Basic Information

Insect: Gastracanthus pulcherrimus
Gene Symbol: -
Assembly: GCA_949152435.1
Location: OX424574.1:13213014-13222151[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 9.9e-05 0.029 17.2 0.3 1 23 102 124 102 124 0.99

2 24 9.5 2.8e+03 1.5 5.0 1 23 270 293 270 293 0.96

3 24 0.0043 1.3 12.0 1.2 1 23 305 327 305 327 0.98

4 24 0.0084 2.5 11.1 1.7 1 23 343 366 343 366 0.97

5 24 0.085 25 7.9 2.9 1 23 383 406 383 406 0.96

6 24 0.00017 0.051 16.4 1.1 1 23 412 435 412 435 0.94

7 24 0.002 0.59 13.0 0.7 3 23 442 463 440 463 0.93

8 24 0.009 2.7 11.0 0.4 1 23 468 491 468 491 0.96

9 24 1e-07 2.9e-05 26.6 0.8 2 23 498 519 498 519 0.97

10 24 2.2e-06 0.00065 22.4 0.6 1 23 525 547 525 547 0.96

11 24 1.6e-06 0.00047 22.8 0.1 1 23 553 575 553 575 0.98

12 24 2.3 6.8e+02 3.4 2.5 2 23 932 954 932 954 0.96

13 24 0.44 1.3e+02 5.7 4.9 3 23 989 1010 988 1010 0.97

14 24 6.3 1.8e+03 2.1 0.2 2 23 1043 1065 1043 1065 0.86

15 24 0.058 17 8.4 4.6 1 23 1133 1155 1133 1155 0.98

16 24 6 1.8e+03 2.1 0.8 1 23 1166 1189 1166 1189 0.92

17 24 0.041 12 8.9 1.6 1 23 1236 1259 1236 1259 0.97

18 24 0.37 1.1e+02 5.9 2.2 1 23 1278 1301 1278 1301 0.93

19 24 0.00018 0.053 16.3 1.9 1 23 1307 1330 1307 1330 0.95

20 24 0.0012 0.34 13.8 1.5 2 23 1336 1358 1335 1358 0.93

21 24 0.0019 0.55 13.1 0.5 1 23 1363 1386 1363 1386 0.97

22 24 2.9e-06 0.00087 22.0 0.2 2 23 1393 1414 1393 1414 0.97

23 24 5.5e-05 0.016 18.0 0.6 1 23 1420 1442 1420 1442 0.98

24 24 1.4e-06 0.0004 23.0 0.2 1 23 1448 1470 1448 1470 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	9.9e-05	0.029	17.2	0.3	1	23	102	124	102	124	0.99
2	24	9.5	2.8e+03	1.5	5.0	1	23	270	293	270	293	0.96
3	24	0.0043	1.3	12.0	1.2	1	23	305	327	305	327	0.98
4	24	0.0084	2.5	11.1	1.7	1	23	343	366	343	366	0.97
5	24	0.085	25	7.9	2.9	1	23	383	406	383	406	0.96
6	24	0.00017	0.051	16.4	1.1	1	23	412	435	412	435	0.94
7	24	0.002	0.59	13.0	0.7	3	23	442	463	440	463	0.93
8	24	0.009	2.7	11.0	0.4	1	23	468	491	468	491	0.96
9	24	1e-07	2.9e-05	26.6	0.8	2	23	498	519	498	519	0.97
10	24	2.2e-06	0.00065	22.4	0.6	1	23	525	547	525	547	0.96
11	24	1.6e-06	0.00047	22.8	0.1	1	23	553	575	553	575	0.98
12	24	2.3	6.8e+02	3.4	2.5	2	23	932	954	932	954	0.96
13	24	0.44	1.3e+02	5.7	4.9	3	23	989	1010	988	1010	0.97
14	24	6.3	1.8e+03	2.1	0.2	2	23	1043	1065	1043	1065	0.86
15	24	0.058	17	8.4	4.6	1	23	1133	1155	1133	1155	0.98
16	24	6	1.8e+03	2.1	0.8	1	23	1166	1189	1166	1189	0.92
17	24	0.041	12	8.9	1.6	1	23	1236	1259	1236	1259	0.97
18	24	0.37	1.1e+02	5.9	2.2	1	23	1278	1301	1278	1301	0.93
19	24	0.00018	0.053	16.3	1.9	1	23	1307	1330	1307	1330	0.95
20	24	0.0012	0.34	13.8	1.5	2	23	1336	1358	1335	1358	0.93
21	24	0.0019	0.55	13.1	0.5	1	23	1363	1386	1363	1386	0.97
22	24	2.9e-06	0.00087	22.0	0.2	2	23	1393	1414	1393	1414	0.97
23	24	5.5e-05	0.016	18.0	0.6	1	23	1420	1442	1420	1442	0.98
24	24	1.4e-06	0.0004	23.0	0.2	1	23	1448	1470	1448	1470	0.98

Sequence Information

Coding Sequence: ATGCGTCTGTTCAAATGTGGGTACCTCAGCACCAGTCCCTCGCCCAAATCCAAGAAAGTCTTCCGAAAAATCGCCCCGAAGGTCAAGATCCCCGTCGTCGGCCCCGTCATCAGGCCTGTCATCGCTCCAAAGTCCTCGATGACACTCTACCAGATCTCCTACGTCAACGGCAAGGCATCCTATTCCCTCGTGCCCATGAAGAAGGCCGGTACACCACCGTCCAAACCATCATCACCTAAAAAGAAGAAAGCTACCGCCACCAAAATCACCACCTCGTCAGCTGCTGATAACAAAGAACAAGAATACACTTGTGGAGAGTGCGGACTGAAATTCGCCACGCAGGTCAGACTCAATTGGCACAGATCTACGCACAACCCACTCAAGAAGACAGGAATGAAGCCAGCGACAGGTACGAGGTCTCGTAGAAAAAAGACTGCTCCCAAGTCGTATGCAGAATTCGAGGAAGATGAactaccaccaccaccgccaccgccaCCCTCGCCTCCAAAGAAAGCAGTCCAAAAATCTGAGAAGGCTCTGATGTTTATCTGTCCATCCTGTGAATTCAGTACGAACAACCGTAGCATCATGGTCGATCACTTCTCCAGTGAGCACTGCTTGAAACCCTCCGAAATCAAGATAGAACCAAGCGAAGAGTCTACTCTCGACATCAACGAAGACGAAGACATCGATGAAGATCCACAATTCGAGCCCGTAGTACAGTTGACCTGTCCACAATGCAACTTCAGCACCTTCAACCAGGACGACCTCGACTTCCACACCTGTCTGCCCTCCGATGCTCGCTCCTTCACCTGTCACCTCTGCACCTACGAGTGCCTCACTCGCATGGGCCTCCAGAGCCACATCACCAGGAAGCATCGACCAAAACCCGAGCTCAACGCCAGCAACAGCTACGACTGCGACGAGTGCGACTTCAGAAGTGTCAACAAAACAACCCTGTACGCGCACAAGCGCAGGCATCGCGATGGCAAACCCAATGCCAGTGTGAAGGTgggagaaaattgtttttactgcAACGAGTGCGACTTCTCAGCGAGATCGAAGGCTGCGCTGCATTTGCATTTGCAGAGGAGGCACAAAGCGACCATCACCGGGGAACAGGAGAAACCCGACCGACCGGAGTTTTACAGCTGTGATCATTGTGATTACACGAATAAGAATAAGTACGAGATGAAGGTGCACGTGATCAGGAAGCACACGAATGAGTACAATCATGCGTGCGAGGTGTGTGGTAAGAAGTACAAGATCAAGGGTGATCTGACGAATCACATAAGGTTCCAACATAGGGAGCAGCCTATTATATGTGATGTTTGTGGCAAAACTTGCGGTAACAGCAATTCGCTCTACGTCCATCAGAAGTTTGCTCATTACAAAGCTGAATTCGAGTGTCCCATCTGTCATCGAAGAATGGTGAGCCAGGCTAATTTGGACGAACACGTACTGAAGCAGCATGAACAGAGAGAAGATGCAGTGTGCGAAGAGTGCGGAAAAACATTTACCAGACAGAGTAGATTGAAGATTCACATGAGGATCCATACTGGGCTGAAGCCCCACGCGTGCAAGATCTGTGGAAAGGCCTTTGCCAGAAAGACAGCGCTCAGGCAGCATCTGTTGATTCATACGGGCCAGAGGCCATATGTGTGCGATATATGTGGCAAGGCATTTACTCAGAAGCCGGGACTGATCAGTCACAGGAAGAGCCACCCTGGAAGTCATCCACCGCTGCCCAGGGTCACCATCGATCACGTGCTGTCGGAATTGTTGACTGAAGGCGAGGCAATCAAAGCCCGAACAAAAGCATTCACAGACTCTCCCGACGCCGCATCGACGCACCGCATCGCCGAGAGCGCTATAACGCATTCTCTTTCTCGTTTCAGagccaagcagcagcagcagcagcagcagcagacgacaCCGACGAAGAGGATCGTCATCAACAGCAGGAGCAGCGGCCGTAGCATCCGCGAGCGCTTACTGGCCAGCAAGCGCTTCGTCTTCCAGAAGAAGCTCGTCAAGATCAATCCCTGGCAGGTGATGCGCAAGGGTGGCAAGCTCCTCTCCGTGGCCACCCCCATGGTCCAGGTGAAGATCGAGCCGTCGgaggtgcagcagcagcagcagcagcagccgccggtCTCCAGCAGCGACTTCGAGGAGGTCTCCATCGACGGCAGCCACCCGAAGAAGCATCCGGACGCCGCGACCGTCGTCTCGCCACCTAGAAAGACCCAGGACATCGTCGTCTACATGTGCAAGCCCTGCAGCATGTACTTCCCCCTGAGGAGGATGCTCGAGTTGCACAACGCCACTGCCCACGAGAACTCCGACCCAACGGCAGCCAAGGACACGACGAGCCAGGAAGAGCTGGAGCCGGCCACCGAGGAGCCGACCAGGAGCATACTCAGCTCGATAAAGAAGAAACACCGAAGCGAGCCCGCCAACATCCGCTACCAGGGCTACCGCAAACTAACCAGCGGCCGGTACGCCTGCGACCACTGCGAGTTCACGTCCTTGGTGCGCACCACCGTCTCCTCGCACTCGAGTCGCAAGCACTCGCTCCTCCCCCCGGAGTCCGGTACACCAGCAGCAACACCGGCGGGGCACGTCGAGCCGAAGCTCGAGGAGGCAGCGGGGctcgaggacgacgacgagtcGTCCTGGCCGATGGAAGTGGTCGAGGAGTCCGTCGAGGACGAGGAGCCGGAGGAAGGGCCGGAGGAAGGGCCGGAGGAAGGGCCGGAGGCCGCGGATCCCTACGGACCGAAGCTTCGCACCTGTCCCTTCTGTCCCTTCGTCTCCAGCAAGGGCTCGACCTTCCACTCGCACGTCAAGCGCAAGCACCGCGACAGCTGGCTGAAGAACGTGGCCCAGAAGGTCGCGGCTCTGCAGCGCCAGCAGCAGTCCAGCGCCGGCGCGGGCCCAGAGTCGGCGGTCGAGCTCCTCTGCCGCTACTGTCCCTTCAAGAGCTGCAAGCGCTCGACCCTCAACTCGCACGTCAGGCGCAAGCACCTCGACTCCCCCGAGGACGATCTCGCGAATCCCGCGAGCTTCGCCGACGGCCCCGGGGACGAGTCGAGCGAGAGGGAGGAGGGCAGGCGAGCTCGAAAGTGTCCCTACTGCCCGTTCGAGACGTGGATCAACTCCACCTTGAACTCCCACGTGGCCAGACGTCATCGGCAACGTCCTCACCCCCTGGCCGAGAAGGGCCCGGAGAGCAAGAGCGCTCGGCGCACTCATCACAATGCTCAGCTGTACACGGGCTACGCCTGTCATTATTGCACCTTCGCTGCGGCCACCGTCGCCAGTATTCGAGGGCACACCATCAGGGACCACGCAGGGATGAAGCAGCCCCTGCAGGAGGTGCCCGTCACGGAGTACGACTGCGACCACTGCGAGTTCAAGTCGAGGAACAGGAGGAACATGCAGCTGCACTTGAAGAAGCACGACAAGCAGCAGGCGAACAGCGAGGGGATGTTCCCTTGTCACGCCTGCTCGTACGAGACCCTGTCGAGGATGGGACTGCAGAGGCACATCTCCATCAAGCACAGTGTCTCGAAGCAGATGTCCGCCAGTGCTTACCACAAGTGCGAGCAGTGCGACTTCAAGAGCTTGAACAGCAAGATCATGGACTGGCACAAGAGGCAGCACACCGCACCGCCCAGTGCCGAGGACGACGGGAACAGCTACTTTTGCAACGATTGTGAGTTCTCCACGTGGACCAAGGGCCAGCTGTACCAGCACATCAGGAGGAAGCACAGGGACGCGGAGGGAAACGAGAGGGAGCCCGAGGCGGAGAACATGGAGCAGGTCTTCCTGTGCGATCAGTGCGATTATACCAGTAAGAACAAGCACGTGATGAAGGTGCACGTGATTAGGAAGCACACGAGCGAGTACAATCACGAGTGCGAGACTTGTGGTAAGAAGTACAAGATTAAAGCCGATCTGACTAATCACATCAGGTTCCAGCACAGAGAGCAGCCGATCATGTGCGACGTTTGCGGCAAGACCTGCAGGAACAGCAATTTGCTCTATCTGCATCAGAAGTTTGCGCACTACAAGCCCGACTTCGAGTGTCCCATTTGCCACAGAAGAATGGTCAGTCAGGCGAATTTGGACGAACACATACAGAAGCAACACGAGCGCAGAGAAGACGCCGTGTGCGAGGAGTGCGGGAAGGTTTTCAGAAAGGCAGCTAGGTTGAAGATTCACATGAGAGTGCACACGGGTCTCAAGCCCTACTCCTGCAAGGTCTGCCTGAAATCCTTCGCCAGGAGAAACGGACTGAGACAACACCTGCTGATTCACACGGGAAAGAGGCCGTACATCTGCGACATCTGTGGCAAGGCGTTTACTCAGAAGACAGGGCTGATCAGTCACAGGAAGGTTCATCCTGGCGATCATCCACCACTGCCCAGGGTCACCATCGATCATGTACTCACCGAGCTACTCCACGAGGAGGCTTGA
Protein Sequence: MRLFKCGYLSTSPSPKSKKVFRKIAPKVKIPVVGPVIRPVIAPKSSMTLYQISYVNGKASYSLVPMKKAGTPPSKPSSPKKKKATATKITTSSAADNKEQEYTCGECGLKFATQVRLNWHRSTHNPLKKTGMKPATGTRSRRKKTAPKSYAEFEEDELPPPPPPPPSPPKKAVQKSEKALMFICPSCEFSTNNRSIMVDHFSSEHCLKPSEIKIEPSEESTLDINEDEDIDEDPQFEPVVQLTCPQCNFSTFNQDDLDFHTCLPSDARSFTCHLCTYECLTRMGLQSHITRKHRPKPELNASNSYDCDECDFRSVNKTTLYAHKRRHRDGKPNASVKVGENCFYCNECDFSARSKAALHLHLQRRHKATITGEQEKPDRPEFYSCDHCDYTNKNKYEMKVHVIRKHTNEYNHACEVCGKKYKIKGDLTNHIRFQHREQPIICDVCGKTCGNSNSLYVHQKFAHYKAEFECPICHRRMVSQANLDEHVLKQHEQREDAVCEECGKTFTRQSRLKIHMRIHTGLKPHACKICGKAFARKTALRQHLLIHTGQRPYVCDICGKAFTQKPGLISHRKSHPGSHPPLPRVTIDHVLSELLTEGEAIKARTKAFTDSPDAASTHRIAESAITHSLSRFRAKQQQQQQQQTTPTKRIVINSRSSGRSIRERLLASKRFVFQKKLVKINPWQVMRKGGKLLSVATPMVQVKIEPSEVQQQQQQQPPVSSSDFEEVSIDGSHPKKHPDAATVVSPPRKTQDIVVYMCKPCSMYFPLRRMLELHNATAHENSDPTAAKDTTSQEELEPATEEPTRSILSSIKKKHRSEPANIRYQGYRKLTSGRYACDHCEFTSLVRTTVSSHSSRKHSLLPPESGTPAATPAGHVEPKLEEAAGLEDDDESSWPMEVVEESVEDEEPEEGPEEGPEEGPEAADPYGPKLRTCPFCPFVSSKGSTFHSHVKRKHRDSWLKNVAQKVAALQRQQQSSAGAGPESAVELLCRYCPFKSCKRSTLNSHVRRKHLDSPEDDLANPASFADGPGDESSEREEGRRARKCPYCPFETWINSTLNSHVARRHRQRPHPLAEKGPESKSARRTHHNAQLYTGYACHYCTFAAATVASIRGHTIRDHAGMKQPLQEVPVTEYDCDHCEFKSRNRRNMQLHLKKHDKQQANSEGMFPCHACSYETLSRMGLQRHISIKHSVSKQMSASAYHKCEQCDFKSLNSKIMDWHKRQHTAPPSAEDDGNSYFCNDCEFSTWTKGQLYQHIRRKHRDAEGNEREPEAENMEQVFLCDQCDYTSKNKHVMKVHVIRKHTSEYNHECETCGKKYKIKADLTNHIRFQHREQPIMCDVCGKTCRNSNLLYLHQKFAHYKPDFECPICHRRMVSQANLDEHIQKQHERREDAVCEECGKVFRKAARLKIHMRVHTGLKPYSCKVCLKSFARRNGLRQHLLIHTGKRPYICDICGKAFTQKTGLISHRKVHPGDHPPLPRVTIDHVLTELLHEEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -