATAGAAGTTAAAGTTCCAAGACAGAAAAAGTATACTAGGAGTAAAACTGccaataaatcaacaaaatctTCGATCAAAGATGAATCTCAGGACAAAAGCAACACCAGTATTAAGCCTGTTAGTTCTAAAGCAAAGTGGAGTTCAAGCGATGATGAATCTACCACTTCTGATATAAATCTCCAAGCTTTAGCCAATAAAGCAAAGAGCAAAAAGTTTTCtaaaacaaaatcaatcaaaaaaaccGACCAAGACTTCAGCGATTCAGATGAGGAACCTTTGTCAAAACTGACTGTCAAAAGTATAGAGGGTAGTCAGAAATCTGTGATCCCAATAGAAAAAAGTAAAGTAGTTAATGCAGTTAGACAATCTCCTAAGCCTCCAGACGAAAAACCTAGTAAACCAGAGGCAAAACCAAAAAGGGAGTGTGCTAAAATACCACAAAACTATCTCCCAATGTTTTCCAGTTCTGATGaagatgatatatttcatggttttgatgaaaaaacagaaaaaactAAACCTTTACTTAACTTTGACCCATCTTGCAGTCACACTCCCCCACTCTTAGATTTGTTGAACAAGGGTTTGAGCAGAAGGtttggaaaagaaaaagttAATATGTccaatgaacaaattgaaaagtgGTTGAAAGATTCAGCATTGGCAGGGAGAAGTATAAGAAAAGAAAACGATGATATGCTCAAATTTGGTGAAACAATTATTGACAAAGCctcaaaaacacaaaaacctACAACCAAGTTTGAAACTGCAGAGAGCATCTCTAAACAAACATCTCCAGAATCCGCTCTCGCCAAATCTGACAGCTCAAAGTTATGCTATGCGAGCAAGCCTCAGATTGATAGAAAACTGATTTTTAGGAAAGACAAAAAAGAAGCTACTCCTAAAATCAATGCCTTCTCTCCTGAAAACGAGAGTAGCGTTTATGCTTTTGGTGAAGAGAATGAAGATGTTATCAGCACACCATTTAGGAGACCTTCTAGAAGACCTTCTAGTACAGCTACTTCCAGGTCTGAGGATGAGTCTTCCAAATTTGATGATTCGTCAAAAATTGGTCAATTCAGGAAGCCTACCTTGAAGCAAGAAACCTCGAAAATCGGCAAAGAGGATTCGGATGCCATCATAGAAATAGAAGAAAACACCTTTTACATTCCCCAGCAACCAACCAAACACTGTCTCTCCAAATTCCAGAATAAACCACTGCTGAAAATCTCGAGAAGTAACGAGAAACTATCAGACTCGGACGATTTCAAGTATAAAATTCCTAGCTCACCTAGTGCCAGTTCATCTTCCAGCACTAAACTCTACAAACGGCAAAACAAGCAAAAACCCAAATTGGCAGATAACACGATTTCCCCCGTGTATGTCTCAGATTTCCCGAAGAAAAATGATCCTGCCTGCTTGGTGGAAGCGCCGACTTTTCATCCCACGGAACAGGAGTTCCAGGACCCTCTGGAGTACATCGAAAGGATTCGGCACAAGGCGGAGCAGTTCGGTATTTGTCGTATCGTTCCGCCTAGTACCTTCAAGCCTGAATGCAAGGTCACTGACGATATGAGATTCACGGCGTATAATCAGTACGTGCACAAAATGCTGCACAGGTGGGGGCCCAATTTTAAGGAGCTGATGGCCATCAAGAAGTATCTGGAAACGCAGAATATCAGCTTGGTTCATCCGCCATGGATTGGAGGCATGGAAATAGACTTGCCAAAGCTGTACCAAACCGTTCAGACTCTGGGAGGTCTCAAGGAAGTGAtcgagaagaaaaaatggcCGCGAGTATCTGAACTGATGAAGATACCCAAGTCCGCACAAGATCGGGTCACCAAACTAGATGACATATATTGCAAATATTTATTACCCTACGATACATTATCCATAGctGAGCGGGAGAAGTTGTTTGATGAAGTGGAAACAGAATGGGCGAAACGGGAATCtaaaaatctcatgaaattaCAGCAAAATTCGCCAAATCCGGAAAATACCGATAACGATTCCGATTTTGAAGATGACGCTGATGAATGCATCACCAAAGGCCGAAACATGGCCTTGAATGCTTTTTACAGAATAGCCAGGAATACCATGAGCATGTACTTCAAAACAAACGAGCCTTCTGCTCAAGAAGTTGAACAAGAGTATTGGAAATACGTAACGATGAGGCAGAATCATATTTGTGTGAATTCTGGTTCAATTGATTCTGGAAATTGGGGTTACGGATTTGCCGTAGCCAAAAACAGTCCCTTTGCAAGACATCCCTGGAATCTCAAAGTTCTCACCAATAATAGTGGGTCTCTCTTGAGGTCTCTTGCTCCACTTATGGCGGTGACAGTGCCCACCCTGCACGTCGGCATGGTGTTCAGTGCGTGCTGCTGGTACCGCGACCCGCACGGCTTGCCCTGGATCGAGTACCTCCACACGGGCGGCACCAAAATCTGGTACGCAGTGCCAGACTCCGCCTCTGAGGCGTTTCGCCTTGCCGTCCAACAGATGGCGCCGCGCCGCTGCGCCGCCAAGCCGCTGTGGCTGCCCTCGGACTCGGTGATGGCGCCGCCCGGGCAGCTGGTCGACCTGGGCGTACCGCTGTGCCGCGCGGCGCAGGAGCCCGGCCAGTTCGTGGTCGTCTTCCCGCAGGCGTTCACGTCGGCGCTGAGCACGGCGTACACAGTGTCGGAGAGCGTGTATTTCGCGCCGTCGCACTGGTTGAAGACGGCCGGCGGGCTGTTCGAGCGGCTGCGGGAGTCGCGCGAGCCGTCGATGTTCTCGCTGGACCGGCTGCTGATCAGCGTGGCGAACGATTCCAGGTGCACCGTGGAGATGCTGCGGCAAGTGATGCCCTACTTGCAGGATTTGTGCGACAGGGAGGCGGAGCGCAGAGGCAAATTGGCCGCTTTGGGGGAAATCCAGAGGGAGCAGTTGCCATTGCCCGAGGTGGGGAAGAGCAAAAAGAAGAAGACGCAGGCGGGAGACGAGGGAGACTACGAGTGCGACATTTGCAGGATGAGTTTGTTCGTTTCGATGATTTTTGATACTATTGAAGGAATCAACTACTGTCTAGACCACGGAATAGAAATGCTGGAAGCCAAAAAGTCTCAACTGCCGAACTGCAAATTCATGTTCACTTACGATGACGCCGAGTTGGCCGATCTACCGAACAAAGTTAGAGCCACGATAGAGAACAAAGGGCAAAAGAAAGTGCCCAGCAAGTACGCGGGCATGCCTACGCTGCTCACCAAGTGA
- Protein Sequence
- MKKKRKNSCPSPLFDESPKRTKVHAQRKFAQGSNVNSPVITPIRELESESSRSDVLPEPVELLPIKRPNTEDFLTFLCFRGTPILPPSLNFFNTASIVDTNGQVHEIKSESSQKNGPIDITKCGTSSDKPFIAFGVRKRADPIVISRQMDRKRRHALAIQALRRKYQEQKMAKIRAITISKLSEKVTNRTLVKTNTVSKTETVTKKTNSLQKTKVVATKHVKVTTQTLKTTMRPKIKDNMCLRSFRGHIVQKELPFIKNGGVKNVVRKTIDKKSKPRKTKEVISGKEEGPARTRQQPNSKNSKRESTIDASPRVTRSTKVDNKADIRRKQIKKRILRLTTVKKTVVSQRKSRSMNAKKMLKTIQKRSNTENTPDKVEDKDVAQTVEGKMNAKKSQIHPRKCTKKVEKKDTVQVDKKTNNKTSDRNKEGENTVAIKKDSNKVTDHKTQSKELFKKQVNKKFDIRKEISKSTDMKKDAKQIVEKKKSIRISNIIQKKNAKNTNEDDESSFEESKRKARTYDEKDNNRDKTAENHDDIKLHKKNVRSKKRRLRSDEAEKNKFTLKATKESEEIVENIKNTESEDEQESSLKIKNIKDNPEVADKSSKTNTDISLITEDEDTVNQVLKNIKNIKGGDMQSTKSDVIENKLEINIEPVSEKKIEKEINIDIMVVDSEEIADSISNSDTDDDSKNKSDFKYEPAEDKTFNEKITEGRAKPASTKLKNFKEMVEAILESNDPEGSKKKTKNKAEGERAKTGHIEDYHNSRITEKVTDDCGKSESYLENIFKASKKSHEHVEGIEMNPDLKIFSTQEKLIIQSTLENEPDKIGDFKKNESTNDDTQKELEIHEAKNESIVKKITEEEKQASPDSQQGKQDINIKEKDGNEMKNLTKVSSRRKARTKSLRKESTEEIEELNNITDKMRKLDTKTTEPITVTNDVIICKKQLKSSSGEVKISDHKIQKQVSDSSEKMLISTKLKKEVQNKDEVVPNKEKFADKKILSDKDDQSVPKTSQRPSRKSKEAAAIYMEILSHKLVQESCIDDDNISIDSFPELPNVKKTEQRENELKKAQAKTTKDEKPCEKTEVAGIKESPLEMMDDEDIPDDMKLNDLKHKLQSTMMKLKESVAPQKKSTSKTRIEDQEFSDSDEIDIKTLISRMSEEKIEETVKGSKREENKVLPKRQSRNIPQNYRNEDSYDTDESFYIEVKVPRQKKYTRSKTANKSTKSSIKDESQDKSNTSIKPVSSKAKWSSSDDESTTSDINLQALANKAKSKKFSKTKSIKKTDQDFSDSDEEPLSKLTVKSIEGSQKSVIPIEKSKVVNAVRQSPKPPDEKPSKPEAKPKRECAKIPQNYLPMFSSSDEDDIFHGFDEKTEKTKPLLNFDPSCSHTPPLLDLLNKGLSRRFGKEKVNMSNEQIEKWLKDSALAGRSIRKENDDMLKFGETIIDKASKTQKPTTKFETAESISKQTSPESALAKSDSSKLCYASKPQIDRKLIFRKDKKEATPKINAFSPENESSVYAFGEENEDVISTPFRRPSRRPSSTATSRSEDESSKFDDSSKIGQFRKPTLKQETSKIGKEDSDAIIEIEENTFYIPQQPTKHCLSKFQNKPLLKISRSNEKLSDSDDFKYKIPSSPSASSSSSTKLYKRQNKQKPKLADNTISPVYVSDFPKKNDPACLVEAPTFHPTEQEFQDPLEYIERIRHKAEQFGICRIVPPSTFKPECKVTDDMRFTAYNQYVHKMLHRWGPNFKELMAIKKYLETQNISLVHPPWIGGMEIDLPKLYQTVQTLGGLKEVIEKKKWPRVSELMKIPKSAQDRVTKLDDIYCKYLLPYDTLSIAEREKLFDEVETEWAKRESKNLMKLQQNSPNPENTDNDSDFEDDADECITKGRNMALNAFYRIARNTMSMYFKTNEPSAQEVEQEYWKYVTMRQNHICVNSGSIDSGNWGYGFAVAKNSPFARHPWNLKVLTNNSGSLLRSLAPLMAVTVPTLHVGMVFSACCWYRDPHGLPWIEYLHTGGTKIWYAVPDSASEAFRLAVQQMAPRRCAAKPLWLPSDSVMAPPGQLVDLGVPLCRAAQEPGQFVVVFPQAFTSALSTAYTVSESVYFAPSHWLKTAGGLFERLRESREPSMFSLDRLLISVANDSRCTVEMLRQVMPYLQDLCDREAERRGKLAALGEIQREQLPLPEVGKSKKKKTQAGDEGDYECDICRMSLFVSMIFDTIEGINYCLDHGIEMLEAKKSQLPNCKFMFTYDDAELADLPNKVRATIENKGQKKVPSKYAGMPTLLTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -