Basic Information

Gene Symbol
ct
Assembly
GCA_949152435.1
Location
OX424574.1:185754424-185768204[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-27 2.9e-23 84.0 0.0 2 72 419 490 418 495 0.95
2 3 2.9e-32 7.3e-28 98.8 0.0 3 77 840 915 838 917 0.96
3 3 1.1e-30 2.8e-26 93.7 0.0 3 75 1116 1189 1114 1193 0.95

Sequence Information

Coding Sequence
ATGCACGAGCCCGAGagaagagcgcgcgcgcgcgacacgtACATCAGTCAGTTGATGGAGGAGGTGTCGAGGTTGCAGATGAGCCTGCAGCGCCTCCAGGAGACGAGCGCCCAAGCGACAGCGCGGTTCGAGGAGGAGCTCGAGGCACGCCGACAGCACATCAGTCGACTGGAGAGCAAGCTCGACCGGCAGAAGGACTACGACGAGCTCAAGCGTGAGATCAGCGTGCTCAGGTCCGTGGACCTCTCGCAGATACCGACCGGCGAGCCCGGAAAGAGCCTCGAGCAAGTGCTAATCGAGCGCTCCAAGGCTCTGCAGCAGGCGGAGACGCTCAAACCACCCAGCACACCCGATGCTCTTGGTGGACTCTCGTCACCCCTGCAGCGGGCCGCGACCGCTTCGCCCCACGGTGCGATGATCGCGCCTCCCTCCTCCTCCCTCGTGTCCTCGCAGCCGAGCCGCTCCACCCCCACGCCCTGCTCGGTCGCAACCTCGACGTCCTCCTCCCTCCTCTTGCCCCCGCCCCTGCAAAACGTCGAAACCTTCGGCTCGTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGATCCCTGGAGAGGTCCTTCATgagtcagcagcagcagcagcagcagcagcatcagcagcagcagcagcagcatcagcagcagcagcaacagcaacagcaacagcaaccgGCTCCCACGGGCGCTAGTCTAAACCACCTTCCGTCGCCAACAGATCCGATCTCGAGCTCGAGCACGCCGGCCAAGTCCAGCACCCCCCTGGGCATCGGGCAGCAGGCGCTCGGCGAGCCGGCCGAGAAGGCGACGACGCCGGCCTCCGGGCACGAGACCCCGGCGCCGCCCACGCCCTCCTCCACGACGACGCTGACCTCGGCGGCGATCCTCCAGCCGGCCACGACGAGCGTCGGCCTCGTCGACTCGCTGCACACGCTCTCGCCGATGAACAACGGGCCCCCGCCGGCCAAGAGCCCCGCCGACGAGGCCGCCTgccacaacaacaacaacaacagccaGCACCTGGCCAACAACAACATCGGCGGCAGCCTCGGCGTCCTCGAGAGCCTCAAGAGCCCCTTCCGCTTCGACGAGCGCTCGCACCCCTTTCGGTTCGGCGACGAGTTCGGGGCGGCCGGCATGGCGGGCAGGCTCGGCGAGTCCCTCATACCCAAGGGCGACCCCATGGAGGCCCGCCTCCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCTCGCAGAACCTCGACACCCTGCACATCGCCAGGCGGGTGCGCGAGCTACTCTCCATACACAATATCGGCCAGCGGCTCTTCGCCAAGTACGTGCTGGGCCTGAGCCAGGGCACGGTCAGCGAGCTGCTCAGCAAGCCCAAGCCCTGGGACAAGCTCACCGAGAAGGGCCGCGACAGCTATCGGAAAATGCACGGCTGGGCCTGCGACGACAACGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGGCCTCGTTCGCGCGCGGCCCCCAGGAGGCCGGCGgcggcaacagcaacagcaacagcggCGTCGGGCCGGCGCCCAGCGCCGCCCAGGACCTGAGCGAGGAGCGCATCGCCCACATGCTCTCCGAGTCCGGGCACATGCAGCTCAGCAGGCAGAGCGAGGCCGACACGTCCAACGACGCCGACAGCAAGAGCCCGAGCCGGCTCAACTGCCCGAGCCCCTTCGGCAAGGACCGCAGCATGGACAGCCAGAATCGCCGGCTCAAGAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTGGCCAGGATCTACCAGGAGGAGCTCGCCAAGATCATGGGCCGGAGAGTCGACGACATGCGCGGACCCCGAGACTTCCCCACGAGCGCGATGTTTCCGCACTTTTTCAGCGGGCAGAACCTGCAGGGCATGGAGCGCACGCAGGAGGAGATCCGCATGGCCCTCGACGCGTACCACCGCGAGCTGCAGAAGCTGAACGTGGCCCAGGGCCTGCCCTACCCGCCGCAGATCTCCGGGCTGCTGGCGCTGCAGCAGCACGCGATCCAGCAGCACCACCTGGCGACGAACGGGGGCGCCGGAGCCGACCTCAGCCTCGGCAACATCCTCAGGAGCAAGATGATCAACGGCGTCAgcgaggaggagaaggagaagatGGAGGAGGCCATGAGGCACGCGGGCAGCGCCTTCTCCCTGGTGAAGCCGAAGCAGGAGGCCGGCCCGACCCAGGCCCAGTCGACGCCCGGCGGCTCGAGCGCCAGCTCGCCCCTCGGCAACTCGATCCTACCCCCCACGATGACCCCGAGCGAGGAGTTCGCCGGCGCGGCCACGGCCAGCCCGCTCCAGCGCATGGCCTCCATCACCAACAGCCTCATCAGTCAACCGTCCACGCCGACCCACCACTCGGCCAACCAGCGCCCGCTCAAGGCCGTCCTCCCCCCCATCACCCAGCAGCAGTTCGACATCTACAACAATCTCAACACAGAAGACATTGTCAAGAGGGTAAAGGAGCAGCTTTCTCAGTACTCCATATCCCAACGGCTGTTTGGCGAATCCGTCCTGGGCCTGTCCCAGGGCTCGGTGTCGGATCTCCTGGCCCGGCCCAAGCCCTGGCATATGCTTACGCAGAAAGGCCGCGAGCCCTTTATCCGTATGAAGATGTTCCTCGAGGATGACAACGCCGTGCACAAGCTGGTAGCTAGCCAGTACAAGATCGCACCGGAAAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGTGGCACGCCGATGAAACCAATGCCACCGACGAAGCTCGTACAAGAGCAATTGCAGAACGCAGCCAAAGCTCAGGCAGCCGtgcaagcagcagcagcggcagcggctcAGGCGGCGGCGGCCGCCCAGCACCAACAGGAGAGCCAACTGCAGCTCGGCCCACCTCAGCAGAGTCCGCAGCATCCGGCGCATTCGCAGCCGTCGCCGATGATGCTGACTCCGCCTGGGCCAATTCTCCCGCACGTTCAGCTCAGCATGCAAGAGCTgcagaagaagcagcagcagcagcagcagcagcagcagcagcagcagcaacaacagcagcaacagcaacaacagcatcagcatcaccaccaccagcagcagcagcaacagcagcagcagcagcagcagcagcagcagcagctccagCAGGGTCCGGTACAGATAAACCTGCACTCGCCGCATCACCAAATGTCGCCTCTGCGCGCGCTTCACCCCCACATCTCGCCGAGCGTGTACGAGATGGCGGCCCTGACCCAGGACCTGGACACGCAAACGATCACGACGAAGATCAAGGAGGCGCTGCTGGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCGGTGCTGGGCCTGTCGCAGGGCTCGGTGAGCGAGCTGCTGAGCAAGCCCAAGCCCTGGCACATGCTGAGCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTCTGGCTCTCGGACGCGCACAACGTCGACAGACTGCAGGCCCTGAAGAACGAGCGGCGCGAGGCGAACAAGAAGCGGCGCAGCAGCGGCCCCGGCCACGACAACAGCTCCGACACCTCGAGCAACGACACGGCCGAGTTCTACCACGCGGCCTCGCCCGGGCCCGGGCCCGGCTCCGGCCCCACCTCCGCCAAGAAGCAGCGCGTCCTCTTCAGCGAGGAGCAGAAGGAGGCGCTGCGGCTGGCCTTCGCCCTGGACCCCTACCCGAACGTCGCGACGATCGAGTTCCTGGCGAGCGAGCTCGGCCTCTCCTCGCGCACCATCACCAACTGGTTCCACAACCACCGCATGAGACTGAAGCAGCAGCCGGCGCACGAGGCCCAGTCGCCGGCGACGAACCGCGAGCCCGGCCAGCCCTTCGACCCCGTGCAGTTCCGGCTGCTCCTCAACCAAAGACTGCTCGACATCCAGAAGGAGCGGCTGGGCCTGGCCAGCGTGCCCGCGCTCGGCTACCCGCCCTACTTCAACCCGAACCTCGCGGCCCTGGTGGGCAGCGCCCTCAAGGAGCAGTGCTCCGGCCTCGACCTGTCGATGGGCTCGCTCAAGCGCGAGCCCCACCAGGAGTTCGAGGACGAGGACGGGGACGGGGACGCGGACGGGGACGACGCCATGAGCAACCTCGGCAGCGAGGACTCGGAGGGCTCCGCCGCGAGCGTAAAGCGCGAGCCGACCGAGGCCCCGACGCCGGCCAACACCTCGAGGTCCAGCCGGCGGAAGCCCGCCGCGCCCCAGTGGGTCAACCCCGAGTGGCAGGAGCCGCCGGCGAGCGGCAGGACCGGCGACGAGGTCATCATCAACGGCGTCTGCGTCATGCAGACCAGCGAGGACTACGGCGCGAAGCGCGAGACCGAGGAGACGGTCCGGGTGGAGCCGACGCCGGTGCAGGACCTGCtccagcaccagcaccagcaccagcaccagcaggCCCGCTACGAGGAGGACGCGCAGAGCGACGACGCCTCCTCGGTCTCGGCGGCCAACGCGCCCGAGCCCGAGAGCCCCTCGGCCAAGTCCGCGCGCAACAGCCCGGCCGCCTCGCCCAGGCCGTCCTCGGCGACCGGCTGCGCGCccgcggccgccgccgccgcagccgccgcagccgccgccgccccGCAGCCCGACGAGGCCGGCAGCCCGAAGGACCTGGTCAAGAGCGAGCCGCCCGAGGAGGCCTGGGACTactag
Protein Sequence
MHEPERRARARDTYISQLMEEVSRLQMSLQRLQETSAQATARFEEELEARRQHISRLESKLDRQKDYDELKREISVLRSVDLSQIPTGEPGKSLEQVLIERSKALQQAETLKPPSTPDALGGLSSPLQRAATASPHGAMIAPPSSSLVSSQPSRSTPTPCSVATSTSSSLLLPPPLQNVETFGSFLGEEIVANWRRSLERSFMSQQQQQQQQHQQQQQQHQQQQQQQQQQQPAPTGASLNHLPSPTDPISSSSTPAKSSTPLGIGQQALGEPAEKATTPASGHETPAPPTPSSTTTLTSAAILQPATTSVGLVDSLHTLSPMNNGPPPAKSPADEAACHNNNNNSQHLANNNIGGSLGVLESLKSPFRFDERSHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMASFARGPQEAGGGNSNSNSGVGPAPSAAQDLSEERIAHMLSESGHMQLSRQSEADTSNDADSKSPSRLNCPSPFGKDRSMDSQNRRLKKYENDDIPQEKVARIYQEELAKIMGRRVDDMRGPRDFPTSAMFPHFFSGQNLQGMERTQEEIRMALDAYHRELQKLNVAQGLPYPPQISGLLALQQHAIQQHHLATNGGAGADLSLGNILRSKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEAGPTQAQSTPGGSSASSPLGNSILPPTMTPSEEFAGAATASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDIYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAVQAAAAAAAQAAAAAQHQQESQLQLGPPQQSPQHPAHSQPSPMMLTPPGPILPHVQLSMQELQKKQQQQQQQQQQQQQQQQQQQQQHQHHHHQQQQQQQQQQQQQQQQLQQGPVQINLHSPHHQMSPLRALHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKKRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPGSGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQPAHEAQSPATNREPGQPFDPVQFRLLLNQRLLDIQKERLGLASVPALGYPPYFNPNLAALVGSALKEQCSGLDLSMGSLKREPHQEFEDEDGDGDADGDDAMSNLGSEDSEGSAASVKREPTEAPTPANTSRSSRRKPAAPQWVNPEWQEPPASGRTGDEVIINGVCVMQTSEDYGAKRETEETVRVEPTPVQDLLQHQHQHQHQQARYEEDAQSDDASSVSAANAPEPESPSAKSARNSPAASPRPSSATGCAPAAAAAAAAAAAAAPQPDEAGSPKDLVKSEPPEEAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309398;
90% Identity
iTF_00738953;
80% Identity
iTF_00738953;