Gpul041830.1
Basic Information
- Insect
- Gastracanthus pulcherrimus
- Gene Symbol
- bab1
- Assembly
- GCA_949152435.1
- Location
- OX424574.1:27695309-27697825[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-10 1e-06 30.7 0.1 1 38 320 358 320 362 0.93
Sequence Information
- Coding Sequence
- ATGAAAAACTCAGCGCAGCAATACTGTTTGCGTTGGAACAACCACACTACCAACTTTGTCACAGTACTTGATCAACTGTTCAAATCTGAAGCTTTTACCGATGTCACTTTGGCGGTGCAGGATGGAACTTCAATCAAGTGCCATAAAATGGTACTCGCTGCTTGCTCCACATACTTTCAAGATCTTTTCATCAAAAATCCTTGTGAACATCCTATCATCATTCTCAGTGAGGTGAAGTACTGCGAAATCAAGGCGATCCTCGATTACATGTACAAGGGTGAAGTGCATGTAGCTCAGGACCAACTTGATAGATTACTGAAAGTTGCTGAATTTCTAAAGGTGAAAGGATTACTTGCAGAAGACACTGAACCAAACAAAAGAGAAGAAACAGATTCTGTAATGTCTCCTCCACCAGCCATCAGTACAAGCACAAGCAGCATAGCTCACAGCAGTGGATATGTATCCCCACCTCACATCCCCTCCTCATCCTTCATGCCTTATGGAAAATCACCCATCGAAAGAAATCACAATCACTTGTGGGCTGCTGCTTTCGCAGGAGTGCTTCCCATACCTCAGCAAGCCATATCCGGTCATCAACCTCCACCACGCAGTCAGCGTTCCATTCTTGGCAGCTCCTACGAGAACTCCTCTGAAACTTCTCCTCTCAGCAGAAAAAAGCTCTCCGCTTTGATGGCAAATCGAGACACTCCAATCTTGAGAAACGTTCTGGGTCAAGGGCAGGCTGATAGCTCACAGGGATTATCCGCTGCACACCAGGACAGACCAGAGACATCTTTCTGCTCAAACAGCAATGGCTCAGCTCAAGACTCAGACAGACGAAATAGCGCTGAACTCTCTGAATCCATGATGGATGAAGATGAGAAACCGATGTCACCACAGTTTCCAAATGGAGCCAAACCAGGTGCAAAGCCCGAATGGAAGCGCTACAAGCAGTACACCCGCGAGAACATAATGGACGCCATGTCCGCGGTCCGCAAGAAGGAGATGTCCGCCCTGCAGGCCGCGCGCCGCTACAACGTGCCCTCCCGCACCCTCTACGACAAGCTGAAGAAGGCCGGCATCCTGCCGTCCCGCAGCGCGGGCATCCAGCGCCAGCGCGACCAGGCCGCGGGCAGCGCCCGCTTCCCCTACGCCCCGAACGTCAACGGCAACGTCTACGGCTCGAACCGCCATCGccaccagcagcagcatcagAACGGCGGGGCCTGCAGTAGCGCCCTGtccgagagcgagagcgagaccAACGGCATGGCCGGCAACGGGAGCATGAGCGAGAGCTCCCACCACGGCATGCCGAGCAGTAGCCGCGCGGGTGGCCACAGCAGCGGAACCGTCGACGACGTCGTCATGGACATGTCCACGAGGAGTCCGAGTCCcggagcggcggcggcggtgatGGCCGCCATGATGGCCCACCGAGCCTCGGTCAGCCAGTTCAGCGAGGACCAGGTGGAGGATCTGTCGGTGGGCGGGAGGTCGAGCCACTCGCACGCCTCGGCCACCGTCACGTCCGCCGACGTCAGGATGATGAACGCGAAGGCGGAGGACGATCtggacgacgaggacgacgacgaggacagGGTTTGA
- Protein Sequence
- MKNSAQQYCLRWNNHTTNFVTVLDQLFKSEAFTDVTLAVQDGTSIKCHKMVLAACSTYFQDLFIKNPCEHPIIILSEVKYCEIKAILDYMYKGEVHVAQDQLDRLLKVAEFLKVKGLLAEDTEPNKREETDSVMSPPPAISTSTSSIAHSSGYVSPPHIPSSSFMPYGKSPIERNHNHLWAAAFAGVLPIPQQAISGHQPPPRSQRSILGSSYENSSETSPLSRKKLSALMANRDTPILRNVLGQGQADSSQGLSAAHQDRPETSFCSNSNGSAQDSDRRNSAELSESMMDEDEKPMSPQFPNGAKPGAKPEWKRYKQYTRENIMDAMSAVRKKEMSALQAARRYNVPSRTLYDKLKKAGILPSRSAGIQRQRDQAAGSARFPYAPNVNGNVYGSNRHRHQQQHQNGGACSSALSESESETNGMAGNGSMSESSHHGMPSSSRAGGHSSGTVDDVVMDMSTRSPSPGAAAAVMAAMMAHRASVSQFSEDQVEDLSVGGRSSHSHASATVTSADVRMMNAKAEDDLDDEDDDEDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00739174;
- 90% Identity
- iTF_00739174;
- 80% Identity
- iTF_00739174;