Basic Information

Insect: Gastracanthus pulcherrimus
Gene Symbol: -
Assembly: GCA_949152435.1
Location: OX424574.1:167620511-167628836[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.55 1.6e+02 5.4 5.8 1 23 400 422 400 422 0.97

2 19 0.00058 0.17 14.8 0.6 1 23 471 493 471 493 0.98

3 19 0.038 11 9.0 0.4 1 20 549 568 549 570 0.94

4 19 0.021 6.2 9.8 2.2 2 23 611 632 610 632 0.97

5 19 0.00017 0.049 16.4 0.1 1 23 684 706 684 706 0.97

6 19 0.0022 0.64 12.9 0.1 1 23 712 734 712 734 0.98

7 19 6.3e-05 0.019 17.8 4.7 1 23 777 800 777 800 0.95

8 19 0.00041 0.12 15.2 0.4 2 23 808 830 807 830 0.95

9 19 0.0004 0.12 15.3 1.1 2 19 859 876 858 881 0.89

10 19 2.8e-05 0.0081 18.9 0.5 1 23 917 939 917 939 0.94

11 19 0.16 48 7.0 0.0 2 20 1017 1035 1016 1035 0.95

12 19 0.00048 0.14 15.0 0.1 2 23 1054 1075 1053 1075 0.97

13 19 0.0004 0.12 15.3 2.9 1 23 1103 1125 1103 1125 0.97

14 19 0.023 6.7 9.7 5.2 1 21 1145 1165 1145 1169 0.89

15 19 0.15 43 7.2 0.2 2 23 1227 1249 1226 1249 0.93

16 19 0.011 3.3 10.7 2.6 3 23 1281 1302 1279 1302 0.89

17 19 0.00072 0.21 14.4 0.1 1 23 1309 1333 1309 1333 0.93

18 19 0.011 3.2 10.8 3.4 1 23 1338 1361 1338 1361 0.97

19 19 0.02 5.8 9.9 0.4 3 23 1393 1414 1391 1414 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.55	1.6e+02	5.4	5.8	1	23	400	422	400	422	0.97
2	19	0.00058	0.17	14.8	0.6	1	23	471	493	471	493	0.98
3	19	0.038	11	9.0	0.4	1	20	549	568	549	570	0.94
4	19	0.021	6.2	9.8	2.2	2	23	611	632	610	632	0.97
5	19	0.00017	0.049	16.4	0.1	1	23	684	706	684	706	0.97
6	19	0.0022	0.64	12.9	0.1	1	23	712	734	712	734	0.98
7	19	6.3e-05	0.019	17.8	4.7	1	23	777	800	777	800	0.95
8	19	0.00041	0.12	15.2	0.4	2	23	808	830	807	830	0.95
9	19	0.0004	0.12	15.3	1.1	2	19	859	876	858	881	0.89
10	19	2.8e-05	0.0081	18.9	0.5	1	23	917	939	917	939	0.94
11	19	0.16	48	7.0	0.0	2	20	1017	1035	1016	1035	0.95
12	19	0.00048	0.14	15.0	0.1	2	23	1054	1075	1053	1075	0.97
13	19	0.0004	0.12	15.3	2.9	1	23	1103	1125	1103	1125	0.97
14	19	0.023	6.7	9.7	5.2	1	21	1145	1165	1145	1169	0.89
15	19	0.15	43	7.2	0.2	2	23	1227	1249	1226	1249	0.93
16	19	0.011	3.3	10.7	2.6	3	23	1281	1302	1279	1302	0.89
17	19	0.00072	0.21	14.4	0.1	1	23	1309	1333	1309	1333	0.93
18	19	0.011	3.2	10.8	3.4	1	23	1338	1361	1338	1361	0.97
19	19	0.02	5.8	9.9	0.4	3	23	1393	1414	1391	1414	0.95

Sequence Information

Coding Sequence: ATGGAGGAGGAGCCGACCGCGGCAGAGGCCGCGCCAGAGGTTGCACCAGCGGCTGCACCAGCGGCTGTGCCAGCGGCCGCGGCATCGCCGGTCCAGGACGTGGTGGAGGTGAACGGCATCGGCCAAGGCGCCTGCAAacccgacgacgacgacggcttGGACGAGGCCTGCCGACTCTGCCTGAGCACCGACCCGACGCGCTCCTCGATCTTCGGCGTGCCGCCGACCAAGGAAGCCGTGCCCTTCGCCGAGAAGATACGCTCCTGTCTGGCGATTCAGGTTTCTTCCAACGATAAGTTGTCAACGCTAGTATGTACAAATTGTATCAAGAATATAAACCAATGGCACTCATACAAGGATACATGTTTGCGTTCGCAAGAAAAACTTCAGCAATGGCTAGCATCAAAACAAAATACAGCTACCTTACCAATGGTAACTGTAAAAGAAGAACCAGTGGACGTAGAATTCCCAGATGACACTGCACAAAATGTAACAAATGAATCTAATActaCTAACCATGTTGCACCAATTGCAAACAGTATGGATGTTGATACTGAACAAAATGCTACACCAGCCATAAATACGGTGGTGGCTCAAGTGCCAGAACCAGAGCAACCACCAAAAGTGAATGAAAGAATAGAAAAAGACTTGCCTCCATTGGTACGCATCAAAAGTGAGCCTGTAGATACAGAAGACGAGGATGATTGTAATGTAGATGTTGAATCAGTCAATAGCGGAGAACTTTTGATCAATCCAATGGCAGTGGCGGTAGCTAACACTGTCAATAGCGACAGAATAATGGAAGCAGATTCTACACAAAAATTCGGTCCAAAGAGATTTGGACCAAAGAAGAAATTTCGTCGTGGACCTCACACGCACTACAGGGGCACCCGACTATTCAAGAAAAAGTGCattcattgtaaaattttcttgcACTCAAAGTATTCCTACACGCAGCATATGTCTAGATACCATGGAATTGTCAATAGTTTATCAGGAACGAACGAAGTCGTCAAGCCTCCACCTCAACCTCCGGTGAACAAGCAGAAATCAAAACTCTCCCATCATCCAGATAACGCGGAACCAATTGTAGATACTCAAAATTGCATTAGTCCCGAAGACGCAGAATtcgaaaaaatgataaagaccGATCCTCTAACACCTGTGCAGAAGAACATCATCGGCCAGCTGAAGACCTTCTCCTGCTACTCGTGCAAGCAAACCTTCTTCGACAGAAGACACACTCTGAACCACATCAGGCAGCACATGCCCGATCTACGATCGTACACCTGCATAGCCTGTCTAACCGAGTTCTCCGACAGGTCCATGTACAAACTCCACTGCGGCGCATCCTTCGAGTGCGCCATGAAGATAGCCCTGGTAGTGCCCAAAGTAGGCCACGAAAAGTACTTCACCTGCAACATGTGTCTTCGACCGTTCAACAACCGAAGGGAGCTCCTCACCCACTTGGCCATGCACGCCGACAAGCAATACAAGCAACTAGCTCAACCACTGCGATCTCCACCAAAACTCAAGCCCATAACTCCAGCCCCAGCGGTGACTCCCCTAGCGGACAACTCTCCCTCCAAGCGTTCCATCTCCAATCTCACCGGTCCCTACATGAACGGCGACCCGGCCCACAATCACATGTGCGACCTCTGCGGCATGATCTACAGGTACAAGCCCAACATGTTCAAGCATCGCGACCTCTGCTCCACCCTGCCCGACAACATTCGCACCTCCTATCGCTGCGTCCACTGCAGCATGACCTATCTCGTCTACAAGAAGTTCTACACCCACGTGTTCAACGATCACAAGAAGCGCGAGATCACCTGCTTCACGTGCCACGCGCGATTCCCGACCTCGGACGAGTACCTAGCCCACCACGAGACGCACCGCGTCCTCGCCGACAAGGACACCGACAAGGTCAACGAGTCCCTCGCGAACGAGCAGCCGCACCCCGAGGAGGAGACCGAGTTCCCCATGTCGGTGGATCCGCTGGACGCCTCCTCGGAGCACAATCAGATGGACCAGGGCGACAACAAGACCTTCAACTGCGCCCTGTGCGGCGAGAGCTTCGCCACGAAGATCGAGCTCACCGAGCACAGGAATCTCCATCTCAAGGTGAAGATCTACTCGTGCGTCATCTGTCGCAGTATGTTCAGCAGCTCGGGGGCCCTGGAGGGACACATGAAGGAGCACGGCATCGAGGACGCGGGCGAGCAAAACGCCAACAGCTCCTGCGTCGAGTACGGCAGGGGCCAGCGTTCGCACAGTACGCTCAACGAGTCCTCGATGTCGGCTACCTCGGATCCAGGGGGTAATATTCATCATTGTTATGAATGCGGAAAGAACTTCTCGAACTACGCGAATCTGAAGAGACACGAGAGGAATCTGCACATCAGGCAGAAGAGACGCTGGAGCTGCGACGAGTGCAAGAGGCGATTCAAGTCGCAGGAGGCCTATAACGAACATGTGCAGATGGATCATGGAATTCAGGTTAAGAATCATCAGCAGATGCCACAGCCACCGCCGCAGCCGCAGGTCTCCGCGGCCACGGGCAAGCCCCTGATGCAGTGTCCCAAGTGCCCCCGCACCTTCACCTACCAGGGCAACCTCATCCTCCACTGTCAGAACATCCACAAGGAGAACCACTACGAGCGCGCCAAGGCCGCCAGCGCCACCGTCACGCGTCACTCCGCTCCACTTATGCCCCGTCGCACGGCCACCCTGCTAACCGCCCGCGGCTACACCTGCGACATCTGCGGCAAGACCTTCCGCGAGGAGCAGTCCCTGAAGACCCATCGGGGCTGGCATCTGCGCTCCAATCACCGGCTCAAGACCGACCTGCAGAGGAACACGAGCCTCGACGAGACGTCGATGCCCAGGAGCCCTGGCTACACGATGACCATTGCCcagccacagcagcagcagcagcagtcgacGAAGCCGGCTAAGGCTAGGAAGTCCTTTCCTAATAATCCACCCCAGAAGCAGCTGAACGCCTTGGCGACGGCTGGACTTACGGTCGGGCCGGGGGCGAGTTTGCAGTGCCAGGTCTGCGACGATCGCTTTCCCGATGTGGCGGATTTGAGGAAACACCTCTGGGACGTGCACTGCGCTCGCAACAAGCCCGAGAAGCACTTCGCCAGCGACCTCCAGTGCGAGCTCTGCACCACCAAGTTCCCCGACGAGGAGTCCCTCGAGGAGCACATGAAGTGGCACTTGCAGAACCCCATCCTCAGCGACGGCAACCACTCGAGCAGCAACAACGACGCCGGCCCCTTGCCGGTCAGCCGCAAGACCTTCTACTGCGACATCTGCGGCAAGTACTACAGCAATCGCAAGCTCTTCCTGCGCCACAAGAAGCTCCACAAGGGCCTGCCCGCCACGAGCATGATGAACCTGCAGTCCCTCCAGGCCAAGCGTCCGCACTACTGCCACGCCTGCCAGAAGAACTTCTCCACGGAGGCGTCGCTCAGGCGGCACAAGGCCTCCCCCTGCCACCAGGCGGTGGCCCGCTCCCAGATGCAGGTCTCCTCCAAGAAGATAACGACCACCGCCCTGGTGCACCACCCGCCGCCCGACCACACCAAGCTCCAGGCCGTCAAGCGGGAGCCCGGCGTGGCCGACTACTCGGCCCCCGCATCCCAGACCAGCTTCAAGAAGAAGCCCGTCACCTGCTCCGTCTGCAAGACCATCTTCCCGAACATGAGCGTCCTCTACCAGCACAAGCAGCTCGTGCACAAAGTGCCCCCGGGCGGCAAGTCCTCGGCGGTGGCCGGCCAACAGGCCGGCAACGAGTGCGTGCCCCTCGTCAGCGCCGAGGGCCTCGTCTGCTGCAACGTCTGCGGCAAGCAGTTCCCCGGGATCTCGAATCTCAAGCAGCACTTTGCCCACAAGCACAAAGCCAAGGGGACCTCCTTCCCCTGCTACGCGCCCGGCTGCAAGCTGGTCTTCAGCAGCGCGAGCTCCCTCAAGAATCACGAGACCACCCACTCGAGCATGATCTACAATTGTCACCTGTGCGACAGGCACGTGTTCTCCAGAGCGGCGATGACCAAGCACATGCTCACCATGCACAAGGCCATCTACCAGTCGGGGGCGAACAAGAGCACGCTCTACTCGGAGACGGACCTCACGAATTACCACATCAAGAACTGCCAGAGCACCGCCTGTCCCAAGTGCAAGGTCAAGTATCCGAATCTGAGGGCCCTGAAGATTCATTATCTCAAGTTCCACGATAATAAGTGA
Protein Sequence: MEEEPTAAEAAPEVAPAAAPAAVPAAAASPVQDVVEVNGIGQGACKPDDDDGLDEACRLCLSTDPTRSSIFGVPPTKEAVPFAEKIRSCLAIQVSSNDKLSTLVCTNCIKNINQWHSYKDTCLRSQEKLQQWLASKQNTATLPMVTVKEEPVDVEFPDDTAQNVTNESNTTNHVAPIANSMDVDTEQNATPAINTVVAQVPEPEQPPKVNERIEKDLPPLVRIKSEPVDTEDEDDCNVDVESVNSGELLINPMAVAVANTVNSDRIMEADSTQKFGPKRFGPKKKFRRGPHTHYRGTRLFKKKCIHCKIFLHSKYSYTQHMSRYHGIVNSLSGTNEVVKPPPQPPVNKQKSKLSHHPDNAEPIVDTQNCISPEDAEFEKMIKTDPLTPVQKNIIGQLKTFSCYSCKQTFFDRRHTLNHIRQHMPDLRSYTCIACLTEFSDRSMYKLHCGASFECAMKIALVVPKVGHEKYFTCNMCLRPFNNRRELLTHLAMHADKQYKQLAQPLRSPPKLKPITPAPAVTPLADNSPSKRSISNLTGPYMNGDPAHNHMCDLCGMIYRYKPNMFKHRDLCSTLPDNIRTSYRCVHCSMTYLVYKKFYTHVFNDHKKREITCFTCHARFPTSDEYLAHHETHRVLADKDTDKVNESLANEQPHPEEETEFPMSVDPLDASSEHNQMDQGDNKTFNCALCGESFATKIELTEHRNLHLKVKIYSCVICRSMFSSSGALEGHMKEHGIEDAGEQNANSSCVEYGRGQRSHSTLNESSMSATSDPGGNIHHCYECGKNFSNYANLKRHERNLHIRQKRRWSCDECKRRFKSQEAYNEHVQMDHGIQVKNHQQMPQPPPQPQVSAATGKPLMQCPKCPRTFTYQGNLILHCQNIHKENHYERAKAASATVTRHSAPLMPRRTATLLTARGYTCDICGKTFREEQSLKTHRGWHLRSNHRLKTDLQRNTSLDETSMPRSPGYTMTIAQPQQQQQQSTKPAKARKSFPNNPPQKQLNALATAGLTVGPGASLQCQVCDDRFPDVADLRKHLWDVHCARNKPEKHFASDLQCELCTTKFPDEESLEEHMKWHLQNPILSDGNHSSSNNDAGPLPVSRKTFYCDICGKYYSNRKLFLRHKKLHKGLPATSMMNLQSLQAKRPHYCHACQKNFSTEASLRRHKASPCHQAVARSQMQVSSKKITTTALVHHPPPDHTKLQAVKREPGVADYSAPASQTSFKKKPVTCSVCKTIFPNMSVLYQHKQLVHKVPPGGKSSAVAGQQAGNECVPLVSAEGLVCCNVCGKQFPGISNLKQHFAHKHKAKGTSFPCYAPGCKLVFSSASSLKNHETTHSSMIYNCHLCDRHVFSRAAMTKHMLTMHKAIYQSGANKSTLYSETDLTNYHIKNCQSTACPKCKVKYPNLRALKIHYLKFHDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -