Basic Information

Insect: Gastracanthus pulcherrimus
Gene Symbol: -
Assembly: GCA_949152435.1
Location: OX424574.1:20279087-20288790[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0071 2.1 11.3 0.0 1 23 351 373 351 373 0.97

2 12 0.3 90 6.2 0.4 2 19 376 393 375 395 0.92

3 12 6.4e-06 0.0019 20.9 4.5 2 23 440 461 439 461 0.97

4 12 0.00015 0.045 16.6 0.3 1 23 467 489 467 489 0.98

5 12 0.00088 0.26 14.2 2.6 1 23 495 517 495 517 0.98

6 12 0.00098 0.29 14.0 1.7 1 23 523 545 523 545 0.97

7 12 8.3e-05 0.025 17.4 2.2 1 23 551 573 551 573 0.98

8 12 8e-07 0.00024 23.7 0.5 1 23 581 603 581 603 0.98

9 12 0.0027 0.79 12.6 0.2 1 23 609 631 609 631 0.96

10 12 1.6e-05 0.0046 19.7 2.9 1 23 637 659 637 659 0.98

11 12 1.8e-05 0.0052 19.5 0.6 1 23 665 687 665 687 0.98

12 12 0.00067 0.2 14.5 2.4 1 23 693 715 693 715 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0071	2.1	11.3	0.0	1	23	351	373	351	373	0.97
2	12	0.3	90	6.2	0.4	2	19	376	393	375	395	0.92
3	12	6.4e-06	0.0019	20.9	4.5	2	23	440	461	439	461	0.97
4	12	0.00015	0.045	16.6	0.3	1	23	467	489	467	489	0.98
5	12	0.00088	0.26	14.2	2.6	1	23	495	517	495	517	0.98
6	12	0.00098	0.29	14.0	1.7	1	23	523	545	523	545	0.97
7	12	8.3e-05	0.025	17.4	2.2	1	23	551	573	551	573	0.98
8	12	8e-07	0.00024	23.7	0.5	1	23	581	603	581	603	0.98
9	12	0.0027	0.79	12.6	0.2	1	23	609	631	609	631	0.96
10	12	1.6e-05	0.0046	19.7	2.9	1	23	637	659	637	659	0.98
11	12	1.8e-05	0.0052	19.5	0.6	1	23	665	687	665	687	0.98
12	12	0.00067	0.2	14.5	2.4	1	23	693	715	693	715	0.97

Sequence Information

Coding Sequence: ATGGCAGTCATGGAGGAGTTTGATTATCTATGCCGATTATGTGCCACTAAGATGGACATTCTGATGGGTTTGCCCATCTTCGAGGGTGGCGAGCAGATgagaaatattgataaaaagatCGCTGCTTGCCTACCTATTCAGATTTTGATGACAGACCAATTACCAAAAGTAATATGTGAAGAATGTGCTTTTAAGGTGGATGAACTTTATGATTTTCGGGAAAAAGTTTTGCAAACTGAAGACATGTTTATACAGATGCTGAAGACCATAACCAAGCAAGAAGTCAATTCCCTGGATGATGTTACGATTAATGAAATTCAAGGAAATATAAATAGTCTTGCGAATGGCATTGGCGAAATGCAAAATCCTAATGTCACGAGGCATAATGTTCAAAATGGAATTCATACCATGCCTGTGATAAATAGCATTGGTCTTCCCGGTAGAGATCAAGTTGTAACGCAGGAAGAATTGAATCGAGAAGAGACTGACATAGAAGTGGCTGGTTTTCATTTGGATGGAGAAACAGTAAGAATGGTGGATGAACAAATGCGAGAGGTGTCCAACCAAGAGATAGCCATGCACCTCGACGCCGACATAACCGTGGAGAACCTCACGGTGGGCGGCCACCTCAGCCAACTGGACATCAACTACGTGACATCCATGACCTCCGCTGCGGCCGAAGTCCACTCCCaaaaacaacaacagcagcagcagcagatcaACGTGCACTACTGCGAGGCAGTGAAATTCGAGTCGGTCGGGTCCGAGGAGCTGCAGGACAGACTGACCGCGGTGTCCACGGAGCGCAGCAGTTTTCCGTCCTCCAGGGCCGAGAGCGACATCGACGAGACGTGCAACGCCGGCGACGATCCGTTGAACGCCGCGGCTGCCGACGGCTCCGCCCACTCGTTCTCACTCTCCTCGGCGAGTCACGTCGACACGGGGGACAACGCCGATGGGATCATGGTGCAGTACACGAAGAGCACGAAGAACGCGCTGCTGGAGAGCGCGCTGAATAACCCGACGATCGACGAGACGGGGTCGCATTGGTACGTCTGTCCATTTTGCAACGAAGCCTCCTCGGAACCGAACAATCTCGCCTTGCACTACGAGCAGCACTTCTGCAGCTGTCCCAACTGCGAATTGTACTTTACCAGCATCGAGGCGTTGAATCTCCACAGTCAGGACTGCCTCGAGAGCAAAGACAAAATTGACATCGTCAAGGGTTCCGATGGTTTGCCGCAGGAGCAGCAAAAGCGACAGACGACAGCCGAGAAGAAGCAATCGGGATCCTCCAGGCCTAAATGGACGCCCAAGGTTTGCAGTCATTGCGGCAAGCAGTATCGAACGAATTACAAGCTTAAGGAGCACATGCGCAAGCACACGGGCGAGAAGCCCTTCCAGTGCGCCTTCTGCGAGAAGGCCTTCCGCAGCAAGATCGGCCTGGCCCAGCACACGGCCACCCACACCGGCCAGTTCGACTTCAACTGCTCGACCTGCGGCAAGGGCTTCCAGTGCAAGAGCTACCTCATCGTCCACCAGCGCGTCCACTCCGACCTCAAGCCCTACGCCTGCACGACCTGCAGTCAGAACTTCAAGACCAAGCAGTCGCTGCTCGACCACGAGAATCGACACATGGGCGTCAAGCCCTACACCTGCGAGATATGCGGCAGGAGCTTCATCACCAAGGGACTCTGCAAGAGCCACCAGAAGATACACTCGGGCATGGATAACAGGCAGTATCCCTGTGTTGTGTGTAACAAGATGTTCGTCAGCAAGAGTTATCTCAACACGCATCTGAGGATTCACACGGGGGAGAAGCCCTATGTCTGCGAGGTCTGCGACAAGGGCTTCCTGACGCGGGTCGACCTCAAGATCCACTCGACCATGCACACCGGTGAGAAGTCCTTCAAGTGCGACCTCTGCGGCAAGGTCTTCGCCCGTCGGTCGGCCCTGCGCTGCCACCGTCGCTCCCACACCGGCGAGCGTCCCTATCGCTGCGAGATCTGCGGCAAGACCTTCACCCAATTCAGTCCGATGGCCATACACAAGCGACTGCACACGGGCGAGCGACCCTACGAGTGCGACGTATGCGGCAAGGCCTTCGTCTCGAGGTCGACGATGATGTGCCACAGGAAGAAGCACAAGGCGGAGACGGAGCCGCTGCCCGCGGCCACGGGGAAGACGCAGAAGGAGGAGGAGACGCTGCAGCGGAAGGAGCCGGAGGGAGAGGGAGGAGAGGCTGCCAGCAGGAAGGAGACGCTGGTGGCGAGCGGGGATTCGGGGGTCAAGGAGTGA
Protein Sequence: MAVMEEFDYLCRLCATKMDILMGLPIFEGGEQMRNIDKKIAACLPIQILMTDQLPKVICEECAFKVDELYDFREKVLQTEDMFIQMLKTITKQEVNSLDDVTINEIQGNINSLANGIGEMQNPNVTRHNVQNGIHTMPVINSIGLPGRDQVVTQEELNREETDIEVAGFHLDGETVRMVDEQMREVSNQEIAMHLDADITVENLTVGGHLSQLDINYVTSMTSAAAEVHSQKQQQQQQQINVHYCEAVKFESVGSEELQDRLTAVSTERSSFPSSRAESDIDETCNAGDDPLNAAAADGSAHSFSLSSASHVDTGDNADGIMVQYTKSTKNALLESALNNPTIDETGSHWYVCPFCNEASSEPNNLALHYEQHFCSCPNCELYFTSIEALNLHSQDCLESKDKIDIVKGSDGLPQEQQKRQTTAEKKQSGSSRPKWTPKVCSHCGKQYRTNYKLKEHMRKHTGEKPFQCAFCEKAFRSKIGLAQHTATHTGQFDFNCSTCGKGFQCKSYLIVHQRVHSDLKPYACTTCSQNFKTKQSLLDHENRHMGVKPYTCEICGRSFITKGLCKSHQKIHSGMDNRQYPCVVCNKMFVSKSYLNTHLRIHTGEKPYVCEVCDKGFLTRVDLKIHSTMHTGEKSFKCDLCGKVFARRSALRCHRRSHTGERPYRCEICGKTFTQFSPMAIHKRLHTGERPYECDVCGKAFVSRSTMMCHRKKHKAETEPLPAATGKTQKEEETLQRKEPEGEGGEAASRKETLVASGDSGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01035665;
90% Identity: -
80% Identity: -