Gpul017845.1
Basic Information
- Insect
- Gastracanthus pulcherrimus
- Gene Symbol
- stc
- Assembly
- GCA_949152435.1
- Location
- OX424572.1:183423602-183434057[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.85 8.4e+04 -3.9 1.6 15 19 186 190 185 190 0.81 2 17 0.047 4.7e+03 0.1 0.3 4 10 219 225 218 226 0.94 3 17 1.3e-07 0.013 17.9 12.5 4 18 236 250 234 251 0.93 4 17 0.6 6e+04 -3.4 0.6 6 10 277 281 276 282 0.84 5 17 7.5e-07 0.075 15.5 13.9 1 18 287 304 287 305 0.94 6 17 0.24 2.4e+04 -2.2 0.8 6 10 333 337 332 337 0.90 7 17 2.3e-09 0.00023 23.5 14.5 1 18 343 360 343 361 0.98 8 17 0.22 2.1e+04 -2.0 0.9 5 10 390 395 390 395 0.95 9 17 3.5e-06 0.34 13.3 13.4 4 18 408 422 401 423 0.85 10 17 0.56 5.6e+04 -3.3 2.0 5 10 452 457 452 457 0.93 11 17 0.0055 5.5e+02 3.1 11.4 1 11 463 473 463 485 0.88 12 17 4e-11 4e-06 29.1 13.6 1 19 490 508 490 508 0.98 13 17 0.59 5.8e+04 -3.4 1.4 6 10 537 541 537 541 0.94 14 17 1 9.9e+04 -4.1 8.4 10 19 555 565 547 565 0.76 15 17 4.4e-06 0.44 13.0 7.8 1 12 601 612 601 618 0.87 16 17 0.82 8.2e+04 -3.8 1.4 6 10 624 628 623 628 0.80 17 17 5.9e-05 5.9 9.4 12.2 1 19 635 654 635 654 0.93
Sequence Information
- Coding Sequence
- atggcCACTTGGGATGGTTCCTATCCAGAACCAGATGGATCCAATTATTATGTTAACTCTAGTAGTAACCATGCACCTGCCAATATTTCAACATGGGACTACTATCTTCCAAATGCTAACAACACTTATGTGCAAAATACACCAGCTCCCTATGCTTTGGACACATCCATGGTCTTCGAACAGAGCACACCCAATTTCTACAATCATGTCGATAGAAATACCATTCCTCCTTTGATGCCAAATGCAGTCCCAAGCACCAATGCATATTCAAACAATGGAATACAGACTGCTGCTAATAAGAGAACAAATGATGTAGTGAACAAAAGTATTTTGCTTAAACGTCCTTACCACAAAAAATATGAACCAgatGATGATGCAGATCAAAGAGAAAGATTGACAGAGCAATTGAATCGTGGCCAACTAGAATGTTTAGTTTGTTGTGAATCTATTCGACAAGCTGATTATGTGTGGTCATGTAAAAATTGCTACCATGTCTTACACTTGAAGTGTGTGCAAAAATGGGCTATGTCTTCACAAGAcgAGAGCGGCTGGCGCTGTCCGGCCTGCCAGAACGTGACCCTGGACGTGCCCTCGGACTACGAGTGCTTCTGCGGCAAGAGCAAGGTGCCCGAGTGGAATCGCCGGGACATCGCGCACTCCTGCGGCGAGACGTGCGGCCGGACGCGCGCCGACACCAGCTGCGTCCACAAGTGCACGCTCCTCTGCCACCCGGGCTCGTGTCCCCCCTGTCTGGCCATGGTCACCAAGACCTGCGGCTGCGGCCGCATGTCCCAGACCCAGAAGTGCAGCGCGGGACCCCTGCTGCAGTGCGACGAGACTTGCGGTCGGGCGCTAAACTGCGCCGTGCACAAGTGCGAGGCCAAGTGCCATCACGGCAGCTGCGAGCCCTGCGACAAGATCGTCAAGCAAGaATGCTTTTGCGGAAAAAACACTCGTGAAGAAACCTGTATTTTGGACCTACCGCCAATGTATTCGTGTGAAAGTGTTTGTGACAAAGCGTTAGATTGCAGTAATCATAAGTGTAAAGAAATTTGCCACCCAGGTCAATGTGGACCTTGTGTCTTGAAACCCGAAACTGTTACACATTGCTGCTGTGAACAAACTCTTTTAACTATTAAGAGAGCAAGCTGCTTAGACCCAATTCCAACTTGTGATAAAGTGTGTTCCAAGCGATTGCGGTGTGGTCAGCCAAgCAATCCTCATACCTGCCAAGTAAACTGCCATGAAGGCAGTTGCCCTGAATGCGAGCTGATCACAAAAGTCAAATGCCGCTGCGGTTACATGGACAAAGAGATCCCTTGCAGAGAACTGACGACTAAGGCTGATGACGCTCGTTGCgagaaaaaatgtacaaaaaagcgTTCCTGTGGCAAGCACAAATGCAATCAGATGTGTTGCATCGATATTGAACACATTTGTCCACTTCCATGCTCAAAAAATTTGAGCTGCGGTAGACACAAGTGTGAACAGACTTGTCATCGAGGCAGATGCCAGCCCTGCTGGCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGCGCCTCGGTGATCTATCCGCCCGTGGCCTGCGGCACGCGCCGGCCCGTCTGCGAGAGGCCCTGCACCCGAGAGCACGGCTGCGGCCACGAGGTCCTGCACAACTGCCACAGCGATGCGGCCTGTCCGCCCTGCACCGTGCTCACCCAGAAGTGGTGCTACGGGGAGCACGAGCTGCGCAAGGCCGTGCCCTGCTACGTGAACGAGGTGTCCTGTGGACTGGCCTGCGGCAAGCCCCTCACCTGCGGCCGCCACAAGTGCATACAGATCTGCCACGCGGCCGGCTGCGAGAAGCCCGGACAGGTGCTGCAGTGCGCCCAACCCTGCACCCAGCCGAGAGAGCTGTGCAGCCACGTGTGCGGCGCGCCCTGTCACGCTGGGAAGTGCCCCGACATGCCCTGCAGGGAGATGGTCAAGGTCACCTGCCAATGCGGCCACAGGACGATGTCCCGCGTGTGCGCCGAGAACGCCCGCGACTATCAGAGAATCGCCAGTGGCATTCTGGCCAGCAAGATGGCGGACATGCAGCTCGGCCACTCGGTCGACCTGGAGGAGGTCTTCGGCCAGGGCGCCAAGCGGCAGAACCAGCTCAAGACCCTTGAGTGCAACGAGGACTGCAAGATGATCGAGAGAAACCGAAGGCTGACGCTCGGTCTGCAGATCATCAATCCCGACCTCAGCGGCAAACTCTTGCCCAAGTACAGCGAGCACATGAAGCAGTGGGGCAAGAAGGACCCGGCCTTCTGCCAGCTCGTCCACGACAGGCTCAGCGAGCTCGTCCAGCTCGCCAAGATCTCGAAGCAGAAGTCGCGTAGCTACTCGTTTGAGAGCATGAACCGGGACAAGAGGCAGTTCGTCCACGAGTCGTGCGAGCACTTTGGCTGCGAGAGCCAGGCTTACGACCAGGAGCCCAAGCGCAACGTCGTCGCCACGGCCGTCAAGGACAAGTGTTGGTTACCGAGTTACAGCCTGATGGAACTATTGCAAAGAGAGAACGGTCAACGAAAAGTACCAGGACCAATGCTGAACAAGTCAAAACTGAACAGCACCGATAGGAATGATAGAAGCATGGATGTTTTGCAATTAAACTCAAAGAAGAGTCTAAAACCTCTGCCTACGACTTCGGCTTCACCTTCAAGATCTCCAGAACCGGAGATAGATTACTTTAATTACAAAGGTTGA
- Protein Sequence
- MATWDGSYPEPDGSNYYVNSSSNHAPANISTWDYYLPNANNTYVQNTPAPYALDTSMVFEQSTPNFYNHVDRNTIPPLMPNAVPSTNAYSNNGIQTAANKRTNDVVNKSILLKRPYHKKYEPDDDADQRERLTEQLNRGQLECLVCCESIRQADYVWSCKNCYHVLHLKCVQKWAMSSQDESGWRCPACQNVTLDVPSDYECFCGKSKVPEWNRRDIAHSCGETCGRTRADTSCVHKCTLLCHPGSCPPCLAMVTKTCGCGRMSQTQKCSAGPLLQCDETCGRALNCAVHKCEAKCHHGSCEPCDKIVKQECFCGKNTREETCILDLPPMYSCESVCDKALDCSNHKCKEICHPGQCGPCVLKPETVTHCCCEQTLLTIKRASCLDPIPTCDKVCSKRLRCGQPSNPHTCQVNCHEGSCPECELITKVKCRCGYMDKEIPCRELTTKADDARCEKKCTKKRSCGKHKCNQMCCIDIEHICPLPCSKNLSCGRHKCEQTCHRGRCQPCWRSSFEELYCECGASVIYPPVACGTRRPVCERPCTREHGCGHEVLHNCHSDAACPPCTVLTQKWCYGEHELRKAVPCYVNEVSCGLACGKPLTCGRHKCIQICHAAGCEKPGQVLQCAQPCTQPRELCSHVCGAPCHAGKCPDMPCREMVKVTCQCGHRTMSRVCAENARDYQRIASGILASKMADMQLGHSVDLEEVFGQGAKRQNQLKTLECNEDCKMIERNRRLTLGLQIINPDLSGKLLPKYSEHMKQWGKKDPAFCQLVHDRLSELVQLAKISKQKSRSYSFESMNRDKRQFVHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLMELLQRENGQRKVPGPMLNKSKLNSTDRNDRSMDVLQLNSKKSLKPLPTTSASPSRSPEPEIDYFNYKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -