Gpul093374.1
Basic Information
- Insect
- Gastracanthus pulcherrimus
- Gene Symbol
- -
- Assembly
- GCA_949152435.1
- Location
- OX424576.1:167669921-167720964[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0058 1.7 11.6 2.4 1 23 74 97 74 97 0.95 2 20 0.13 38 7.3 0.4 2 22 109 129 108 129 0.95 3 20 0.0091 2.7 11.0 0.7 2 23 137 159 136 159 0.95 4 20 0.0091 2.7 11.0 0.5 2 20 235 253 234 255 0.93 5 20 0.0053 1.6 11.7 0.9 2 21 296 315 295 316 0.93 6 20 0.013 3.9 10.5 1.4 2 23 324 345 323 345 0.97 7 20 2.3 6.9e+02 3.4 1.7 2 23 442 464 441 464 0.93 8 20 9.4 2.8e+03 1.5 0.0 2 20 475 493 474 495 0.90 9 20 6.8 2e+03 1.9 6.2 2 23 503 525 502 525 0.94 10 20 9.3 2.7e+03 1.5 1.3 2 22 601 621 600 621 0.94 11 20 0.0023 0.68 12.9 0.3 1 23 629 652 629 652 0.96 12 20 0.13 39 7.3 1.2 2 15 662 675 661 678 0.88 13 20 0.13 39 7.3 0.5 2 23 690 711 689 711 0.96 14 20 0.0011 0.32 13.9 0.9 1 23 773 796 773 796 0.96 15 20 0.014 4.1 10.4 0.3 2 20 806 824 805 826 0.93 16 20 1.1e-05 0.0032 20.2 3.8 1 23 833 855 833 856 0.96 17 20 0.26 75 6.4 0.2 1 21 870 890 870 891 0.89 18 20 0.81 2.4e+02 4.8 1.7 3 23 903 924 901 924 0.92 19 20 0.015 4.3 10.3 6.9 1 23 1315 1338 1315 1338 0.95 20 20 0.45 1.3e+02 5.6 0.1 2 22 1349 1369 1348 1369 0.94
Sequence Information
- Coding Sequence
- ATGGCGTGGCAGGCGGACACCCTGAGCACCGCCACGATCCTGATCTGCGCGATCTGCGACACGAGCAAGCGATCCGTGGCGACTCGCTCGAAGACCCTGTGCCCGAAGTGCGCCCGGCGCATGAAGTACCTCTGCCTGCGATGCCCCGCGAATCCCCCGATCGACAATCCCAGCGGGGTCTACTACCACCTGAAGCACCAGTGCGGCCAGCCAGAGTTCTACCGTTGCGAGCACTGCGGCTACCGCAGCAGGATCAAGAGGTACATGACTCGTCACATGCTCGCCGAGCACGTTGGGACCGGTGCGGCCGAGAGCGGACTCGTCGAGTGCAACAAGTGCGGGGGCAAGTACCGGGGCAGGCAGAACATGCTGACGCACAGGAGGACCTGCGGCTTGGAGCCATTCATGGAGTGCGGACTCTGCGAGTACAACACCAGGTTCAGGATGAACCTCAAGAGGCACATGGAGATGATGCACAAGCACCTGAGCCCAGAGGACATGCAGAAGATCCTTGATAAGGCGAAGGGGAAGAAACGTAATGCACTGAAGTCTACTAATAAAAAACCAGAAGTAACTAGGACGTCAAAGGCACTCAGCCGCAAAGAATTTGTCAAACTGTACTGCTCGAAGTGCAACTTGAACTTCGAGAAATTCACTTGGAACGACCGGAAGTGTCGCAGCTGCGGCACGGCGACACTCTTGCAATGTCGCAATTGCGACAGGCGCTACGTGAACAGCGACAGTATGAAGAATCACTTGACGAGCAGATGCGGACTCAATGAGTACTTCCACTGTGCTCACTGCGCCTACCAAAGCCTCTGGAAGAAAAATCTGCTCCTTCACATACAGATAAAGCACACGACCGTGGCGCCGAAGGATTTCGTCAAGTGCGTAAAGTGCGGCAAAGGATTCAAGCATTGGTTCAACAAGCGCATCCACGAGAGGCTGTGCGGCAAGGAGCCCGACTTGCAGTGCGAATTTTGCCCGTACAGAGGAAAGAGCAAAGGTTATTTCAAGAAACACGTGCAGAGACACATACAGAATCAGAAGCATAGCGATCCGAAGGTTGATACAGGAAGTACCGTCGATGAAACTGCTGATGATGATGTTGGAACTGTAGACCTTCTCGGCAGCACGACCGTCCTCGTCTGCAGGACCTGCAACTCCATGAAGGAATCCGTGTCCAATCCGTCGAAGGCCCAGTGCCAGAAGTGCCGCGAGCCAATGGAGTACCGGTGCCTGAAGTGCGCCGCTCTCCACACCACCTCCATAGCCACGGTCTACTTCCACCTGAAGCGCCAGTGCGGCCAGAAGGAATTCCAGCGTTGCCAACAATGCGACTACCGCACCATGATCAGGGACAAGCTGCATCGCCACGTGCTGCTCGAGCACACCCTCAAGTCCGACGAGGAGGGATTCGTCGAGTGCGCCAAGTGCGGCGGCGCCTACAAGGGCCGCAAGCAAATCCTGCAGCACTTAAGCATCTGCAGCTTGGAGAGGTTCTTGAGGTGCAAATTCTGCAAATTCACCACGAAGTACTGCTTGAGTTTTAGGAGACACTTGAAGGGGATGCACAAGCGGGATCCGGAAGAGATACGGAAGATCATCGACGAAGCGAGGACGGAGAAATgTACAAGTGCATCCGAAACAACAAATAATGAACCAGAAGTAGATCCAAAGCCAAAGACATTGAACAGCAAAGAATACGTCAAACTGTACTGCTCAAAATGCGACATGAACTTTGAAAAGAACACCAGAAATGCCCGGAAATGTCACCTCTGCGGCACGGCGGCACACTTGCAATGCTTGAAGTGCGCCAGGCGCTATTTGGACCCCAACTGCATGAACAGACACTTGAGAACCAAATGCGGACCGATAGAGTACTTTCAGTGCGACAACTGCGACTATAACGTTACTACGAAGGAGCGTTTGCGCTTGCACATAGAGGTGATGCACACGACAGTGGCGCCGGAAGATTATCTCAAGTGCCGAAAGTGCGGCAAAGGATTCAAGCACCGGTTCAACCAAAAGGCCTACGAGAAACAGTGCGGCAGAGAGCCCTATCTGCAGTGCGAATTCTGTCCCTTGCGAAGCAAAACCCTAGCGTACTTCAAGATACACGTGCAGAATCACATGCTGCATCCGGAGAATGGGAATGAGACGGTTGGTGCAGGTTCTAAAGATGGAATTGCTGGCGATGCCATGGGAATTACAGGAATACAGGAACTGGTAAATGCACATTGCCCAAAATGCAAGAGAAAGACGAAAGCCATCGACGGCGTGAGGAAGTGCACCAAGTGCTCCACCAAATACACTTTCCACTGCGGCGAATGCGGCAAAAAGTATCCCGTGCAGAGCACGGTTCGGCAACACATCATCAGCAAACACCTCGGCAGCGAGCTGAAGAAGCGCCAGCAGTGTCCGAAGTGCGGCACCAGGTTCGTCCTCAAGTACAGACTGTCCACGCACCTGGAGTACTGCGGCAGGGAGCCGAGTTTCCAGTGCGACAACTGCCCCCGCAAGTTCAAGTACAAGAGCAGCCTCGTCGACCACATGCAGAAGCACCATTCCAAGCTCACGAAAAGCGAGATTCTCGCTCTGAAGATCCACATTTGTCAAGGGTGCGGCAAAAAGTACCAGGCCAAACGGGGACTGGACTGGCACAGGCAAATCTTTTGCGGAAAGAAGAGGAGTCCCACGATCGCGTGCGCCCATTGCAGTTTCAAGTCGTACACGAAGCAGCAGCTGATGGCCCATCTGCACGAGGCGCATCTACGCCTGTTCACCGTGGAGGCACTGAAGTGCAAACTGCGTCCCTTCTCCACCTCCTTTTACAAATTGTCTTACAACCCAGTTCCCGTGCCGGTCGCTCACCCCTACACTCCGGCCTACCTGAAGCACTGCCTGAGCAACCTCGCCGCGCGTCTCTACTCCCAGAAGGTGACGTTCAACGCCCTGGAGGACTCGCTGTCGAGCGGCGGCTGGGCCTCGGCTGGAGCCTCGGACTCGGTGATCGCGGCCAGCGAGCGGCTGTTCCGGTGCATCTCCTGCGCGGAGTCGCTGCGCGGCAAAGCTGACGACGGGGGCTCGCGGAACGCCATCTGCAGGGCGATGGACAGTCTCTACCAGGGGCTCAAGTCTATCAAGGCGGGGATCGCCGGGGTCGAGGACTCGAGAGTCGCCGGCCTAGTCGACGAGCTCGACGGCATCAGCGAGTACGCCAACTGCCACGTGAGGGACGTGGTGCTGACGTTGGACGAGAGGCCGAGCGCCGGTGTCGAGGATGATGAAGTCATCTTCGACTTAAGCCTTGACAGGGTCGCGATTGTTAAGTCAGAGCAAATTGAAAAGACGCTCATTGAAAAGCCTGCAGCTGAACAAGTACCAGTTAATACACTGTACAATTTGCCAGAGCAAATTGAAAAGGCGACAGATGAAAAGCCTGCAGCTAAAAAAGTACCAGTTAATACACTCTctgTCCCGATTTGGTCCAAATCCGCTTACATAAATAAATGGAGGGTTGCCAGCTGTAGTGCATTGCTCGATTTGTCCAATGAATCTGACAGCGGAGTCGACATTTCAGGACCCAGTGGAGCGGGTACCAGTAGCTTTCAAACACCGCGCTTACTTCTTCAACGGGCTGCAGTGAAAAACCGCGACCATTCATTGACCATCAGCTCGAGATCAGCGGACGATTTTGCGACTCGAACGCTTAGTAGCGATAGAGTTATGAAGACATCTGGCTTGCTCAAGACCAGCACCATTCTCGTGTGCGAGAACTGCAACGCGACTAAGAAACCTGAGCACAGTCTCACGCCGACGAAATGCCAGAACTGCAACGGGCAAATGCGCTATTGCTGCCTGAATTGCAATAACCTCCTAACCTCCAGCAGGGTAACTACCTACAATCACATTCGCTTCAGATGCGGACAACCGGTCGTCTACCACTGCGAGGACTGCGACTACTGCAGCAAGTCCAAGTACCACCTACGCGGTCACATACTGAACAAGCACAACGTCGAACAGGACGAGAACGGACTGATCGAGTGCGCCACTTGCAGCGTCAGGTTAAAGGGCTGGCGCAATCTGTTGCAACACCAGAGGCGCTGTGGCTTGTCGCCATTTTTGAAGTGCGACTTTTGCAACTACAAGACTAAGTGCAGATTTAGTCTCAAGAGTCACTTGAAGTTCAGGCATACGAATTTGACGGCAGAAGAGGTACGGAAGATTATTACTGGAGCGCACGAGATAGAACACCAGTTAAAGGCTCCTGCGCTCGACGCCAACTGCAACAACTTCACTCCGAGACATCTCGAGCGCTGCGTCGGTAAACTCGTCGCCAGGCTCTACTCGCTCAAGGCCAGGCTCAACGACCTGGAGCACTCGCTGCTGAGCGAACGCTCTCAGGCCGTGGACTCCGTGATCATCGCCAGCATGTGGCTGTTCAGCTGTGTCTCTTGCGTGGAGTCGCTGCGCGACAAAAAGGAGACCGACAGCAGCGAGGTGCACCGCGCGATGGACAGTCTCCTGGAGATGCTGTCGGCCGTCAAGAAAGTACTGTCGTGCCTGGCGTACTCGAGAGTAGCCGACGTTATGGTCGAGCTGGACGGCATCGTCGCGTTCGCCAGGTGCGACGTGAGACGGCCGGCGTTGAAGCTGGACGCGAGACGAGCGGAGAGAGCCACGAATGATACGCCGCTCAGGATCGCAGGTATTACAGGGGACGTCGAGGTCGGGTGGGGATTACCGACTTGA
- Protein Sequence
- MAWQADTLSTATILICAICDTSKRSVATRSKTLCPKCARRMKYLCLRCPANPPIDNPSGVYYHLKHQCGQPEFYRCEHCGYRSRIKRYMTRHMLAEHVGTGAAESGLVECNKCGGKYRGRQNMLTHRRTCGLEPFMECGLCEYNTRFRMNLKRHMEMMHKHLSPEDMQKILDKAKGKKRNALKSTNKKPEVTRTSKALSRKEFVKLYCSKCNLNFEKFTWNDRKCRSCGTATLLQCRNCDRRYVNSDSMKNHLTSRCGLNEYFHCAHCAYQSLWKKNLLLHIQIKHTTVAPKDFVKCVKCGKGFKHWFNKRIHERLCGKEPDLQCEFCPYRGKSKGYFKKHVQRHIQNQKHSDPKVDTGSTVDETADDDVGTVDLLGSTTVLVCRTCNSMKESVSNPSKAQCQKCREPMEYRCLKCAALHTTSIATVYFHLKRQCGQKEFQRCQQCDYRTMIRDKLHRHVLLEHTLKSDEEGFVECAKCGGAYKGRKQILQHLSICSLERFLRCKFCKFTTKYCLSFRRHLKGMHKRDPEEIRKIIDEARTEKCTSASETTNNEPEVDPKPKTLNSKEYVKLYCSKCDMNFEKNTRNARKCHLCGTAAHLQCLKCARRYLDPNCMNRHLRTKCGPIEYFQCDNCDYNVTTKERLRLHIEVMHTTVAPEDYLKCRKCGKGFKHRFNQKAYEKQCGREPYLQCEFCPLRSKTLAYFKIHVQNHMLHPENGNETVGAGSKDGIAGDAMGITGIQELVNAHCPKCKRKTKAIDGVRKCTKCSTKYTFHCGECGKKYPVQSTVRQHIISKHLGSELKKRQQCPKCGTRFVLKYRLSTHLEYCGREPSFQCDNCPRKFKYKSSLVDHMQKHHSKLTKSEILALKIHICQGCGKKYQAKRGLDWHRQIFCGKKRSPTIACAHCSFKSYTKQQLMAHLHEAHLRLFTVEALKCKLRPFSTSFYKLSYNPVPVPVAHPYTPAYLKHCLSNLAARLYSQKVTFNALEDSLSSGGWASAGASDSVIAASERLFRCISCAESLRGKADDGGSRNAICRAMDSLYQGLKSIKAGIAGVEDSRVAGLVDELDGISEYANCHVRDVVLTLDERPSAGVEDDEVIFDLSLDRVAIVKSEQIEKTLIEKPAAEQVPVNTLYNLPEQIEKATDEKPAAKKVPVNTLSVPIWSKSAYINKWRVASCSALLDLSNESDSGVDISGPSGAGTSSFQTPRLLLQRAAVKNRDHSLTISSRSADDFATRTLSSDRVMKTSGLLKTSTILVCENCNATKKPEHSLTPTKCQNCNGQMRYCCLNCNNLLTSSRVTTYNHIRFRCGQPVVYHCEDCDYCSKSKYHLRGHILNKHNVEQDENGLIECATCSVRLKGWRNLLQHQRRCGLSPFLKCDFCNYKTKCRFSLKSHLKFRHTNLTAEEVRKIITGAHEIEHQLKAPALDANCNNFTPRHLERCVGKLVARLYSLKARLNDLEHSLLSERSQAVDSVIIASMWLFSCVSCVESLRDKKETDSSEVHRAMDSLLEMLSAVKKVLSCLAYSRVADVMVELDGIVAFARCDVRRPALKLDARRAERATNDTPLRIAGITGDVEVGWGLPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -