Gpul041893.1
Basic Information
- Insect
- Gastracanthus pulcherrimus
- Gene Symbol
- ZFX
- Assembly
- GCA_949152435.1
- Location
- OX424574.1:28797164-28807722[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3 8.8e+02 3.1 0.1 3 23 28 48 27 48 0.94 2 15 1.7 5e+02 3.8 2.8 1 19 1142 1160 1142 1165 0.75 3 15 0.095 28 7.8 2.0 2 23 1280 1302 1279 1302 0.96 4 15 0.0042 1.2 12.0 0.3 2 23 1315 1336 1315 1336 0.98 5 15 3.2e-05 0.0095 18.7 2.3 2 23 1339 1360 1338 1360 0.97 6 15 0.038 11 9.0 0.4 1 23 1366 1388 1366 1388 0.95 7 15 4.5e-05 0.013 18.2 4.5 2 23 1395 1416 1394 1417 0.95 8 15 0.2 59 6.8 3.7 5 23 1430 1448 1429 1448 0.97 9 15 4e-05 0.012 18.4 1.5 3 23 1455 1476 1454 1476 0.97 10 15 0.018 5.4 10.0 0.3 2 23 1492 1512 1491 1512 0.97 11 15 0.00012 0.036 16.9 0.7 1 20 1518 1537 1518 1540 0.92 12 15 0.00015 0.045 16.6 2.7 1 23 1548 1570 1548 1570 0.99 13 15 0.0042 1.2 12.0 3.2 1 23 1576 1598 1576 1598 0.97 14 15 4.3e-06 0.0013 21.4 3.9 1 23 1604 1626 1604 1626 0.99 15 15 0.00055 0.16 14.8 7.2 1 23 1632 1654 1632 1655 0.96
Sequence Information
- Coding Sequence
- ATGGATCTCAGCTCAGCTGTGAGTGCGATGTCAGCCAGCGGCAGTCCCAGTCCCAGCGGTGCTGGCGGTGGGGCAGTGGCCTGTCCTGTCTGCACCCTGTACCTGCGCGAGGGCATCAGCCTGCAGAAACACTTGGACACCCATCCGAAGGAGCAGGTGATCGAGGCGCTGATCAGGGCGAGCAGCGGCGGCGGAGGTGCCGGCGCCTCCGCCGCCCTGCTCAGCCAGCAGCTGACCACCCAGCCGGCCACGCCGACACCCATCACGCCCACGCCTACGCCTGTGCCGAGCCTGCCCATGCCCGCGCCCAGTCCTGGACCGAGtgtacagcagcagcagcaacagccggCGGCCTCGCCGTCACCACATGTTCCTCACGCCCAGTCGCCCTATCCGATTGGGCCCATTTTCGAGTGCCCGCCGATCAACGCCATGATACCGCCACCGCAGTTCGCCTCCTTCAGCTACCAGCAGTTTGTTAATAATGGTACCATGATGATACCCGCGCAGTACGCAATGGCCCAGGCGCAGGCACCCCCCACGAGTCAGATGATGCAGATGCTGTACAGTCCCTACGGCATGTACCACCAGCAGCAGATCCCCACGGTGCAGATGATCtcggcgccgccgccgccgcctcctcAGCCGCCGATGATGCCTAcctcgacgacgacgatgcCGACGACGGTGCCGGCCATAACGACGCGCATGAGGCCCACGACGAGCACGAGCAACGTCACGACCCTCACGGCCGTGAACGAGACGACGccgtcgacgacgacgatgacgacgacgatgacgacgccGACGAGATCCGCTACCTGTgcacagcaacagcaacagcagcagcaacagtcgATGATCGTCGAGCAGCCGAAACAACAGCAGCAGGGGGAGCAGGAGCAGCATCAGATTATACAGGACTTGATACCTGGACCAGATCGCATACTGCCCGATCTGGAGATGCCTCCGTCGCCCGAGCCGGCGCACGCGGACGCGCTCCCGGAGGAGATGCAGCAGCCGCAGGCTTGTCTCGAGCACAGAGAGCAGCAGACGCAGAACGTGTGCGTGCaggaggagcagcagcagcgacacgTAGTTCATCAATATCAGAGaGAGGATCCACCAACGTTGATCAGTAATCCCTGCGACGATAGTACTGACGACGACAAGACTGAAAGGATTCTACCAGATATTGAGGACAACGAGGAAATCGAATCGCTGATAGTGCGAACGCCGGACAGGAGAGATACTCACAATGACACCGAAATGCAGGTATCAGAAGCGGTCGAACACATGGAGGTCGCGATTCACGAAGAAATCGCGGAAAAGGAGACCGTGGAAGGCATTCAGTGCACCGAAGTAATAGACAGCTGTAGAGAATTCAAGGACAAATCCGACGACGAGCATCAGCAGcatcagcaacagcagcaacaaatCGTGCACGAGACCGTGGAACCTCAAGACCTGACCGTCGACGAGGCGCGAACGTCCACCGTCAGCAAACCCGAGATCGAGCAGCTGAGTCGACTACTCGTCAACATGGAAACCGAGTTCAGCAGCGTAGAATTAAGCAGCAAAATAGTCGTCTCCGAGGAATTCGTCAGCAGTAAACCACAGGAGGAAGAACTCCAAGATGTCCTGTCGGTCGAGCCTCTCGAAAAGCAGTCGCATCatccacaacaacaacaacaacaacaacaacaagaacaacaagaacaacaacaacacaCCGAGGAGGACGAGAGCACGAGCGTATCCTACCACAAGATCAGTCCCGAGCCGATCGAGTGCAAGATCATCCACGCGCACGAGGACACAGACGTCTCCTCCGTCGCCTCCTCCACGGACTCGATACAGTGCGACCTCGAGATCCAGAAGATCATCACCGCGGCCTATCACTACAAGTGCTCCCAGTCGGCGCCCTCCTCGCCTACCAACGGCAGCGTCGCCAAAAAGCAGCAGCACTACTATCGCTCCCTGTCGCGGGCCTCCCAGCGCTCGGACTTCGAGCGCTCGAACGAGAACATCAGCTGTCCGTACCCGGTGGGCTTCGAGGCGACGTCCCTGCAGGACTACCTCAAGACCAACTACAACGACGAGGACATGGAGCTGGAGGAGCCCCTGCATCATCACGCGTACATGAAGCAGAACAGCGGTGGCATCATAGCGGAGCGCCCGAGCTCGCACACGCCACTGTCGACGAGCATGAGCGGTGTGTCGGTGTTGAAGGCGCGTCGGGGTAAGATATCGAATTCTCCCGTGTCGGTGCGATCCGCCTCGTCCTACGGCCAcatggaggaggaggaggaggaggaagaagaggaggatgaggaagacgaggacgaggaggacTCGGAAGCCGAGCGCTGCGGTAGCTGTCCGTCCAACGAcaaggacgaggacgaggaggacgaggacgaggaggacAGGTTACTGCTGGACCAGCAGAACATCGAGCACGTGGAGATAAAGGAGAACTTCCGCGAGGACAGCAAGGCCGCGATAGCCGTCGAGATCATGCtgcagcatcaacagcagcagcaacaacaacaacaacaacaacaacaacaacaacagcaacaacagcaacaacagcaggaGCAAGCCGCGGATTTCCGATCCCAGAGCTTTATGGCCGATCATTACCCGGCCGGTCAGTTTCCCCTCGATAATCATCACTCCTCCCACGCTCAGcatcagcagcatcagcagcagcccGTCGTCGTGACGATGCACCACGAGACCTACCCCCTGTCCTCGAACGAGATCTCTCAGAATCCGTTTGAGAACATCGTCGAGTGCGTCGAGCCGAtgaccaccaccaccagcagcagcaccaaCGACTCCAAGAGCTACTCGAGCTCGACGAGCaagtcgacgacgacgacgacgacgacgacgacgacgacgacgaaccTGCAGCTGCAGAAGCAGCAGCCCCAGACCGAGCTGCTGAATATCAGCGAGGACGCGCACGCCGGGCCGATCAACGTCTTCGAGATGGAGGAGCCGCCGATCTACGTGCCGAGCTCGTTCATCAGCGAGTCCTCGCAGAAGGCGGTCAGCGGCACGAGTCATCAGTCCATGTCGAATAGTAGTGAGAACGGCGCGGGCAACGACGAGGAGGTCAAGAGTGTCAATATGAGGGCGGACGAGACGATGCCACCGAGGGGCGAGCTGTCCGAGCAGGAGAGCAATGGCTGTACCGAACAGTCGGCCTGGCAGCTCTACATGGGCCAAGATTCGTCTCGCATGTCGACGTCGTACGACCTGATGGCGCGCGAGAGCTGGGAGGAATCCGAGGGCTCGGACCACGAGGACAACAACGGCGGTCCCCTCCTGGACAGTCGCTCTCTGGCCACTCACTTCACGGCCAGTCTTTTCCCCGACCGCGACCGCAAGACTCCCACCCGTCGCATGTTCAAGTGCACGCACTGTCCCGAGGTGTTCGACTGTCCCAAAGAGCGCCGCGTCCACAGCACGATGGTGCACAAGGAGGCGGGTCCCTCTGCCGGCTACAGCAACGACTGCAACCTGTCCAACAATCATCAGTCCGAGCTCAAGGACATGAAGCTGCTGGAGGGCCGGGCCAACGTCTTCGAGGACATGTTCATGCCGGGCAGCCTGCAGCAGGCCTACCTCCAGCACCACCAGCAGCAACCACCGCTGCTCCACCAGCTCCAGCCTCCCCAGGCTccccaacagcagcagcagcaacagcagcagcagcagcactcgAGCTCGGCCAAAGCCGCCGCGGCCACGAGCGTCACGAGCGAGGTCGATCCCAAGCTCGTGCTCGACGCCCAGCACCTGTCCGCCGCGAGCGAGGTCACCTGCGGCCTCTGCAGCCAGCGCTTCGGCAGCGACAAGTCCCTGCAGATGCACCACCGGCGCATGCACGCCGTCGAGACCGTGAAGCGCGTCCGCGAGAACGCCAAGTGCCAGATCTGCAGCGAGGAGTTCACCTCCGTCGCCAGCTTCAATCTCCACCTGAAGGTCCATCCGCTGGAGTGCGGCCAGTGCGGCAAGTACTTCTACCGCAAGCAGAACTTCAAGCTCCACATGAAGCGCCACCTCGGCATCAAGCCCTTCCCCTGCACCCTCTGCGACAAGGCCTTCCTCACCAAGCAGAAGCTCGACGAGCACACGAACGGCCACACGGGCAACGCCCCCGTCAAGTGCAACCTCTGCAACGAGACCTTCAGGCGCTACTCCAACCTCACCCAGCACAAGAATCGCCACCACCTCAACATCAAGAAGAAGCTCAAGGACTACATATGCCACTGCGGCGAGGTCTTCCACACGAAGAAGAAGCTCGCCTGGCACAAGGAGACCCACGACGAGAAGCCCAAGGCCTGCACCTACTGCAACGAGCGCTTCATCCACATGGCCAGTCTGACGCGGCACATGCGCCGGGCCCACAATCGGCGCTTCGTCCCCGACGCCCAGCGCGAGAGCGAGAACGTCGAGTGCCCGATCTGCAAGTGCATCTACCTGCGCTCCTCCCTGGCGGTGCACATGCGCGTCCACAACGGCGAGCGACCCTACGAGTGTCAGGTCTGCTCCAAGGCCTTCAGCACCAAGTGGAATCTCCAGCTGCACAAGTGGACCCACGCGGCGCGCAGCACCAAGCCCTTCAAGTGCAATCAGTGCAGCGCCGCCTTCTACAGGCACAGCGACTACACCGCCCACATGAACTCCCACAGGAACGTCCGGCCCTACACCTGCAACTACTGCGGCGCCCAGTTCATCAGGAAGTACAATTGCCTGCGCCACGTGAAGGAGCACGAGGAGAACAAGGCTTACACCTGCGACATCTGCAACAAGACCTTCCACAGGTCCTACTATCTCAAGGAGCATCTACGCGTGCACTCGGGCGCCCGGCCCTACACCTGTCACATATGCGGCAAGTCCAGCAGCACAAAGTCCAATCATAATAAGCACGTCAGGATTCATCACGCGCGCGAGCCTGTAAATACGGAGAATTAA
- Protein Sequence
- MDLSSAVSAMSASGSPSPSGAGGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSGGGGAGASAALLSQQLTTQPATPTPITPTPTPVPSLPMPAPSPGPSVQQQQQQPAASPSPHVPHAQSPYPIGPIFECPPINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQAPPTSQMMQMLYSPYGMYHQQQIPTVQMISAPPPPPPQPPMMPTSTTTMPTTVPAITTRMRPTTSTSNVTTLTAVNETTPSTTTMTTTMTTPTRSATCAQQQQQQQQQSMIVEQPKQQQQGEQEQHQIIQDLIPGPDRILPDLEMPPSPEPAHADALPEEMQQPQACLEHREQQTQNVCVQEEQQQRHVVHQYQREDPPTLISNPCDDSTDDDKTERILPDIEDNEEIESLIVRTPDRRDTHNDTEMQVSEAVEHMEVAIHEEIAEKETVEGIQCTEVIDSCREFKDKSDDEHQQHQQQQQQIVHETVEPQDLTVDEARTSTVSKPEIEQLSRLLVNMETEFSSVELSSKIVVSEEFVSSKPQEEELQDVLSVEPLEKQSHHPQQQQQQQQQEQQEQQQHTEEDESTSVSYHKISPEPIECKIIHAHEDTDVSSVASSTDSIQCDLEIQKIITAAYHYKCSQSAPSSPTNGSVAKKQQHYYRSLSRASQRSDFERSNENISCPYPVGFEATSLQDYLKTNYNDEDMELEEPLHHHAYMKQNSGGIIAERPSSHTPLSTSMSGVSVLKARRGKISNSPVSVRSASSYGHMEEEEEEEEEEDEEDEDEEDSEAERCGSCPSNDKDEDEEDEDEEDRLLLDQQNIEHVEIKENFREDSKAAIAVEIMLQHQQQQQQQQQQQQQQQQQQQQQQQEQAADFRSQSFMADHYPAGQFPLDNHHSSHAQHQQHQQQPVVVTMHHETYPLSSNEISQNPFENIVECVEPMTTTTSSSTNDSKSYSSSTSKSTTTTTTTTTTTTNLQLQKQQPQTELLNISEDAHAGPINVFEMEEPPIYVPSSFISESSQKAVSGTSHQSMSNSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEQSAWQLYMGQDSSRMSTSYDLMARESWEESEGSDHEDNNGGPLLDSRSLATHFTASLFPDRDRKTPTRRMFKCTHCPEVFDCPKERRVHSTMVHKEAGPSAGYSNDCNLSNNHQSELKDMKLLEGRANVFEDMFMPGSLQQAYLQHHQQQPPLLHQLQPPQAPQQQQQQQQQQQHSSSAKAAAATSVTSEVDPKLVLDAQHLSAASEVTCGLCSQRFGSDKSLQMHHRRMHAVETVKRVRENAKCQICSEEFTSVASFNLHLKVHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTLCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDICNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -