Gpul093615.1
Basic Information
- Insect
- Gastracanthus pulcherrimus
- Gene Symbol
- Zfy2
- Assembly
- GCA_949152435.1
- Location
- OX424576.1:171129547-171162847[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 3.7 1.1e+03 2.8 2.3 2 20 12 30 11 32 0.86 2 21 0.0036 1 12.3 3.4 2 23 40 61 39 61 0.97 3 21 0.1 30 7.7 2.5 1 21 91 111 91 112 0.93 4 21 0.026 7.6 9.6 3.2 2 23 120 142 119 142 0.95 5 21 1.7 5e+02 3.8 0.8 2 14 174 186 173 188 0.90 6 21 4.3 1.3e+03 2.6 0.9 2 21 202 221 201 222 0.92 7 21 0.041 12 8.9 4.5 1 23 230 253 230 253 0.95 8 21 0.061 18 8.4 1.3 2 21 263 282 263 283 0.91 9 21 0.0047 1.4 11.9 8.7 2 23 291 312 290 312 0.97 10 21 0.028 8.2 9.5 0.1 2 21 358 377 357 378 0.94 11 21 0.12 34 7.5 3.6 2 23 386 408 385 408 0.95 12 21 0.0018 0.52 13.2 1.7 2 22 523 543 522 543 0.94 13 21 0.036 11 9.1 1.0 2 23 552 574 551 574 0.93 14 21 3.1e-05 0.0092 18.7 2.6 2 23 609 630 608 630 0.97 15 21 0.057 17 8.5 2.3 2 21 735 754 734 755 0.95 16 21 0.00046 0.14 15.0 2.3 2 23 763 785 762 785 0.94 17 21 1.5 4.5e+02 4.0 0.7 2 21 845 864 844 865 0.94 18 21 0.0048 1.4 11.9 1.4 2 21 906 925 906 926 0.93 19 21 4.1 1.2e+03 2.6 1.1 2 23 934 955 933 955 0.91 20 21 0.34 1e+02 6.0 0.3 2 21 981 1000 980 1001 0.94 21 21 0.014 4.1 10.4 1.5 2 21 1009 1028 1008 1029 0.93
Sequence Information
- Coding Sequence
- ATGCACATGACTATGGCTCCAGAACGTTACAGTAAGTGCGGCAAGTGCTACAAAGGTTTCAAGGTTCGATACGACTGTCGAAGCCACGAGAAGATATGCGGCAAAGAGTCGGATCTGCAGTGCGAATTTTGTccttataaaagtaaattgaaatCACATTTCGAGACACACATGCAGACTCATATACCGCTAAACGAAGTTGCAACAGCTGATGCAGATTATGCAGATACAAAAAGAGATAATACCAAAATAAAACGTATAGCTGGacaatataaatgtacaaagtGCGGTTCTAATTACAAGACCAAGTATCGCCAGCAGAGGCACGAAAAACTCTGTGGCTTATCACCGTTTTTGACGTGCAAGTTTTGCAACTTCAAGACAAGGTACATAAGTAATCTGAAGCAACACTTGCTGAAGAAGCACAAGGGCTTGAAGACAGGAGAGATCCAAAAGATTATTGACACAGCAAAGATAGAAGAAGAAAAGATATTTGGCTCGATAAATCACATCATACTGTATTGCTCGAATTGCGACGTGAACTTCAAATCGAAGAGTACAACTGACCGGAAGTGTCCCCGTTGCCGCGAACGGGCAGTCCTGCAGTGCCTAAAGTGTGACGCGCGTTACGACAAGCTCCGCGGTATGTACAAACACCTGAAGCACAAATGCCTCATCAAGAAGTACTTCCATTGCGCGGACTGTGACTATCGGTGCACTTCCAAGATTTACTTGCGTCTTCACGTGGAGAGAAAGCACACGACCGTGGCACCGAAGGATTATGAGAAGTGCGCAAAGTGCGGCAAAGGCTTCAAGCACCTAACGTACCGTCGGATGCACGAGAGACTGTGCGGTGAAGATCCACACCTGCAGTGCAAATATTGCCACTACAGAAGTAAGAGGAAACAGCATTTCGACAAACACATGCGGATGCATGTACTGCAAAACGAAGTTGCAACGGCTGATGCAGGTCGTGCGGATGCAAAAACATGCAGTGAAGAAAACGACGTTGTTAGATTTACTAAAGCAGGTACCATCCGCAACGACGTTGAATTGGATAAGAAAGGTTTGGAATGTACCAAATGCGGTAATAAGTACAGAATCATAAGTTCTCTGCAGGAGCACCAGAGAATATGTGGCTTAGCGCCATTTTTGAAATGCGAGTTTTGCGACTACCAAACAAGTTATATTCGTAGTTTGAAGAGACACTTGCAACATAAACACAAGAACTTGAAGATCGGACAGATCCTGCAGATTATTGGTGGAGCGAAGGCGAAAGAACATGAGATGATTGGTAGAGCGGAGGCGAAAGAACATGAGATTATTGGTAGAGCGAAGGCTAAAGAACATGAGATGATTGGTAAAACGAAGGCGAAAGAACATGAGATGATTGATAGAGTGAAGATGAAAGAACATGAAATGATTGGTAGAGCGAAGGTGAAAGAACATGAGATGATTGGTTTCAGAAAATTCGTCAAAATGTACTGCTCAAATTGTGAAATTAACTTCGAAAAGTACCTCTCAAAAAACCAGAAGTGCCCCAATTGCCGCGATCTAATAGTTTTACAATGTCTAAAGTGCGACAGATGTTACACGAGCCCGAGCAGTATGTACACTCACTTAAGGAGCAAATGTGGGCCCAAAGAGTACTTACAGTGTGCAGACTGTCACTACTATAGCTTTACCAAGGCAGATTTGCGGCTTCACATAGAGAGAATGCACAAAACTATAGCATCGCAAGACAACGATAAGAGCGAGCAAGGCTTCAAGCGCCGACTCAAACGTCAAATACCCGAGAGGATGTGTAACAAAAAGTCAGATCTGGAGTGCGAATATTGCCCTTATAAAGGTAAAAGGAAACACGATCTCAAGAGACACATGCAGACGCACATACTGCAGCCGGAAAATGAGGATGCAACGAACAATGCAGACTACGTAGACGGAAAAACTAGCGATGGCGTTGAAGTTCCAGCCGGCTTGCCAAGGTTCCCAGGTGCAGAAGTGCAAGCTTGGACACAGCGAGAGGTGCTCCATTGTCCTAATGAAGCTACGACTTTACCGATCACCCCGGACTCCTTCTCCGGTGGCACAGGAGAAACCCACCCACCGTCCGTCGCAATTGCTCAAGgaAATCACGAAGAGAGCGATAATCAATTACCACCTGAAGATAATATCAAGAGAAAATACAAAACTGAACAAAATAAGTGTCCCAAGTGCGGTTGTTGGTTCAAGGGCAGGTACAATTTTCGGCAACATCAGAACCTATGTGGCTTGTCACCATTTTTGAACTGCCAGTTTTGCGACTACAAGTCAAGGCGGAGCAGTAATCTAAAAAAACACTTAATAAGCAAGCATAATAACTTGAACGCAGGAGATATCCAGAAGAATGTTGTTACAGCAAAGACGAAAGAACATCAGATGTTTGGTTTGAAGGAGTTCGCCAAATTGTACTGCTTAAAGTGCAACGTGtactttacaaagaaaaatttcgtaaacCTTAAGTGTCCCCATTGCTGCGAATTGGCAGTCTTACAATGCCTAAAGTGCAATGGATATTATGTAAGCAAGGGCAGTATGCACAATCACTTGAGAAACAAATGTCAGCCCCAGAACTACTTTCAGTGTGCACACTGTGACTATCGAAGCTTTGTGAAACTCAGTTTGGTCTGTCACATAAAGAGAAGGCACATGACTGTGGCACCAGAAGATTACGAGAAATGCGACAAGTGCGGCAAAGCATTTAAGTACCGATGGTACCGACAGAAGCACGAGAAACGTTGCGGCAAAAAGCCAAATCTACAGTGCGAATATTGTCCCTTTAGAAGCTTGTATAAACAGTCTTTCAAAGAGCACGTGCAAAATCACATAAACCATCTAAAAAATGTGGATGCAGTGGTTGATGCAGATTCTATAGTTAGAACAATTAAAGatgctTTTATCAAGTGCACCAAGTGCGATGGTTGGTTCAAAAGCGGACGCTCTCTGCAGAATCACCAGCGAATATGTGGCTTGGCGCCGTTTTTAAGGTGCAAGTTTTGCGACTACAAGACAAACTACACGGATAATCTAAGAAAGCACTTAAGCCGTAAGTGCCTCCAGTGCTGCGAGCTAGTAGTCTTAGAATGCCTGGAGTGCGACAGACGTTCCGTGAAATACGCCCGTATGGAATCTAACTTGAGACGCAAATGTCAGACCCAGAAAAGTACTTTGAGTAGGTGTGCAGATTTCGACTATACACGGAAAGAAAAGATCCGCCACGTTGGCTAG
- Protein Sequence
- MHMTMAPERYSKCGKCYKGFKVRYDCRSHEKICGKESDLQCEFCPYKSKLKSHFETHMQTHIPLNEVATADADYADTKRDNTKIKRIAGQYKCTKCGSNYKTKYRQQRHEKLCGLSPFLTCKFCNFKTRYISNLKQHLLKKHKGLKTGEIQKIIDTAKIEEEKIFGSINHIILYCSNCDVNFKSKSTTDRKCPRCRERAVLQCLKCDARYDKLRGMYKHLKHKCLIKKYFHCADCDYRCTSKIYLRLHVERKHTTVAPKDYEKCAKCGKGFKHLTYRRMHERLCGEDPHLQCKYCHYRSKRKQHFDKHMRMHVLQNEVATADAGRADAKTCSEENDVVRFTKAGTIRNDVELDKKGLECTKCGNKYRIISSLQEHQRICGLAPFLKCEFCDYQTSYIRSLKRHLQHKHKNLKIGQILQIIGGAKAKEHEMIGRAEAKEHEIIGRAKAKEHEMIGKTKAKEHEMIDRVKMKEHEMIGRAKVKEHEMIGFRKFVKMYCSNCEINFEKYLSKNQKCPNCRDLIVLQCLKCDRCYTSPSSMYTHLRSKCGPKEYLQCADCHYYSFTKADLRLHIERMHKTIASQDNDKSEQGFKRRLKRQIPERMCNKKSDLECEYCPYKGKRKHDLKRHMQTHILQPENEDATNNADYVDGKTSDGVEVPAGLPRFPGAEVQAWTQREVLHCPNEATTLPITPDSFSGGTGETHPPSVAIAQGNHEESDNQLPPEDNIKRKYKTEQNKCPKCGCWFKGRYNFRQHQNLCGLSPFLNCQFCDYKSRRSSNLKKHLISKHNNLNAGDIQKNVVTAKTKEHQMFGLKEFAKLYCLKCNVYFTKKNFVNLKCPHCCELAVLQCLKCNGYYVSKGSMHNHLRNKCQPQNYFQCAHCDYRSFVKLSLVCHIKRRHMTVAPEDYEKCDKCGKAFKYRWYRQKHEKRCGKKPNLQCEYCPFRSLYKQSFKEHVQNHINHLKNVDAVVDADSIVRTIKDAFIKCTKCDGWFKSGRSLQNHQRICGLAPFLRCKFCDYKTNYTDNLRKHLSRKCLQCCELVVLECLECDRRSVKYARMESNLRRKCQTQKSTLSRCADFDYTRKEKIRHVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -