Gpul011372.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gastracanthus pulcherrimus
Gene Symbol
lola
Assembly
GCA_949152435.1
Location
OX424572.1:109104182-109127396[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.00053 0.16 14.9 1.1 1 21 24 44 24 45 0.96
2 25 1.6e-05 0.0046 19.7 2.3 1 23 53 76 53 76 0.98
3 25 0.004 1.2 12.1 0.1 3 23 99 120 97 120 0.97
4 25 0.00021 0.061 16.1 1.3 1 21 249 269 249 270 0.95
5 25 4.3 1.3e+03 2.6 0.3 1 10 278 287 278 290 0.90
6 25 0.0061 1.8 11.5 1.3 1 21 346 366 346 367 0.96
7 25 0.0003 0.087 15.7 1.1 1 21 430 450 430 451 0.96
8 25 0.00038 0.11 15.3 0.8 1 21 558 578 558 579 0.96
9 25 0.00084 0.25 14.2 1.4 3 23 589 610 587 610 0.97
10 25 6e-05 0.018 17.9 1.0 1 21 690 710 690 711 0.95
11 25 0.00013 0.038 16.8 1.3 1 21 792 812 792 813 0.96
12 25 0.00015 0.043 16.6 0.7 1 23 821 844 821 844 0.98
13 25 0.00048 0.14 15.0 1.3 1 21 920 940 920 941 0.95
14 25 0.14 42 7.2 4.2 1 23 949 972 949 972 0.95
15 25 0.0016 0.47 13.4 0.4 2 21 1028 1047 1027 1048 0.94
16 25 0.0032 0.93 12.4 3.9 1 23 1056 1079 1056 1079 0.97
17 25 0.00012 0.035 16.9 2.4 1 21 1159 1179 1159 1180 0.96
18 25 0.00064 0.19 14.6 7.0 1 23 1188 1211 1188 1211 0.98
19 25 0.019 5.7 9.9 0.3 1 21 1297 1317 1297 1318 0.94
20 25 0.00086 0.25 14.2 1.5 1 21 1385 1405 1385 1406 0.96
21 25 0.00032 0.093 15.6 3.2 1 23 1414 1437 1414 1437 0.98
22 25 0.0021 0.62 13.0 0.5 1 21 1512 1532 1512 1533 0.96
23 25 0.0022 0.66 12.9 5.4 3 23 1543 1564 1541 1564 0.96
24 25 0.0027 0.79 12.7 0.2 1 22 1603 1624 1603 1624 0.94
25 25 0.092 27 7.8 0.4 1 23 1635 1658 1635 1658 0.96

Sequence Information

Coding Sequence
ATGCCAGATCCATTGTCGCCGCAATTTATTGACACAGACACCATTCAAGATTCTGCCTCAACAGGTGAATACAAGTGTTCTAAGTGCGGACGCAGTTACAAATATACCCGAGGTTTGTGGCGTCACGCCCGATTTGAGTGCGGACGCAAGCCCGGATTCCAATGCCCGTACTGCACCATGAATTTCAAGCGTCGCTACGATGTATACAGACATATCAGAACGATGCATAAGGGTCGGAAAGAGTTCGCAATTGAGCACGTCCGATTCGAATGTGGACTCGATCCGGGATATGGATGTCCGTATTGTAGCATGAGATTCAAGCAACCTGGTGTTGCCTATAGACATATTAGAACGGTGCATAAGGAGCAGGACGTGTTTGTAATTGAGATGAATCATCAGTCGAGCTTGTCGCGGTCGAAAAGGAAGCGTGCTGTTATAAGTTTAACAGTAGCCTGGGTCGCCACATCCGATTCGAGTGCGGCCACGACCCGGGATTCCGACGCCCGTACTGCAGTGCGACTTTTAAGCGTCAAGATAATGTACATAAACATGTTAAATCGATTCATAAGGGGCACGTCCAACATCGGACAGCTTGACTATTTCTTCACCACTGAAGACTGTAAGCTCGATGCACTTGACATACCAGTTGAATTGCCACATATATCAGTCTCTTCCATAAAAGATAGCCGTGGCTACCCCACAAAAAAACACTATACAAAACAAACCTCTCTGACCGGCAAGCGGCACGAGTGTTCCAAATGTGGACGCAGTTACAAGTTTGTCGGGAACCTGAAACGTCATATCCAATTTGAGTGCAGATGCTTTCCGAGATTTAGATGCCCGTACTGCAATGTAAATTTTCTGCAGCGCAATATCGACCAGCTTGACGACTTATTTACTGTCGAAGACTGCAAGCTCGATCCACTCTATCTACCAGAACCATCGCCACGGAAATCATTTGCCCCCAAAAAAGCCAGACATGGCCGCCTGTTAAAAAAGCATCATGCAAAACCAAGCTCTTTGACCGGTAAACGGCACCAGTGTAGCAGATGTGGACGTAGTTACAAGGAGGGTTACACTCTGACAAGCCACATTCGATTCGAGTGCGGACGCGATCCGGGATTCAGTTGCCCGTACTGCAATGTTGGTCAGCTTTACGCAAAATTCATCGCTGAAGACTGCAATCCCGATCCACTTTACCTACCAGAACTATTGCCACCAAAATCAGAAGTCCCCACAAGACGAAGACGTCGCTGTGCAGAACCATCCCCTGTGGGTGGCATACGCTACGTGTGCTTCAAATGCGGACGCACTTACAAGTTCTCCAAGAGCCTGGCGCAGCACATTCGATATGAGTGCGGGCGCGAGCCGCGATTCGGATATATCGGTGAGTTTGAAGAAGAATTTACCCTCGAAGACTGTAAATCCGATCCGCTCTATGTCCCGCAGCCAGCACTTCTACCATCAGTTGCTCCGCCTCCCAAACGCAAACCTCAACATATCAACCGGCTTGACGACTTGTTTACTGCCGAAGACTGCAAACCCGATCCACTCTACCTGAACCTATCCGCACCATCGACATCAAAATCGGTTGTCTACACTAGATCTGAACATTACCAAAAGATTACTAGCATTGCATGTGCAACAAAATCCCCTTCGACCGGCAATCGCTACATGTGTTCGAAATGTGGACGCACTTATAAATTTTCCAAGGGTCTGTCGCGACACGTGCGACTCGAATGCGGTCGCGAGCCGGGATACGGATGCCCGTACTGCAGTGCGAAATTCAAGCAGAGCACTCACGTATACAGACATGTTAGAACTGTGCATAAGGGGAAACGAACATTCGCGGTTGACTTGGATGATTATTCGAGCTTGAAAAGGATGATTTCAGGTATCTGCCATCTTGACGAAGAATTCATCGCCCAAGACTGGACATCTGACCCACTCTACCTACCAGCTCCATTACCGTCAACCTCGAATGCTCCCGCAAACGCCAGACATCGCAGTCTGTTAGAAAGGATCCTTGACACTCCCGCTAAAGTAGTCGAAGCTAGAGGGGTGCGCCACGAGTGTTCCGGATGCGGACGCAGTTACAAGAACGCCGGGACTCTGCGGCAGCATCTCCGACACGAGTGCGGACGCCAGCCGGGATTCGGATGTCCGTACTGCAGTACTAGTTCCAAGCAGCGCATTTCAGATATCGTGCAGCTCGACGAAGAACTCATCATTGAAGACTGCAAACCCGATCCGCTCTACCTACCAGAACCATCAGCATCGCGATCAAAGGCCCCCTCGAGAGCCAGATATCGCAGTCCGTTAAAAAGAATCCACGTCCCACCTGCTAAGCGAACCGACGTGAGCAACACTCGCTACGAGTGCTCCGGATGCGGACGCAGTTACAAGTTCTCCGGTTGTCTGAGGCGTCACGTGCGACTCGAGTGCGGACGCGCGCCGGGATTCAAGTGTCCGTACTGCAGCACGCCCTACGTGCGGCGCGGTGATGTTTATCGGCATATCAGATCGAGACACAAGGGGAAGAAAGAGTTCGTAATCGAGTTGAATCAGCAGTCGAGCTTGCCGAAGTCGTATGCAAGTCAGCTTGACGACTCATTGGCCGCTGAAGATTGCAAACCCGACCCACTCTATATGCCAGAGTCATCGTCATCAGAAAAAGTCGCACCGAAAACTGCCACACGTCGTCGTAAAAAAATCCGCGTCCCTCGTGCAAAACGAGTCACTTTGACCAACAAAGGCTACGAGTGTTCCAAATGCGGAAGGAGTTACAAGTTAGCCAAGTGCCTGAGACGCCACATCCTATTGGAGTGTGGACGTGACCCGAGATTCCGATGCCCGTACTGCAATGCGAGTTTTAAACATGGCCATATTGTATACAGACACATTAGATCCAAGCATAAGGGGCAGGATCAGTTCGCGATCGATTTGAGTAATCAGTCGAGCTTGTCCAGAGATTTCGACGAGATTGACGTTTCATCCGCCGTCGATCCACTTTACCTACCGGAGCCATCGCCGCCAAAATCAATCGCCCAAAAACGTAGCAAACGTCACCATAAAAAAAACCAATGTTCCAAATGCGGACGGAATTACAAGTCAGTCGAGAGTTTGAGACGTCACGTCCAACTCGAGTGCGGATGCAAGCCGGGATTCAGATGTCCATATTGCGGCTCGAATTGCAAGCGTCGCGATTATGTATATAGGCATATTAGACTGTTCCATAAAGGGCAGGACCAGTTTGCGATCGATTCGAATAATCAGATCATCTTGCCTAGGCCGAGTGGGAATGGAGCTGatttctaTCAAtcgtacgagaaaattattacCGAAGACCACAAACCCGTCCCACATTACCTGCCCGAACCATCGCTACCAAAATCCACCTTCACGAGGACCTGTCGGCGTTCTGCAATACCTCTAGTTATTCTTGCGGAGCGAGCCGCTTTGTCTGGAAAAGAATACGAGTGTTCCAAATGCGGACGTAGTTATAAGAACCTTAAGTGCCTCCAACGCCACGTTCGACTCGAGTGCGGTCGCGAGCCGCGATTTCGTTGCCCGTACTGCAGCACCAGTTTTAAACATAGCCATACTGTATACAGGCACATTAGATCGTTCCACAAGGGTCAGAAGGAGTTTGTGATCGATTTGAATAGTCAGCTGAGCTTACCGACTCTGAATGAGAATGGAACTGataacAGACAGCTTGACGTGCAATTTGTCGCTACAGACTGCAAAGCCGATCCACTCTACCTACCAGAGCCATCGACATCAGAGCAACCATCAACAGAATCAGTCGCTCCCAAGAAAGTCAGACGTCGCCGTAAAAAGTATCACAGCACTTGTGCAAATAGAGCCACTTTGGCTGCCAATCGTCACGAGTGTCTCGATTGCGGACGTAGCTACAATTTTGTCCAGAGCCTGGAAGAGCACATTAATTTTGAGTGCGGACGCGAGGCAATATTTCGATGCCCATACTtACCGCTAACGAGCCCCAGCAGCCCCTACCCGGTCCTGCCGCTCATGAAGAACCTCGCTGCCATGTGGATGGCCAAGCAACgccaacaacaacagcagcagcagcaacagcagcagcagctgcaaaATCAGCAGCAACAATCGCCGCCGGGCGGCTACTCCTATCGCTGCGATGTCTGCGGCAAGGGCTACCAGCACAGAGCCACACTGCTGAGGCACACGCGCCACGAGTGCGGCAAGGAGCCCAAGTTCAAGTGTCCCTACTGTGCCCACAGGACCAAGCAGCGGGGAAACCTCTACCAGCACATACGTACCAATCACCCGGGCAAGACCGTATTCTCGAACACGGTTGAGGtCTTTCAAAGGATTCGCCTGCAAAAGACGCTGACATACCTCCCGGACGCCTCAActgcacagcagcagcagcagcaacagcaacaacagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacatcaGTTGTCGCACAAGAACGTAAACGCGGAGCCCGGACGCTTCACCTGCGATCAGTGCGGTAAGGTCTACCGCTGGTACAGGAACCTGACGACTCACCTGAGACTCGAGTGTGGCAAGGAGCCGAGCGTCCACTGTCCCTACTGTCCGAGGAGGACCAAGCACAAGACCAGCATGCGTTCGCATATGCGCAGGATGCACAACGCTTACACTCTCGTCCCTCGCTGTGCGGACACTCTCACTAATCCTTCCACTCCCTTTGCTCTGTCGAATTTTTCAGAGGCGCCGCTGTTCCCGATCGTCAGGCCGCGCTTGCACATCTGTCCGCGCTGCGGCCAGATGTACTCATGGGCCTCGAATCTGCGCAAACACCTGAAGATGGGCTGCGGTATGGTGACCTGCGAGACCCACTTCTCCTGCCAGTACTGCCCGTATCGCTCGCGCATCGAGGCCAGCTTCATCAAGCACCTGCTTTCGGTACACAACATCAAATAG
Protein Sequence
MPDPLSPQFIDTDTIQDSASTGEYKCSKCGRSYKYTRGLWRHARFECGRKPGFQCPYCTMNFKRRYDVYRHIRTMHKGRKEFAIEHVRFECGLDPGYGCPYCSMRFKQPGVAYRHIRTVHKEQDVFVIEMNHQSSLSRSKRKRAVISLTVAWVATSDSSAATTRDSDARTAVRLLSVKIMYINMLNRFIRGTSNIGQLDYFFTTEDCKLDALDIPVELPHISVSSIKDSRGYPTKKHYTKQTSLTGKRHECSKCGRSYKFVGNLKRHIQFECRCFPRFRCPYCNVNFLQRNIDQLDDLFTVEDCKLDPLYLPEPSPRKSFAPKKARHGRLLKKHHAKPSSLTGKRHQCSRCGRSYKEGYTLTSHIRFECGRDPGFSCPYCNVGQLYAKFIAEDCNPDPLYLPELLPPKSEVPTRRRRRCAEPSPVGGIRYVCFKCGRTYKFSKSLAQHIRYECGREPRFGYIGEFEEEFTLEDCKSDPLYVPQPALLPSVAPPPKRKPQHINRLDDLFTAEDCKPDPLYLNLSAPSTSKSVVYTRSEHYQKITSIACATKSPSTGNRYMCSKCGRTYKFSKGLSRHVRLECGREPGYGCPYCSAKFKQSTHVYRHVRTVHKGKRTFAVDLDDYSSLKRMISGICHLDEEFIAQDWTSDPLYLPAPLPSTSNAPANARHRSLLERILDTPAKVVEARGVRHECSGCGRSYKNAGTLRQHLRHECGRQPGFGCPYCSTSSKQRISDIVQLDEELIIEDCKPDPLYLPEPSASRSKAPSRARYRSPLKRIHVPPAKRTDVSNTRYECSGCGRSYKFSGCLRRHVRLECGRAPGFKCPYCSTPYVRRGDVYRHIRSRHKGKKEFVIELNQQSSLPKSYASQLDDSLAAEDCKPDPLYMPESSSSEKVAPKTATRRRKKIRVPRAKRVTLTNKGYECSKCGRSYKLAKCLRRHILLECGRDPRFRCPYCNASFKHGHIVYRHIRSKHKGQDQFAIDLSNQSSLSRDFDEIDVSSAVDPLYLPEPSPPKSIAQKRSKRHHKKNQCSKCGRNYKSVESLRRHVQLECGCKPGFRCPYCGSNCKRRDYVYRHIRLFHKGQDQFAIDSNNQIILPRPSGNGADFYQSYEKIITEDHKPVPHYLPEPSLPKSTFTRTCRRSAIPLVILAERAALSGKEYECSKCGRSYKNLKCLQRHVRLECGREPRFRCPYCSTSFKHSHTVYRHIRSFHKGQKEFVIDLNSQLSLPTLNENGTDNRQLDVQFVATDCKADPLYLPEPSTSEQPSTESVAPKKVRRRRKKYHSTCANRATLAANRHECLDCGRSYNFVQSLEEHINFECGREAIFRCPYLPLTSPSSPYPVLPLMKNLAAMWMAKQRQQQQQQQQQQQQLQNQQQQSPPGGYSYRCDVCGKGYQHRATLLRHTRHECGKEPKFKCPYCAHRTKQRGNLYQHIRTNHPGKTVFSNTVEVFQRIRLQKTLTYLPDASTAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQLSHKNVNAEPGRFTCDQCGKVYRWYRNLTTHLRLECGKEPSVHCPYCPRRTKHKTSMRSHMRRMHNAYTLVPRCADTLTNPSTPFALSNFSEAPLFPIVRPRLHICPRCGQMYSWASNLRKHLKMGCGMVTCETHFSCQYCPYRSRIEASFIKHLLSVHNIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-