Gpul093970.1
Basic Information
- Insect
- Gastracanthus pulcherrimus
- Gene Symbol
- Zfy2
- Assembly
- GCA_949152435.1
- Location
- OX424576.1:175686562-175711865[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.02 6 9.9 1.7 1 23 97 120 97 120 0.95 2 21 0.094 28 7.8 0.2 3 21 132 150 131 151 0.94 3 21 0.0033 0.99 12.3 3.1 2 23 159 181 158 181 0.96 4 21 7.3 2.1e+03 1.8 0.2 2 12 234 244 233 246 0.83 5 21 0.03 8.8 9.4 1.5 1 20 261 280 261 282 0.93 6 21 0.19 57 6.8 1.9 1 23 290 313 290 313 0.96 7 21 0.003 0.87 12.5 1.6 2 21 323 342 322 343 0.93 8 21 0.04 12 9.0 1.4 2 23 351 372 350 372 0.97 9 21 0.00025 0.073 15.9 0.3 1 23 433 456 433 456 0.96 10 21 0.0022 0.65 12.9 0.2 2 21 468 487 468 488 0.94 11 21 0.00096 0.28 14.1 0.4 2 23 496 518 495 518 0.96 12 21 0.0015 0.45 13.4 3.6 1 21 530 550 530 551 0.95 13 21 4.5 1.3e+03 2.5 2.8 3 23 561 582 559 582 0.87 14 21 0.013 3.8 10.5 0.8 2 22 629 649 628 649 0.94 15 21 0.055 16 8.5 1.3 1 23 658 681 658 681 0.98 16 21 0.029 8.6 9.4 1.2 3 21 693 711 692 712 0.93 17 21 0.056 16 8.5 3.8 2 23 720 742 719 742 0.96 18 21 1.1 3.2e+02 4.4 0.3 2 13 774 785 773 788 0.86 19 21 0.079 23 8.0 5.3 2 21 802 821 801 822 0.95 20 21 0.35 1e+02 6.0 2.4 1 23 831 854 831 854 0.95 21 21 3.7e-05 0.011 18.5 0.2 3 21 863 881 862 882 0.94
Sequence Information
- Coding Sequence
- ATGCCAGTCTTCATGGAGGAATGtcgaaatgtgctactcttcctGGCCAACGCCGAGAACGTGCTgatcttcgtaagggccatcgatatgaTTAGCATACTATCGTCTGTCATCCTCATCTGCAAGACCTGTGAAATAACGATAACATCCGTAAGAAGATGTATGAATACCCAGTGCCAGAATTGTCGCAAGCAAATGCAGTACCAGTGCCTTAAATGCAACTATTTGCGAACCTTATGCATGACCACGGTTTACCGCCACTTAAGATTTGTGTGCGGTCAGAACTTCTACTATTGCGAGCACTGCAGCTACCGCAGCAGGGTCAAGAGCGTGTTAAGTCGTCATATACTGGCCAATCACACAATTGAATTCAACGAAAATGGATTGGCAGCGTGTGCCAAATGTGGCGACAAATTCACGAGCAGGCGCGGACTGCTGAATCACCAAAATCTGTGCGGCTTGGAACCGTTTTTGAAGTGCACCTTTTGCGGCCTTAAGACTAAGTACAAACGTTATCTGAATGAACACTTGAGAAGGAAGCACAGGCATTTGAAGACAGAAGACATCCAGAAAATGCTTTCCATAGCAAAGAAGAAAACACTTAAGTTGATCGATATGAATGCATTCAAGCCGAGTAATAACGAAAGAGGAGTAGATGCGACGTCAAAGAAATTCGGATACAAAGATTTTGTCAAAGTTTACTGCCCAGAGTGCGACGTAAACTTCGAAAAAAACAATCGGAACGACCGAAAGTGTCACCAGTGCGGCCAGATTGTACACTTCCAATGCCTCAAGTGCGACAGACGCTTCGTGACCAGCCGACGCATGCATAGTCACTTGAGTCTAAAGTGTAGACCCAATGAGTACTTTCAGTGCACGTACTGTAACCACCGAACCCTTCTAAAGGGCAATTTGGTTGCTCACGTAAAGAGAATGCACACAACCGTGGCGCCGGAAGATTACGTGAAGTGCAGAAAGTGCGGCAAAGAATTCAGGCATCGATCCGACCGGCAGATGCACGAAAGGCTGTGCGGCAAAGAGCCCGATATGCAGTGTGAATTTTGCCCCTATAGAACTAAATATAGAGACTATTTCAAGTTACACGTGCAGAATCACATGCTGCACCCAAAGAATGGTGAAGCAACGGTTAATGCAGCTTCGATCGATCAAACTGGCGATAGTCTTGGAATTCTAGGACTGCAGAAGCTGATGAAAGCCTGCTGTTCGAAGTGCAAGAGAAGGACGAAAGTCTTCTTCGGCAGGACAAAGTGTAGCAAATGCACCACCGAATTCAGCTACCGTTGCGGCGAATGCGACGTAGTGTATACTGTGCAAGGCGAGCTTCTTAAGCATATCCAGCACAATCATTTTGATTTTGCCAACGAACCGAAGAAGCGTCCGCAGTGTCCTGAATGTGACAAGAGGTTTGTCCTCTACGAAGATCTGTATCAACATCGAAAGCTCTGCGACAAAGCGGTGAATCTGCAGTGCGACCAGTGTCCATATGTAACCAAGATGAGGTGGAATCTTCTAAGACATTTGCGATTGTATCATCCCGAACTAACCAATGCTGTCGACCCAAAACAGTACGCTTGCCACGAGTGCAGCAAGGTGTACAAAGATCCCAACAGTCTGCACCACCACAAGCGGTTCTACTGTGGCAAGGAGCCGAAGCTCGCGTGCGACCATTGCAACTTTAAGTCGTTTACAAAGCCAGTGCTGGCCACTCATCTTCACAAGATGCATGTGCAAGTGTTCATCGAGAAAGCACTGGAGTGTTCCAAAGGTTTGACCCAACTCTACTGCTCAAAGTGTGACGTGAACTTCGAGAAACTTGATTTTAATAACCGGAAGTGTCATCAGTGCGGCAATGTAGCACACTTGCAATGTTTGAAATGCGACAAACGCTACATGAACTACTCCAGCATGTTGTCCCATTTGAGAAGAAAATGTGGGTCCGATAATGAATACTTTCAATGTGTGGACTGCGACTACCGCAACACGAACAAGGACAGAATACGACGTCATATATTGACCAAGCACACcattaaatttgacaaaaatcaaTTGGCGGCGTGTGCCAAATGTGGCGACAGATTCTCGAGCAAGCACGCATTGCTGAAACACCATAATATGTGCGGCTTGGCGCCGTTTTTGGAGTGCCCGTTTTGCGATTTCAAGACTAAATACAATTGCTATCTGCAGGACCATTTGAAGAGAAAACACAAGGATTTGAAAGCCGAGGAAATTCCGAAAGCTCTCGCTACAGCGAAGAAAAAAACACTTCAGTCTATCGGTTCAAAAGGTTTGGTCAAACTCTACTGTCCAAAGTGCgacataaatttcaaaaagaacAATTGGAACGACCGAGAGTGTCGCCAGTGCGGCAGTAAAGCGCACTTGCAGTGTTTGAAGTGCGAGAAACACTACAAGAACCACTCCAGTATGTTTCATCACTTAAGATACAAGTGTGCGCCCAATAAAGAGTCCTTCAAATGCGCGGACTGTCACTACCAAACCTATGCAAAAAATTCGCTGCTCAATCACACAGAAAGGATGCACAAACAGCGAGATTACAATAAGAACTGCGGTGAGTGCGGTAAAGGATTCAGGTACCCATCGAGTCTACGGAAACATGAGAGGCTTTGTCGCAAGAAGAAACCCAACGTGAAGCGTCAATTTGGCCCCAATAGAACTAAGCACGGAGACTCTTTCAAGAATCACTTGCAAGATCGCGTGTTACATCCGGAGAATGGCAACCTAACGGTTAATACAGGTTATACCGATCAAATTGGCGATAGCGTTGAATTTTCAGCTATCCTCTCCATGAGGGTGGTGACGTTGAGGGTGCAGAAGAGAAGAAGGGGTATGAGTGTCTCCACCCCTGGTTCTTCTTGGCGAATGGGACTACGTTTTCGCGAGCATTTCCCCACGTCGCTGCCCAATGAGCGAAAAGCTGCAGGGCCCGTACTGGCGTGGGAGAGAGTTAGAGTGTAA
- Protein Sequence
- MPVFMEECRNVLLFLANAENVLIFVRAIDMISILSSVILICKTCEITITSVRRCMNTQCQNCRKQMQYQCLKCNYLRTLCMTTVYRHLRFVCGQNFYYCEHCSYRSRVKSVLSRHILANHTIEFNENGLAACAKCGDKFTSRRGLLNHQNLCGLEPFLKCTFCGLKTKYKRYLNEHLRRKHRHLKTEDIQKMLSIAKKKTLKLIDMNAFKPSNNERGVDATSKKFGYKDFVKVYCPECDVNFEKNNRNDRKCHQCGQIVHFQCLKCDRRFVTSRRMHSHLSLKCRPNEYFQCTYCNHRTLLKGNLVAHVKRMHTTVAPEDYVKCRKCGKEFRHRSDRQMHERLCGKEPDMQCEFCPYRTKYRDYFKLHVQNHMLHPKNGEATVNAASIDQTGDSLGILGLQKLMKACCSKCKRRTKVFFGRTKCSKCTTEFSYRCGECDVVYTVQGELLKHIQHNHFDFANEPKKRPQCPECDKRFVLYEDLYQHRKLCDKAVNLQCDQCPYVTKMRWNLLRHLRLYHPELTNAVDPKQYACHECSKVYKDPNSLHHHKRFYCGKEPKLACDHCNFKSFTKPVLATHLHKMHVQVFIEKALECSKGLTQLYCSKCDVNFEKLDFNNRKCHQCGNVAHLQCLKCDKRYMNYSSMLSHLRRKCGSDNEYFQCVDCDYRNTNKDRIRRHILTKHTIKFDKNQLAACAKCGDRFSSKHALLKHHNMCGLAPFLECPFCDFKTKYNCYLQDHLKRKHKDLKAEEIPKALATAKKKTLQSIGSKGLVKLYCPKCDINFKKNNWNDRECRQCGSKAHLQCLKCEKHYKNHSSMFHHLRYKCAPNKESFKCADCHYQTYAKNSLLNHTERMHKQRDYNKNCGECGKGFRYPSSLRKHERLCRKKKPNVKRQFGPNRTKHGDSFKNHLQDRVLHPENGNLTVNTGYTDQIGDSVEFSAILSMRVVTLRVQKRRRGMSVSTPGSSWRMGLRFREHFPTSLPNERKAAGPVLAWERVRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -