Basic Information

Insect: Gastracanthus pulcherrimus
Gene Symbol: -
Assembly: GCA_949152435.1
Location: OX424574.1:13197185-13200740[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00053 0.15 14.9 6.8 1 23 72 94 72 94 0.97

2 28 0.0095 2.8 10.9 1.0 2 23 102 124 101 124 0.97

3 28 0.0023 0.69 12.8 0.7 1 23 131 154 131 154 0.96

4 28 0.0013 0.37 13.7 1.8 1 23 160 182 160 182 0.94

5 28 0.013 3.8 10.5 0.7 1 23 187 210 187 210 0.95

6 28 0.0054 1.6 11.7 4.1 1 23 227 249 227 249 0.98

7 28 0.0033 0.96 12.4 2.3 2 23 256 278 256 278 0.96

8 28 0.00025 0.073 15.9 0.2 1 23 285 308 285 308 0.97

9 28 0.95 2.8e+02 4.6 2.8 3 23 316 336 314 337 0.94

10 28 0.00038 0.11 15.3 1.5 2 23 343 365 342 365 0.92

11 28 6.9e-05 0.02 17.6 0.2 1 23 372 394 372 394 0.95

12 28 1.6e-06 0.00047 22.8 2.4 1 23 398 420 398 420 0.98

13 28 0.0002 0.059 16.2 0.1 1 23 426 448 426 448 0.98

14 28 0.0006 0.18 14.7 3.1 1 23 454 476 454 477 0.96

15 28 0.0061 1.8 11.5 4.4 1 23 606 628 606 628 0.98

16 28 0.0027 0.8 12.6 0.1 2 23 636 658 635 658 0.95

17 28 0.0022 0.65 12.9 1.9 1 23 665 688 665 688 0.95

18 28 0.00025 0.074 15.9 3.4 1 23 694 716 694 716 0.96

19 28 0.056 16 8.5 2.1 1 20 721 740 721 744 0.93

20 28 0.0031 0.92 12.4 4.2 1 23 761 783 761 783 0.99

21 28 0.0013 0.39 13.6 0.8 2 23 790 812 789 812 0.95

22 28 0.13 38 7.4 1.2 1 23 819 842 819 842 0.90

23 28 3.4 9.9e+02 2.9 6.5 1 23 848 871 848 871 0.93

24 28 0.00038 0.11 15.3 1.5 2 23 877 899 876 899 0.92

25 28 6.9e-05 0.02 17.6 0.2 1 23 906 928 906 928 0.95

26 28 1.6e-06 0.00047 22.8 2.4 1 23 932 954 932 954 0.98

27 28 0.00099 0.29 14.0 0.1 1 23 960 982 960 982 0.96

28 28 0.00052 0.15 14.9 1.8 1 23 988 1011 988 1011 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00053	0.15	14.9	6.8	1	23	72	94	72	94	0.97
2	28	0.0095	2.8	10.9	1.0	2	23	102	124	101	124	0.97
3	28	0.0023	0.69	12.8	0.7	1	23	131	154	131	154	0.96
4	28	0.0013	0.37	13.7	1.8	1	23	160	182	160	182	0.94
5	28	0.013	3.8	10.5	0.7	1	23	187	210	187	210	0.95
6	28	0.0054	1.6	11.7	4.1	1	23	227	249	227	249	0.98
7	28	0.0033	0.96	12.4	2.3	2	23	256	278	256	278	0.96
8	28	0.00025	0.073	15.9	0.2	1	23	285	308	285	308	0.97
9	28	0.95	2.8e+02	4.6	2.8	3	23	316	336	314	337	0.94
10	28	0.00038	0.11	15.3	1.5	2	23	343	365	342	365	0.92
11	28	6.9e-05	0.02	17.6	0.2	1	23	372	394	372	394	0.95
12	28	1.6e-06	0.00047	22.8	2.4	1	23	398	420	398	420	0.98
13	28	0.0002	0.059	16.2	0.1	1	23	426	448	426	448	0.98
14	28	0.0006	0.18	14.7	3.1	1	23	454	476	454	477	0.96
15	28	0.0061	1.8	11.5	4.4	1	23	606	628	606	628	0.98
16	28	0.0027	0.8	12.6	0.1	2	23	636	658	635	658	0.95
17	28	0.0022	0.65	12.9	1.9	1	23	665	688	665	688	0.95
18	28	0.00025	0.074	15.9	3.4	1	23	694	716	694	716	0.96
19	28	0.056	16	8.5	2.1	1	20	721	740	721	744	0.93
20	28	0.0031	0.92	12.4	4.2	1	23	761	783	761	783	0.99
21	28	0.0013	0.39	13.6	0.8	2	23	790	812	789	812	0.95
22	28	0.13	38	7.4	1.2	1	23	819	842	819	842	0.90
23	28	3.4	9.9e+02	2.9	6.5	1	23	848	871	848	871	0.93
24	28	0.00038	0.11	15.3	1.5	2	23	877	899	876	899	0.92
25	28	6.9e-05	0.02	17.6	0.2	1	23	906	928	906	928	0.95
26	28	1.6e-06	0.00047	22.8	2.4	1	23	932	954	932	954	0.98
27	28	0.00099	0.29	14.0	0.1	1	23	960	982	960	982	0.96
28	28	0.00052	0.15	14.9	1.8	1	23	988	1011	988	1011	0.95

Sequence Information

Coding Sequence: ATGAAAGCCAGCGTAATTAAAGGAGCAAAAACAAGAAGAACCCACGGAAAGCGTAAAAAACAGCAAAATCGAGCGACTTCCAAATCAAAAGAATCCATCGTGCAGAGCGAGAATCTCGATGACGACCCTCTGGACTTCAGAATAAAAAAGCTCAAAAAATCAGCGGAACCCCGCGTCAGAACCTGCAAGATCACAAGATCTAAAATACACCGCTTCAACTGCAACGTCTGCCAGCATAAATTTAGCCAAAAAAAATACTACCAGCGCCACATGTCTCGCCACACCGACGAACCTCGGCCCGTGCAGTGCACCATCTGCTCCGCACACTTCAAAACCACCATCGGCCTCTCGACACACCAAAGCACCGTCCACGCGGAGTCGGCTCGACTCTATCCCTGCTCGCAGTGCGACTTCCAGGCGAGAACGCAGAAGAACCTGAAACAACACGTGCTCGTCAAGCACACCGACGACTACTCCTACAGCTGCGAGTACTGCCCGAAGATGTTCAAGATCAGTCCGCATTTCCAGTCCCACGTGACCGACCACGAGTGCGCGCCGTACTTCTGCGACCTCTGCGACAATGTCTACTTCCAGAAGGCCTCGCTTCGCATTCACGTGACGTCGAAGCACGCCGAGCTGCCGAAGGACCCTCGGGATGTGAAATCTCTGAGGCGGTATCACACTTGCGACATATGCCAGGCGACCTTCCACCGAAGCGACTACTTCGCCAGCCACGTCAAGCGCCACGAGGACTCTCGGCCCCCGAGGTGCGACGTCTGCTCGAAACTCTTCAAGAGCGCCAAGAGCCTGGCCCACCACAAGAGATACATCCACGCCGAGTCCACTCGACTCTACCCCTGCGGCCAGTGCGGCTACCAGGCGTCCTCCAAGGGCAATCTGAAGCGACACGCGCTCACCAAGCACACCGACGAATATCGCTTCGGCTGCGAGCAGTGTCCCAGAAGATTCAAGATCGAGGCGCAGTGCAAGGCCCACGCGAGGAGTCACCACGAGACCGGGCCCTGCATCTGCGACGTCTGCGGCAAGGTCTACCCTCACAAGTCCGCGCTCTATACCCACGTCAATGACAAGCACGTCGAGAAGGCGAGGGACTTCCCGTGCGAGGTGTGCAAGAAGCGATTCATGTCTCAGAAGAACCTGGAGGCACACGCGGAGCTGCACAGGATCAAGTACGTATGCGAGCAGTGCGGCCGGGAGTTCAAGTCGAAGATGTACCTGACGAGGCACCAGAAGAAACACACCGGCGAGAGGAATTACCCGTGTCCGATTTGCGGAAAAGGTTTTACGCTGCTGAACTCGCAGCAGCTGCATCAGTTGACGCACATGGGCGAGAGGCCGTATATCTGCGACGAGTGCGGGAACAGCTATACGCAAAGGAAGTCGATGATGATGCATAGGAGGAAGCATCATCCGGAGGTCACGGAGCCGCCGCCGAGGGTCAAGATCGTGGACCTTCTGCAGGGAATGAAGGAGAAGATTGGGGATAAGGGTGGCGGGGAAAAgcaAACTTCATCAGCCGATCCACTTGTCACAGTATGTTTAACTGTAAAGTCAGAAGAGGATCTACGCCTGAAAGCCAGCGTAACCAAAGGATCTCAAATCGGAGCAAGAACAAAAAATATCCGTGGAAAACGTAAAAAACCACAAAAACGAATAACTTCGAAATCAAAAGAGTCCATCGTGGTGAGCGAAAATCTCGACGATGCCCCTCTGGACTTCACAATAAAAAAGCTGAAAAAATCACCGGAACCCCGCGTCAAAACCTACAATATCAGCAGTCCCAAAGTCTACCGTTACAACTGCAAGATTTGCCACCTCAAATTCCTTCGAAACAACCAGTACCAGCGCCACATGGCTCGCCACACCGACAAACGTCCCATCCTCGAGTGCACCATCTGCTCCGCGAACTTCAAAACCGCCGCCGGCCTCTGGTCGCACCGGAAATACGTCCACGCCGACACCGCTCAACTCTATCCCTGCTCGCAGTGCGACTTCCAGGCGAGAACGCAGGATCACCTGAAGCGGCACGTACTCAACAGGCACACCGACGACTACCCCTACAGCTGCGAGTACTGCCCGAAGATGTTCAAGAGCCACACGTACTTCCAGGCCCACGTGACCAATCACGAGTGCGCGCCGTTCTTCTGCGACCTCTGCGACAACGTCTACTTCCACAAGACCTCGCTTCGCATTCACATGCCGTCGAAGCACGCCGAGCTGGCGAAGGGCCCTCGGGATGTCAAGTCCCTGAAGCGCTATTACACCTGTGACCTTTGTCAGGCGTCGTTTCACCGTAGCGATCATTACGCGAGCCACGTGAAGCGCCACAACGATTCGCGGCCCCTGAAGTGCGACGTCTGCTCGAAGCTCTTCAAATCCGCCGTCTACCTCTCGAAGCACACGAAGAACGTCCACGCCGAGTCCATTCAACTCCACCCCTGCGAACAGTGCGACTTCCAGGCCAGATCCAAGGGTAGTCTCAAGAGTCACGTGATCTTCAAGCACACCGATGAGTACCCCTTTAGCTGCGAGCAGTGTCACAGAAAATTCAAGATCGAGTCGCAGCACAAGACCCACGTGAAGAATTACCACGAGACCGGGCCTTGCATCTGCGACGTCTGCGGCAAGGTCTACCCTCACAAGTCCGCGCTTTACACCCACGTCAATGACAAGCACGTCGAGAAGGCGAGGGACTTCCCGTGCGAGGTGTGCAAGAAGCGATTCATGTCTCAGAAGAACCTGGAGGCACACGCGGAGCTGCACAGGATCAAGTACGTATGCGAGCAGTGCGGCCGGGAGTTCAAGTCGAAGATGTACCTGACCAGGCACCAGAAGAAGCACACCGGCGAGAGGAATTACCTGTGTCCGGTGTGCGGGAAAGGTTTTACGCTGCTGGGCTCGCAGCAGGTGCACCTCTTGACGCACGTGGGCGAGAGGCCGTACGTCTGCGACGTGTGCGGGAAGAACTTCACGCAGAGGTCGTCGATGATGTTCCATAGGAAGAGGCAACATCCGGGGATCGAGcagccgccaccgccgccggtTAAGATCGTCGACCTTCTGCACGGAGTGAACGAGAAGATCGGTGATAGGAGTGGCGGGAAAGCGTGA
Protein Sequence: MKASVIKGAKTRRTHGKRKKQQNRATSKSKESIVQSENLDDDPLDFRIKKLKKSAEPRVRTCKITRSKIHRFNCNVCQHKFSQKKYYQRHMSRHTDEPRPVQCTICSAHFKTTIGLSTHQSTVHAESARLYPCSQCDFQARTQKNLKQHVLVKHTDDYSYSCEYCPKMFKISPHFQSHVTDHECAPYFCDLCDNVYFQKASLRIHVTSKHAELPKDPRDVKSLRRYHTCDICQATFHRSDYFASHVKRHEDSRPPRCDVCSKLFKSAKSLAHHKRYIHAESTRLYPCGQCGYQASSKGNLKRHALTKHTDEYRFGCEQCPRRFKIEAQCKAHARSHHETGPCICDVCGKVYPHKSALYTHVNDKHVEKARDFPCEVCKKRFMSQKNLEAHAELHRIKYVCEQCGREFKSKMYLTRHQKKHTGERNYPCPICGKGFTLLNSQQLHQLTHMGERPYICDECGNSYTQRKSMMMHRRKHHPEVTEPPPRVKIVDLLQGMKEKIGDKGGGEKQTSSADPLVTVCLTVKSEEDLRLKASVTKGSQIGARTKNIRGKRKKPQKRITSKSKESIVVSENLDDAPLDFTIKKLKKSPEPRVKTYNISSPKVYRYNCKICHLKFLRNNQYQRHMARHTDKRPILECTICSANFKTAAGLWSHRKYVHADTAQLYPCSQCDFQARTQDHLKRHVLNRHTDDYPYSCEYCPKMFKSHTYFQAHVTNHECAPFFCDLCDNVYFHKTSLRIHMPSKHAELAKGPRDVKSLKRYYTCDLCQASFHRSDHYASHVKRHNDSRPLKCDVCSKLFKSAVYLSKHTKNVHAESIQLHPCEQCDFQARSKGSLKSHVIFKHTDEYPFSCEQCHRKFKIESQHKTHVKNYHETGPCICDVCGKVYPHKSALYTHVNDKHVEKARDFPCEVCKKRFMSQKNLEAHAELHRIKYVCEQCGREFKSKMYLTRHQKKHTGERNYLCPVCGKGFTLLGSQQVHLLTHVGERPYVCDVCGKNFTQRSSMMFHRKRQHPGIEQPPPPPVKIVDLLHGVNEKIGDRSGGKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -