Basic Information

Insect: Gastracanthus pulcherrimus
Gene Symbol: -
Assembly: GCA_949152435.1
Location: OX424576.1:176235720-176252699[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.07 21 8.2 2.4 1 23 401 423 401 423 0.98

2 18 0.1 30 7.7 1.6 2 23 468 489 467 489 0.95

3 18 0.0068 2 11.4 1.0 2 23 552 573 551 573 0.97

4 18 0.0014 0.42 13.5 1.2 2 23 621 643 620 643 0.93

5 18 6.3e-05 0.019 17.8 5.0 1 23 648 670 648 670 0.94

6 18 0.0011 0.33 13.8 0.7 1 21 677 697 677 701 0.92

7 18 0.02 6 9.9 3.9 2 23 789 810 788 810 0.96

8 18 7.7e-05 0.023 17.5 3.9 1 23 861 883 861 883 0.97

9 18 0.00044 0.13 15.1 0.7 1 20 888 907 888 909 0.94

10 18 0.082 24 8.0 0.3 2 23 920 941 920 941 0.97

11 18 2e-05 0.0059 19.3 0.7 2 23 979 1000 978 1000 0.97

12 18 4e-05 0.012 18.4 1.6 1 23 1005 1027 1005 1027 0.95

13 18 0.00025 0.072 15.9 0.7 1 23 1033 1055 1033 1055 0.99

14 18 7.1e-06 0.0021 20.8 0.4 1 23 1073 1095 1073 1095 0.95

15 18 5.8e-07 0.00017 24.2 0.6 1 23 1101 1123 1101 1123 0.99

16 18 6.3e-05 0.019 17.8 0.2 1 23 1129 1151 1129 1151 0.97

17 18 0.00023 0.069 16.0 4.1 1 23 1157 1179 1157 1179 0.96

18 18 0.017 4.9 10.2 0.4 1 20 1185 1204 1185 1206 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.07	21	8.2	2.4	1	23	401	423	401	423	0.98
2	18	0.1	30	7.7	1.6	2	23	468	489	467	489	0.95
3	18	0.0068	2	11.4	1.0	2	23	552	573	551	573	0.97
4	18	0.0014	0.42	13.5	1.2	2	23	621	643	620	643	0.93
5	18	6.3e-05	0.019	17.8	5.0	1	23	648	670	648	670	0.94
6	18	0.0011	0.33	13.8	0.7	1	21	677	697	677	701	0.92
7	18	0.02	6	9.9	3.9	2	23	789	810	788	810	0.96
8	18	7.7e-05	0.023	17.5	3.9	1	23	861	883	861	883	0.97
9	18	0.00044	0.13	15.1	0.7	1	20	888	907	888	909	0.94
10	18	0.082	24	8.0	0.3	2	23	920	941	920	941	0.97
11	18	2e-05	0.0059	19.3	0.7	2	23	979	1000	978	1000	0.97
12	18	4e-05	0.012	18.4	1.6	1	23	1005	1027	1005	1027	0.95
13	18	0.00025	0.072	15.9	0.7	1	23	1033	1055	1033	1055	0.99
14	18	7.1e-06	0.0021	20.8	0.4	1	23	1073	1095	1073	1095	0.95
15	18	5.8e-07	0.00017	24.2	0.6	1	23	1101	1123	1101	1123	0.99
16	18	6.3e-05	0.019	17.8	0.2	1	23	1129	1151	1129	1151	0.97
17	18	0.00023	0.069	16.0	4.1	1	23	1157	1179	1157	1179	0.96
18	18	0.017	4.9	10.2	0.4	1	20	1185	1204	1185	1206	0.89

Sequence Information

Coding Sequence: ATGGACGCCACGCAGGAGGTCCGGCCGcccgacgaggacgaggacgacgagcCCCGGGAGGTGTCGATCGGCGTGCCCTCGTCGTCGGAGGCCGAGGCCCAGCAACAGCTGGAGATCTGCAGGGTCTGTCTGCTGGAGGACGGACCGGCGTCGATGCGCGGCTTGTTCCAAGAGGAGGAGGACGCCGACGATTCCTCCTCCTCGATGCTGTCCGAGAAGGCGATGCGCCTCGCCAGCGTTAAGatAATGCCTGGAGATGGATTGCCCTCTCAAATCTGTTGTGATTGTAGTGATAAACTCGAATCGGCATATAAGTTCAAATTGCAAGTTGAACAGGCTGACACTGTATTGCGAGATAGATTGGACTTGCACATAAAGGAGGAACTCTTTTTTGGTGATGTAGACGTTAATTTGACCTCCCACAAAAGTGATGTAGAAGAAATAATGGGAGAGAGTTTGCTTCTTAAGGATCATATGGATTTGCTGGATGTTCGAAAAATACGTGAAGGTGACATTGATTCTCAAAGTCAAGATATAGAGAAACAGATAGACAATGTTGATCTTGAACAACATGAAATAGAAAAGCACGATGCTGAAGAAATGCATCAACAGCTGATTCAAGATGAACAGATGCACATACAAAGTAATGAAgaagttatgaaaattcatAATGAACAACAGATTGAAAATCAAGAGAGTGATGAACAACagattcaaaataaagaaagtgaTACACAACGAGTTCAAAGTCAAGAAGAAATGCAACAGGTATTGGATGAACAACATAATCAATCATTCGAAACGCAGGAACTTCAAGAGATGATGCTTAATGAAATCAGTGAACAGGAAAGAATGCAAGAGGAATTGAACCAAACTCAACAGTTGGCAATGCACGAACATAATTATGTAGCGGAAGCACAGCCATGTCAGTTTGCTGACAAAAATAATGCATCAAACCCAGagGAAATGGAACAAGACAGTaaagaaaacatagaaaaagaACCAATGAATGAACAAATTGATGTTTATGGTGTGCCACAGGAATCTTCCCCAAGCGAAGCAATTCGTAGAAGTAAACGCAACATTAACCTGAGAAAAGCTATTGTAGACCGAGACTCTGACGAAGAAAATTACTTCGAGAACCTCAATCTCAGCTCTAGATTAAAGAAGGTTCAGTCGGAAAAGTCAGAGAAGATTTACTACATGTGTTACCTGTGCGACAGACAATTCCTATCGAAGGATGTTCTAAAGGAACACATGCACTCTCATGAAGAAGTACGCAAAACCCTTTCACTCTCAAAAAAGTCCCCAGAAAAGCTACTAAAAACACCAGAGAAGTCTCAAATCGAAATCACAAGTCCCACTTCTTCGAAGCCACCATCCAGTGGAAAACGCCCAAGCACTTGCCCCCACTGTGGAAAGGAATACCTCTATATCATTTCTTTCAACAAGCACTTGAAGCAACATGAAAGAGAGAAACAAGAGATGAAGGTGGACTCCATGCCTCTGGAAGTTTCTTTCCAAGAGGATGATGACATCCTGGACTTCCATGATTACGGGGACAATCCTGCCATGGATTCCGATAGCGAAGaggagataaaaaaggaagatgaTGTACCGGTGAAGAACGAATCGAAGAAACACGGTTTGATGAAGTGTAATGTTTGCGAAGAGCAGTTCGATGATACGGATAAACTCAAGGAGCATCGAACGAAGCATGTAGTTGAGGGTATACTCACTGAGCAGGATTTACAGGATGATATCAAGCAATTTGAAGTACcagAAACAACCCCCGAAGCTCCTCCAAGCACCGATGACGCCACACTGGAGCCCCGCAAGCCCACCACCGGGCAGAACCTCAGCTGTCCTCACTGTCCGGCCGTCTACGCCCACAAGAAGTCCCTCTCCCGTCACGTGGACAGCAGCCACCGGGGCGCCAAGTTCGCCTGCAAGCTCTGCCACCAGAGCTTCAGCCGCAAGGACCACCTGCGCCGGCACGCCGAGCAGCACGGCAGTCGGCTCAAGAGCTTCCGCTGCACGCAGTGCAACAAGAGCTTCGGGAACGAGCTCACCCTAAGGAATCACCTGATAGCGACGAATCACAAGACCACCGTCCACGGACAGGAGTACGATCCGAACAAGAGGATCAAGAGGGTGGCGGCCAAGGCGGCGCAGAGGATCATCGATCAGATCAAGACGGATCTCAGGtcggacgaggaggaggagagggaggaagaggaggaggaggaggaggaggaggtagaTGAGGAGAGGCTGGTGAAGGAGGAGGTGGACGGGGATAAGGAGGAGATGGCGACCTCAACGCCGTCGAGCAAGCGTCACCCCCGCAGCGCCAAGTCCCTGGTCTGCCAGACTTGCAACCATCGATGCCCCACGCGCCAGGCGCTCACCAAGCACATGGAGCAGCACGTCAAGGACGAGGCTGCGGTCAAGAAGACCGAGGTCTTCCTGCGggacgacaacgacaacgacgacgacaacgagaACGGCAACGACGCCGAGGACAACGACGAGGACGATGATTACTACGAGGGGGGCCTGGGCTGGCCGATCGACAGCCACGAGTGTCCCACCTGCAAGAAGAAGTACAGCACGAAGAAGTCCCTGCTGCGGCATCAGCTGCTCCACGAGGAGCCGAACTTCGAGTGCGACATCTGCAATGTCAAGTTCTACAGGAAGGACAAGCTCAAAGCCCACTACGACAAATGCTCCGAGAAGAACCCGGACCAGGTGCGTAAGTGCAATATCTGCGGCGACACCTTCGAGAACAACGAGATCCTCCGTGAGCACAGGGCGAAACACGTGATGGAGGGCATACTGACGGAGGAGGACCTGAGGGAAATCGAGCCGAGGCCCGAGGACAGGAGCGCGGAGAAGGCGACGAGGAAGAGGCGCACGGACATCGTCGGCCTCGAGTGCACCGAGTGCAACAAGCGGTACACCTCCAGGAAGGGACTGCTCAGGCATATACAGGTGCACGAGGGCAAGAAGTACCTCTGCGACATCTGCCCGAAGAAGTTCTACCGGCGCGAGCACCTCAAGATCCACGTGGCCAAGCACAACATGATCAAGCCGTACAAGTGTCCCCGCTGTCCCAAGCGCTTCATCAAGGAGGAGCAGGTCAACAGCCACGTGCAGAAGCACGACCGGCAGTCGACGCGCAAGGTCAACAAGGAGACCGACACCGCCAAGAGATTCCTCTGCGAGATCTGCTCCAAGAGCTTCACGCAGTCGACGACCCTCATAGCGCACCTCAGAGCCCACAATGGCATTAAGCCCTACGTGTGCGAGGTGTGCTCGAGGCCCTTCACCACCAATGCTTATCTCAAGATGCACATGAGGACGCACACGCAGGAGCGGCCCTACATCTGCCAGTACTGCTCGAGGGCTTTCGCCAGGGCTGACACCCTGGCCAATCACCTGACGTCGCACACCGGTGAGGCCAAGTACCACTGCAAATACTGCCCGAAGAACTTCAGGAGGCTGAAGAGTCTGAAGGAGCACGTGTTCATACACACGGGACAGCGGCCCTACGCCTGTCCGACGTGCGACAGGAGGTTCAACAACAACGGCAGCAGGTACGCCCACAGCAAGCGCTGCAAGCAGATCGTCCTCCAGATCGCCCCCTCCGAGATCACAGTCCAGAGCCTCAACGTCGAGCAGGAGATGCAGGAGATGCAGGACATCCAGGACCTCCGCGACCAGCAGGACCAGCAGGACCAAGAAGACCAAGACCAGGaccaacaacagcagcaactgCAACTCCAAGAGCTGCAGGAACACATGCAActacagcaacaacagcagaggATACACCAGGCGCAGCTGATCAAGCCCCAGAGCATCAAGACCATCACGATCGCGAGGCCGGACGGGACTCTGAGCCAGCAGCACGTCATGACCCATCACCAGGAGATCCTCATGCCACTGATACTGCCGGTGACGGTCACCCTGGCGGATGTGGGCGAGGAGGTGATACTGCCCGAGGGCACGAAGATTTTCACGGCGTAG
Protein Sequence: MDATQEVRPPDEDEDDEPREVSIGVPSSSEAEAQQQLEICRVCLLEDGPASMRGLFQEEEDADDSSSSMLSEKAMRLASVKIMPGDGLPSQICCDCSDKLESAYKFKLQVEQADTVLRDRLDLHIKEELFFGDVDVNLTSHKSDVEEIMGESLLLKDHMDLLDVRKIREGDIDSQSQDIEKQIDNVDLEQHEIEKHDAEEMHQQLIQDEQMHIQSNEEVMKIHNEQQIENQESDEQQIQNKESDTQRVQSQEEMQQVLDEQHNQSFETQELQEMMLNEISEQERMQEELNQTQQLAMHEHNYVAEAQPCQFADKNNASNPEEMEQDSKENIEKEPMNEQIDVYGVPQESSPSEAIRRSKRNINLRKAIVDRDSDEENYFENLNLSSRLKKVQSEKSEKIYYMCYLCDRQFLSKDVLKEHMHSHEEVRKTLSLSKKSPEKLLKTPEKSQIEITSPTSSKPPSSGKRPSTCPHCGKEYLYIISFNKHLKQHEREKQEMKVDSMPLEVSFQEDDDILDFHDYGDNPAMDSDSEEEIKKEDDVPVKNESKKHGLMKCNVCEEQFDDTDKLKEHRTKHVVEGILTEQDLQDDIKQFEVPETTPEAPPSTDDATLEPRKPTTGQNLSCPHCPAVYAHKKSLSRHVDSSHRGAKFACKLCHQSFSRKDHLRRHAEQHGSRLKSFRCTQCNKSFGNELTLRNHLIATNHKTTVHGQEYDPNKRIKRVAAKAAQRIIDQIKTDLRSDEEEEREEEEEEEEEEVDEERLVKEEVDGDKEEMATSTPSSKRHPRSAKSLVCQTCNHRCPTRQALTKHMEQHVKDEAAVKKTEVFLRDDNDNDDDNENGNDAEDNDEDDDYYEGGLGWPIDSHECPTCKKKYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDTFENNEILREHRAKHVMEGILTEEDLREIEPRPEDRSAEKATRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCPRCPKRFIKEEQVNSHVQKHDRQSTRKVNKETDTAKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQIVLQIAPSEITVQSLNVEQEMQEMQDIQDLRDQQDQQDQEDQDQDQQQQQLQLQELQEHMQLQQQQQRIHQAQLIKPQSIKTITIARPDGTLSQQHVMTHHQEILMPLILPVTVTLADVGEEVILPEGTKIFTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -