Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_949152435.1
Location
OX424572.1:68447739-68486211[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-17 8.5e-14 53.4 0.1 1 45 563 608 563 608 0.96
2 2 5e-18 1.6e-14 55.7 0.0 1 43 1058 1101 1058 1103 0.94

Sequence Information

Coding Sequence
ATGCGTCATGGCGCGCACGTGCGGCGTTATGGAGTCTATGATAAGCCTAGCCCCGACAATTTGGCCTCGCGCTTGCGCATGCAACAAAAAGAAACCGCTGAAACGCTATTATCTTGCGGTGGTGTTGCAGGTCTGGAGCGGGTCGCGGAGGAGTTGATGGGCCGTAGGAGATGGAAGCAATATCAGGACACCCTGTACAGCGGCACTCGCAGCACGGACAACGCGTCGACGGCGGCGAGCCAACATCACCAGCAGCAGCTTCAACTGCAGCTTCAGCAGCTGGCGCAGGTGCAGCAGGCGAAGCCCGCGGACTCGCCGAGCCAGTCGCTGAAGGCGAGCCTAGcgaaccagcagcagcagcagcagcagcagcagcagcgcgccgCCGCCACGACAAACTGCACGTCCGGCGCTGGCGAGGCACAGCAGCCGCAGCTTCGCTCGCCTCGGCGCGCCGACGAGACGGGCGCCGGCCCGCCGGAGAACGGCCGGCTGCTGTGCGGCACCCGGGAGAACGGCCAGCCGCCGGAGAACGGGCCGGACGCCGCTGCCGAGGAGCAGCCGCTGCCCCTCGAGGACGCTGCCGCAGCCGCGGCCGAGAAGAACGGGGCCGCCAGGGAGCCACCCACGACGACGACCAAGGGCCTGGAGGAGAACAACGGCGAGCTGTTGGGCCTAGAgggcgaggaggaggaggagggggaCACGGCCGCGCAGAGGATCAAAAGGGAACGACTCGACGAGAGGATAAGGCTGAGCCCGCTCAGGGGGGAGGACCAGAACCAGCCGGACGGACGCCAGGATCGCCCGGACAAGACCAACGACACGGAAGGGACCAAGGAAGTGAAAGAGGAAACGGGCTTGGAACGGCCCCAAGTGACGAAGGGCCTGCTGAGGGTAAAGAAGGAGGAGGAGCTGCAGGAGACGCCGGGCCCCGGTGGCGGTGGCCTACACTGCCCGGTCAGGCCCACGTCCACGCCGCTCatcagcaacaacaacaacaacaacgggGCTGCCAACAGTGCCGAAGCAagtgcagcggcagcggcggcgatAGCGCGCAGCGCCTCGACGCCACCCAAGAAGGAGGTGATATTCTGCACGCCTACGTTCTTGCTGGGCCGACGGCCGAGTCCGCCACCCGAGGACTGGAAGCCGCTCGACAAGTGCTACTTCTGTCTCGATGGCAAGCTGCCACACGACGAGCAGCCGCCTCTTAGTCCGCAAAGCGACAGCAGCCAGAGCTCCCGCTCGGCGGAATCGCCCATGTCCGTGCAGGTCGACCCGATGGCGGCATCGGTCGTCGCGGCCGCCCTCAGCGGCACCTATCCGACCCTGCTGCCCCAGTGGTGCCTGCCGCCAAGAGAGCCGCCCCACGTCGTCGCCGCGGCCGCCGCGGCCGCCGCTGCGGCAGCGGCTGCAGCGGCCCAGCACCAGCACCATCACCAGGAGAACGCAGGCGCCGATCAGCCGCTCGACCTCTCCGCCAAGCCCAAAAACTCTCAGGACAACAACATATCTATACTGGAACAACAAAAGATACCTCTACGAATGTCAGCAGCCATCGAtcagaaaactatttttaaCAGCACGTGCTACCGGGCGAAGCCGCGGGTGACGGGCGTCTCGGCCAGTGGCTCGCCCCTGGTGGGCACTGGCGGCGGCGCCGGTGGCCGGCGCACCTACACCGAGGACGAGCTCCAGGCTGCCCTGCGCGACATCCAGAGCGGCAAACTGGGAACCCGACGGGCCGCCGTCCTCTACGGCATACCGCGCAGCACGCTGCGCAACAAGGTCTACAAGCTAGCGATGGAGCGCGAGAGGGACGCGTCCCTCTCGGCCAGCGCCAATGCGGCCGCCAATCCCGCCACTCAGtcacaacagcaacaacaacaacaacaacaacaacaacaacaacaacacaaCGAGGTGGGGGCGACGGCTGGGGCCAATAGCAATGCGCAGCAGGGCGCGGCCGCCGCGGCGAGGGCAGCAGCGGCGCAggaagcggcggcggcggcggcgacggccaTGGCCACCAGCATCGCCACCATCGCGACAacaaccaccaccaccaccaccatcaccacaCCAAATACCAACCGACAAAACGCCTCCGCGACCACTCCGCTCCCGCAAGTGGACGAGGCGGACGACAAGGAGCTGTCGGGCgcggaggaggagaaggaggtgGAGAAGGCCCTGCTGAAGCCGCTGCTCTCGCTCGAGGACCTCGTGAGGTTCTCCAGCCTGGAGGGCAGCGGCGGCGAGTCGCTCAGGCAGCTGCTGCAGCGTGGCCAGGATCACGCCGGCAACGCCGCCACGCCAGCCGAGTGGTCGGCCTTCGAGCACGCCAACATCGGCCCCTACATACAGAAGATGCTAGCTGCCGCGGCGCCCTTCAAAGGAATGGAGTCGCAAGACTACAGGATCCCGGAAGTTATGCGTCGGCTGATGTGCGAAGACAAAAAGCTCAGTAAAGACGTTAACATTAACGGCGATCAGGTACAGCACATTCATCATGCTTTGTTGCAGCATCGTCTCCCTCagTCTGGTCAGCGCGCGCCGATGACGAACGACGACTTCAATCCGGCGATCGAGGAGGAGGCGAGCGACAGCGGCCAGGGCCGGCCAATCCTCAAGATTCCGTCCTACAAGCCGGCGAGCAGCACGCCGGGCCCGAGCAAGAACGGCCCCGACGGGCCCAACTCCGCCGCGGCCACGGCCTTCGCCCAGAGCTtcgccgcggcggcggcggcggcggccaaCGCGGTGGCGGGCAGTCCGGGACTGCTGGAGCGCGCGAGCCCGGCCTTCTCGGGCACGAGCTCGCCGACCAACTCGCTCGTCGGCAAGGGCATGGCCGTCAACTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAGGAGGGACAGCAGCCCGGCGGTCTGTCCGGTCAAGGCGGCCAGTCGGGCCAATCGATGATCACCGAGCCGAATCCGTACAAGCGCGGCCGCTACACGCCACCGCATCAGCACTCGCAGAGCTCCGGCGGCGGCCAGTCCCAGCAGCACCAGTCCAAGTCCGCGGCCCAGGCCCAGAGcaaggagcagcagcagcagcagaacaAGTCCGGCACCGGTGGCAAAGGCACGAGGCCGAAGCGCGGCAAGTATCGCAACTATGACCGGGATAGTCTCGTCGAGGCGGTCAGGGCCGTGCAGCGGGGCGAGATGAGCGTGCACAGGGCAGGAAGCTACTACGGCGTGCCGCACTCCACCCTCGAGTACAAAGTCAAGGAGCGCCATCTCATGAGGCCGAGGAAGAGGGATCAAAAGCAGCCGGACGACAAGGCCAAGGAGCCGACGTCGGCGGGCGTcggtggcggtggcggcggcggcggtggcgcgtCGGCCCTGCGCACTACGTCGACCCCGAACGCGACGcccggcggcggcggtggcggcggcgtcGGCGACAAGAAGCCCCTGCTCAAGGCCCAGAAGCCGTTCGCGCCAGCGGGGCCGGGCAGCGGGCCCGGCGGCGGACCGGGCATGCCCGGCGGGCCCAACGGCCTGAAGATGCCGGCCTTCATGGACGGCATGCCGCCCCTGCCCTTCGGCCATCCGTTCAACTTCTGGGGCCCGACGCCCTTCATGACCTCGCCCTTCATGCCGGGCGGGCCCAACGTGCCGGGCATCCTGCCGGAACAGTACTTCGCCTCGCAGCGCATGCGCGGCCTGCAGGAGCACCAACGCAACGCCATcgtccagcagcagcagcagcagcagcagcaacagcgcgACGGCGCGCCAGCCGAACAGCCAGGCACGTCGAATCCTCGCGGCAGCTCGCTGATAAAGTCGCCGCGCGAGATGGCCGAGTCGCTGTACGACGGCACGGCGGCGAACGGCAGCTTCCTCGACAACCTGATAAGGTCTAGCCTAGAATCCGGCATCCCGCGCGAGCGCGCCATCGCCGAGGCGCAGCGCAGCAACGCCGCGGCCGCggccgccgcagccgccgccgccgcggccaGCCAGCAGCATCAGCCCGAGAACCTCGGAAGCAGCAAAGTCCTGATAGACCAGCTGTGCAGGAACTCGAGGCGCACGCCGCTGCCGCGCGCCATGCAACAGGACAGCAGCGAGGACGAGGCGCCGAGCTACAATAGGTCGTCGAGGCCCCTGCTCGAGAGGCCGGAGCGCGTGCCGACCGTCGATCTGAGCCCCTCGCCCTCGGAGCGTGCGGCCAGAGCTGCCGGTGCCGGTGGCGGCGGCTGCATCACGGACGAGGGCAGCGATCGAGGACTGGCCTCGCCGCCCACGCCGCTCTCGCTCTCGAGGCTCAGCGGCTCGGGCAGGGAGGACGAGACCACCCGGGACTCGAGGAGTAGCCGAGAGCGCGAGGTACACAATGGAGGCGGCAGCGAGAAAAGCACGGAGGATCGCCAGGACTCCAACAACAAGAAGCTGAACCACTACCCGGACATACACAACCTCTACGCCGTGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAgactcagcagcagcagcagcaacccaAGGATTTCGCGAGCGCAGCGGCTGGTGACCTGGTGGTGCAGCTGCAGCACGgctacaacaacaacaacactaCAAACTCGACGGCTGCAACCGGCAGCAATGGCCGCCCGGTCACCCCGAACaacctgcagcagcagcagcaacagcaatcgtcgtcgtcgttgtcgtcgccGCACGACGAGGACCGTTCATCAGCAGCCTCGCAGGAGCGAGAGTCCGCCTCGCTGAGTCCTCCCGCGCAGCCAGCGGCGATGGAAGAAACGGTAGAGCAGTAG
Protein Sequence
MRHGAHVRRYGVYDKPSPDNLASRLRMQQKETAETLLSCGGVAGLERVAEELMGRRRWKQYQDTLYSGTRSTDNASTAASQHHQQQLQLQLQQLAQVQQAKPADSPSQSLKASLANQQQQQQQQQQRAAATTNCTSGAGEAQQPQLRSPRRADETGAGPPENGRLLCGTRENGQPPENGPDAAAEEQPLPLEDAAAAAAEKNGAAREPPTTTTKGLEENNGELLGLEGEEEEEGDTAAQRIKRERLDERIRLSPLRGEDQNQPDGRQDRPDKTNDTEGTKEVKEETGLERPQVTKGLLRVKKEEELQETPGPGGGGLHCPVRPTSTPLISNNNNNNGAANSAEASAAAAAAIARSASTPPKKEVIFCTPTFLLGRRPSPPPEDWKPLDKCYFCLDGKLPHDEQPPLSPQSDSSQSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREPPHVVAAAAAAAAAAAAAAAQHQHHHQENAGADQPLDLSAKPKNSQDNNISILEQQKIPLRMSAAIDQKTIFNSTCYRAKPRVTGVSASGSPLVGTGGGAGGRRTYTEDELQAALRDIQSGKLGTRRAAVLYGIPRSTLRNKVYKLAMERERDASLSASANAAANPATQSQQQQQQQQQQQQQQHNEVGATAGANSNAQQGAAAAARAAAAQEAAAAAATAMATSIATIATTTTTTTTITTPNTNRQNASATTPLPQVDEADDKELSGAEEEKEVEKALLKPLLSLEDLVRFSSLEGSGGESLRQLLQRGQDHAGNAATPAEWSAFEHANIGPYIQKMLAAAAPFKGMESQDYRIPEVMRRLMCEDKKLSKDVNINGDQVQHIHHALLQHRLPQSGQRAPMTNDDFNPAIEEEASDSGQGRPILKIPSYKPASSTPGPSKNGPDGPNSAAATAFAQSFAAAAAAAANAVAGSPGLLERASPAFSGTSSPTNSLVGKGMAVNFRDVIAKSISVKFQEGQQPGGLSGQGGQSGQSMITEPNPYKRGRYTPPHQHSQSSGGGQSQQHQSKSAAQAQSKEQQQQQNKSGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKEPTSAGVGGGGGGGGGASALRTTSTPNATPGGGGGGGVGDKKPLLKAQKPFAPAGPGSGPGGGPGMPGGPNGLKMPAFMDGMPPLPFGHPFNFWGPTPFMTSPFMPGGPNVPGILPEQYFASQRMRGLQEHQRNAIVQQQQQQQQQQRDGAPAEQPGTSNPRGSSLIKSPREMAESLYDGTAANGSFLDNLIRSSLESGIPRERAIAEAQRSNAAAAAAAAAAAAASQQHQPENLGSSKVLIDQLCRNSRRTPLPRAMQQDSSEDEAPSYNRSSRPLLERPERVPTVDLSPSPSERAARAAGAGGGGCITDEGSDRGLASPPTPLSLSRLSGSGREDETTRDSRSSREREVHNGGGSEKSTEDRQDSNNKKLNHYPDIHNLYAVSTDKKSACDSKLIVDHSSQKTQQQQQQPKDFASAAAGDLVVQLQHGYNNNNTTNSTAATGSNGRPVTPNNLQQQQQQQSSSSLSSPHDEDRSSAASQERESASLSPPAQPAAMEETVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-