Basic Information

Insect: Gastracanthus pulcherrimus
Gene Symbol: -
Assembly: GCA_949152435.1
Location: OX424574.1:173846787-173853491[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00036 0.11 15.4 4.0 1 23 237 259 237 259 0.98

2 11 0.033 9.9 9.2 11.8 1 23 265 287 265 287 0.95

3 11 0.00013 0.039 16.8 6.8 1 23 293 315 293 315 0.99

4 11 5.7e-05 0.017 17.9 1.0 1 23 321 343 321 343 0.95

5 11 5.3e-06 0.0016 21.2 1.2 1 23 349 371 349 371 0.97

6 11 9.4e-06 0.0028 20.4 0.2 1 23 377 399 377 399 0.97

7 11 0.00012 0.034 16.9 1.6 1 23 404 426 404 426 0.97

8 11 5.3e-06 0.0016 21.2 0.0 1 23 432 454 432 454 0.96

9 11 0.00091 0.27 14.1 0.4 1 23 466 488 466 488 0.98

10 11 2.4e-06 0.0007 22.3 2.0 1 23 558 580 558 580 0.97

11 11 6.6e-05 0.019 17.7 4.6 1 23 590 612 590 612 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00036	0.11	15.4	4.0	1	23	237	259	237	259	0.98
2	11	0.033	9.9	9.2	11.8	1	23	265	287	265	287	0.95
3	11	0.00013	0.039	16.8	6.8	1	23	293	315	293	315	0.99
4	11	5.7e-05	0.017	17.9	1.0	1	23	321	343	321	343	0.95
5	11	5.3e-06	0.0016	21.2	1.2	1	23	349	371	349	371	0.97
6	11	9.4e-06	0.0028	20.4	0.2	1	23	377	399	377	399	0.97
7	11	0.00012	0.034	16.9	1.6	1	23	404	426	404	426	0.97
8	11	5.3e-06	0.0016	21.2	0.0	1	23	432	454	432	454	0.96
9	11	0.00091	0.27	14.1	0.4	1	23	466	488	466	488	0.98
10	11	2.4e-06	0.0007	22.3	2.0	1	23	558	580	558	580	0.97
11	11	6.6e-05	0.019	17.7	4.6	1	23	590	612	590	612	0.96

Sequence Information

Coding Sequence: ATGTGCACCACACCTGGGAACACCGGCACCGGGTTTGGCTATGCCACATGGTCATTCAGCGGACCCGGCAACGACAGCCGGGAGAACACCCAAAGCGACATCGCCGGTACCATCAGCTATGCAGCCGTCAACAACAATCAGGATCAGGGCTCCAGTCCCAAGATACAGATCGACgtcaagccagccaagatacAGAACAGCGCCCACAGGAGGACCATGTTCACCATGAACGAGAGCTGCCAGCAGACTCCCACCGCCGCTCACCATGGCCACACGACGGGGGGCCACAATCAAACCAGCCACGTGACCCACGTCAGGACGAAGAAGTCCCACCACGACGTCTTTGCCCTGACCTGCGACAAGGGGGGCTGCAACTGCGATGCCCATCACTCCACCCCGCCGCCCTCCCTCTTTCCCAACACCCTGGTGTTCGCCACCGACAAGCACACCATGAGCAAGCACTTCATGACTCCCATAGGTCCGCTGCAGCTGACGGCGGAGGAGTGCAACGAGATCCTGATGAAGCGAGCCGCAGCCGCCACCAGCCAGTCCAACTCCAACAACGTGGCCTCCAGCCAGACGGACGCCACGGCTCACTTTGGCCACGTTCTCACCCATGTAAATACCAGCCAGGTGGACACCAAGAACATCACGAGCAAGCAGCAGCAGGACATGGGGTCGCAGGTGCGAGTCCCCAAGGAGCGGCCCTACTCCTGCACCGAGTGCGGCAAGTCCTTCCTCCTGAAGCACCACCTGACGACCCACGCGCGAGTGCACACGGGCGAGCGACCCCACATCTGCGTCCACTGCGGCAAGAGTTTCGCGCACAAACACTGTCTGCACACTCACCTGCTGCTCCACAGCGCGGAGCGACCCTTTCAGTGTCGCGAGTGCAAGAAGTCCTTCACCCTCAAGCACCACCTGGTGACCCACACCCGGGTCCACACGCGCGAGCGGCCCTTCGTCTGTCCGGAGTGCGGCAAGGCCTTCCCCCTGAAGCGCCACCTCGTCACGCACAGCAAGTTCCACACGGGCGAGCGGCCCTTCGTCTGCGAGGAGTGCGGCGAGTCCTTCGCCCAGAAGGAGCACCTGACCATGCACTCGCGCTTCCACGGCAGCCTGCATCCCTTCGTCTGTCCCGACTGCGGCATGAGCTTCCAGAGGAAATTCGAGCTGGTCAATCACGGCCGGCTGCACGGCAGGATACCCCACTCCTGTACAGTCTGCGGGAAGGAGTTCCTGCAGAAGAGGACCCTGCTGGCGCACATGAGACTGCACACGGGCGAGACGCCCTTCGCCTGCACGGTCTGCGGCGAGGCCTTCCCCAGGAAGTCCGATCTCATAGCCCACTCCAAGATTCACAATAGTAGTAATTCCGACTCGGATACCAAGCCGTTTACGTGTCGGGAATGCGGACTAGAGTTTAATAACAGGGAAGCCCAGACTTTGCATTTAAGGTTACACTCGGCGGATAGGACACTAGTGACCGATCTTTGTGGACTAGCTGCGACGTTTCAACAGACAACGGGACACTTTCTTACAGCTAACACCTCTGGCTCGCACCAGATGAACGGACCGCTGGGCGCGTCGGTGGCGAACGTCGTCAGTCACATGCACGGCGCGGCCACCCAGACCTCGCCGCCCGTCGGCGCGGGTCCCAAGCCCAAGCCCCACATCTGCCCGGACTGCGGCCGGGGCTTCGCCCAGAAGCACGGCCTCTCGCAGCACCAGCGCCGCCACACGGACGGCAGCTGCCACATCAGATCGCACATATGCGACAAGTGCGGCAAGGCCTTCTTCCAGAAGAACCACCTGCTGCTGCACCAGCGCCAGCACATGGACCCGCCGCCCAGCATAGTGCGCCAGCAGCAGCGCCAGGCCGCCCAGGCAGCGGCTCAGGCGGCCCAGCAGGCGACCGGCGGCTCGGCCGGCGCGCAGGTCATCACCGTGGACGGCACGCAGACCTGCACCGTCGACACCAAGGCCATCGCCCTGCAGGCGATACAGCAGGcggcgcagcagcagcaacagcaggcggcgcagcagcagcagcagcagcaacagcagcagcagcagcagcaacaacagcagcagcagcagcaagcgcAACAACAGGCAGCGCAGCAGCAAGCGGCGCAGCAGCAACAagcgcaacagcagcagcagcagcagcaggcgtGCACCGTGGATAACACTAAAGCAATACAGTTGAACGTCACCATGTGA
Protein Sequence: MCTTPGNTGTGFGYATWSFSGPGNDSRENTQSDIAGTISYAAVNNNQDQGSSPKIQIDVKPAKIQNSAHRRTMFTMNESCQQTPTAAHHGHTTGGHNQTSHVTHVRTKKSHHDVFALTCDKGGCNCDAHHSTPPPSLFPNTLVFATDKHTMSKHFMTPIGPLQLTAEECNEILMKRAAAATSQSNSNNVASSQTDATAHFGHVLTHVNTSQVDTKNITSKQQQDMGSQVRVPKERPYSCTECGKSFLLKHHLTTHARVHTGERPHICVHCGKSFAHKHCLHTHLLLHSAERPFQCRECKKSFTLKHHLVTHTRVHTRERPFVCPECGKAFPLKRHLVTHSKFHTGERPFVCEECGESFAQKEHLTMHSRFHGSLHPFVCPDCGMSFQRKFELVNHGRLHGRIPHSCTVCGKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKSDLIAHSKIHNSSNSDSDTKPFTCRECGLEFNNREAQTLHLRLHSADRTLVTDLCGLAATFQQTTGHFLTANTSGSHQMNGPLGASVANVVSHMHGAATQTSPPVGAGPKPKPHICPDCGRGFAQKHGLSQHQRRHTDGSCHIRSHICDKCGKAFFQKNHLLLHQRQHMDPPPSIVRQQQRQAAQAAAQAAQQATGGSAGAQVITVDGTQTCTVDTKAIALQAIQQAAQQQQQQAAQQQQQQQQQQQQQQQQQQQQQAQQQAAQQQAAQQQQAQQQQQQQQACTVDNTKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00144040;
90% Identity: iTF_00464131;
80% Identity: -