Basic Information

Gene Symbol
JARID2
Assembly
GCA_949152435.1
Location
OX424572.1:191935690-191956377[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-22 1.5e-18 69.3 0.0 6 89 1624 1705 1620 1705 0.94

Sequence Information

Coding Sequence
ATGGTTCTAAGCCGAAATGACAAGAGAAAAAGGAAAGAAGGAGACCTTGTGGATCTCATGGATCCACTCGCAGAGGCTCCAAAAAGaacCAAAATACACGCACAAAGAAAGTTTGCTCAAGGAGCAGCGACTCCTGTGTTCAGCCCTGCGAGCACACCAATTAAAGAGAAGGAAAAAGCAAAGCCTGCTGTATTCACAGAGTTAATAACGCACAAACGACCCAATACAGAAGACTTTTTGACATTTCTTTGCTTTCGAGGCACGTCGATCCTACCCCCAAGCCTGAACTTCTTCAGCGCCAGCTCGAAAAAGGACAAGCATGCTCACCAGCCACAGAACGCGCTCAAGCCGCCGGGCTCGAGCCTCTTCTCCAAGGCCAACGGCACGTGCGGCAAGCCCTCGTCGGCCGAGCACCAAGCATCACCCGCGAGCAATCAAAAGCCCTCGACGACTAGAGAAAAGGCCACCAATGGCCCCAAGAAGCCTACTGCTGCTGCCACACCGACAGCTGCCGCACCCAAGACGATGAAGCAGAAGACGACGAGCACCGCGATACAGGCGCTCAAGAGGAAGTACCAGGAGCAGCGGCTGGCCAAACAGAGGCTGAAGAAGAAGTTCAAGCCGACGAGCATGAAGACGCGCTCGGGGGCCGGAGGCGCGACGAGCGAGGTGGCGCCGAGCGAACGGGGACAGACGAGGGAGAAGGCcgggaggaagaagaagaaggaggccGGGATGTCAAGATTGGAGAGCAGCAGGAGGCACGGACTGCGCAGCACAGGACTGCAGGAGAGCGAGAAGAAGAGCCTGCCGATCAAGGCACTCAAGAAACAACAACAGCAACTACCCGCAAAGCTCAAGAAGAAACCGGTCGCCTCGACGAAGGACGCCGACGCCTCGAGCATCGACTCCTATCCCCTGAAGGCCAAGAAACCCCCCGCGAAGTCCAGCCTCGCGAGCAAGCCCAGCGCTCTCCAGAAGAAGCTCTTCGCCAAGGGCAAGAAGAAGCTGGACGCGCGTCGCGTCACCCGCTCGCGCACCGACGCGCCATCCTCGCCCACTCCGACCGGTGGCCCGTCGAGGCGGCCCACGAGGAAGACGAAGGAGGCCGCCGCGGTGTACATGGAGATACTGGGCAGGAAGCTGGTCAGTCCGGAGCTCGAGAACGACGACAACCTGTCGCTGGACAGTTTCCCCGAGCTGCCCAACGCCAGGAAGATCGCCCAGACGGAGAACGAGATCAAGGCGAAGGTCAAGTCGATGAAAGCAGCGGCGGACGTCAAgtcggcggctgctgctgcgggggtgaaggagaaggagaagaaggCGATGAATAGTGCTGGTAACGCCAGTGCCAAGCCCGTGAAGAGGAAAGTCGCGAAAGCCCCCGTGCCTCTAAAAAACAAGCGCCTGGTAAAGATACAGAAGTACTGTGAGTTAAACAGCGACGAGGAATCCATCAGCTCAAAAGACACCATCGAAGCCGTCAAACCCTCAACCACAACAACCACAACGACTacatcagcagcagcaacgaGACGGTCGGCACCCGCGACCACCGTCTCCGCAAAGGACAAAAAATCCGACATGAACCGGACGAGCCTTCGTTCCAGTCGCAGCCTCGTCTCCAAAAAGACCCTGCCCAAGCCTACGCCGAAGTCCGTTGTGTCCAAGGCCAACGAGGCGCAACAGACTGTCGCCAGCGACACAGCCAAAACGTCGAAACCCACGGAATCTCCAAATGTAGGGGCGAAAGCTAGCAGTAGCGCGAAGGAGACGACGATGACGGCTGCGAAGCGTAAGCGCGACGAcaaggagaaggagaaggatgTTACCGGTAAGCAGAAATCCGAGACAGCGAAGGGCAAGAGCAAAGCCGCGGCAGCCATCGAGGCTAGCGCAGCCGAGTCCGAGGAAGAGAGCCTGGGCACTATCCTGAACAAGCTGAAGAGGAAGAAGGAGAacgagaaggagaaggagaaggaggaaGAGTCCTCCAAGAAGCCCACCGAGACCAAGTCTACCAAGACTACTGCTACGACAGtcactaccaccaccaccaccacaacaacaacagcaacaccAGCAGCTGCGGTAACaacagcgacgacgacgacggcgacgacggcgacgacgacatCGAAATCGACGACGGTGGAGACGCTGAAGAGCCAGGCGGAGGAGGTGAGCACGGCCAAGATATCCGACGACGAGGAGTCCTTCCGCGGCTTCACGAGGAAGGCCGTATCCAAGGTGCTGAGCGTCTGCCAGTCCCACGTCAAGGCCAATAATCTCCTGTTGCTCGAGGATCTGAAAGATCTGAAGGATCTCGATAGCAAGCTGAACGTgaagcatcagcagcagcacgaCGTTGCGGGGGTGAAGAACGCGAAGGACGCGAAGGACGTGAAGGACGTGAAGGATATGAAGGATGTGAAGGATGTGAGGGATACGAAGAAGGCGGATATAAAGGTGGTGGCGACGACGACGTTTCCGTGTATTAAATCCATGCAGGACGCGGGGCTAATGATGATGCAGAGCAGTGCGACGAATAGCACGGCGGCCAATGCCTCGGTTAAGCAGGAGCCTGATTTTGGAGAATCGAAGCAGCCAATGCTGAAGGCCAAGCTCCCGAGCGGCAGCAATCCACCAGCCTCCCTGAGCATCTACGACATGCCGAAGACCCTGCTGAGCCACGGCCGCAAGGAGCGCGTCAACATGTCGACCGAGCAGATCGAAAAATGGCTGAACGAGAGCTCGCTCGCCAAGGAGGAGAGCAAGGTTGAGATGGAGAGCGTCTCCAACTACAAGTTCGACTCCGCTCCCCTCGACAAGTCGTCGACGACCTCCTCCATCGTCACCACCGCCACCACCGCCTCGTCGTCCCCTCAGAAGCCTGTCCCAGTCCCGTCCGCCTCTTCCTCCCACCTCCTGGACGCACCGACGACGCCTACCCACGGCCACCTCTCCATCTCGCCCAAGATCCAGCATCTCGTGCGGCCCGTCAACGTCACCCTCTCCAAGCTCTCGGACAGGCTGAAGAGGGCCTCCTCGGCCATCGGCTCCACCAGCAGGATGCCCTCGGTTTTTCTAACCGCCGGCGGCCCGGTcaagccgcagcagcagcagctgccgTCGATGCTGCTGCAGCCGAGCGCCAAGCCCAAGATCCTAGTGGCAACCGATAGTCCGGAgaagagggagagggagagggagagggagagggagagggagagggagaaggagaaggagagggagaaggagaaggagaagagGGACGTGGTACAGAGCACGCCGCCGAGCAGAAAGATGAGCAAGGACTCGTCTTTCGGCGAGGATGCCGCGGACAGCGACGCGGTGTCCAAGTCGGACGCCAACTCGGTGGGCGACTCCTCGGAGAAGAAGTCCCCCGGCAGTCCCGAGAAGAAGGTGTTTTTTCACCAGCGCAAGCCCTTTCTGCCGAAGGTGAAGGAGCGCGCGAGGCCCGCCCCGCCGAGCAGCGCCTCGGCCTTCTCGCCCGAGAACGAGAGCAGCGTCTACGCGTTCGAGAGCGAGGCCGAGGCGCCGCCCCTAAGCACGCCCTTTCGCAGGAGGGCCAGGGGGGACCAGGCCACCGCCAAGGACAGCTCCGtcgagaaggaaaagtcgtcAGGTACACAGTCGGTCAGTAGTGAAGCGAAGGGCAAGAGTGGCGAGGAAGCAACAAAAGTGACCGAGCCTTTAAACTCGCCGGAGGAAGCTCGGAAGGACGAAGCAAAGTCGCCTCCGCTGTTGGAAAGAACAACTCCAAAGAACTTCGAGCTTCCGAAAAACTTCGCAGATTTAACAAACATACAGGTGTTACCACTAGACAAACTAACAACAAGCTGGAGCAATGTAAGCTGTAGCGCCTCGATAGCCGTACAGGTAAACCTCGACGAGCaaaaacagcaacaacaacaacaatccCAACAAGACCCTCAAAACCCTCATCAATCAACAACAACAGACAGCACCGATTCCAACCCGCTACATCACAAGAGCACCGAGATCTCAACGCAGACCGAGACGACGAATCAGCAGCTCAACTCTGCCTCCGCCGCCGCAGCAgccgccgccgacgacgacgacgacaacgacagCGGCCAGCTGTTCTACATCCCGCTGCAGGCGCTGACGCGCAACGGCTCGGCCCAGGGCGGCCAGCAGCTCATCCAGGGCGTGGCGGTGAAGCTCGGCACGGAGGGCCCCACCGGGCCCAATCAGCGGGTCCTCCTCAAGGCGAAACTCGTGACGAAGCCGCCGACGTCGGTCGCAAGGTGTCCACCCGTGGGGACGGTGCAGCCCACGGCCAGGACGCCACAGGTGACGAGCGCCGATCAGACGGATATGCCGTCGATCTCGCAGGTCGGCCCGGATGGGGGATTCAAGTTTCAGGCGCCGGGGGAGAGGGGGAGCAAGGCTGGCACCATCGGGAGTAAGGACATCCACAAGACTCCCAGTCCCGAGAAGCTGAAATCGCCGAAGAGCGCGCGGGAGCGCAAAATGTCGGCCGACGGGACGAAGGCAGGCCGCAAGAGCGGCGGTAAGGCGAAGCCGATCGAGATCCACTCGCCGGTCAACGAAACCAAGTTCCCGAGGACGAGGGACGCCGGCGAGGAGGCGCGACTCGTCGAGGCGCCGACCTTTCGACCCACGGAGAAGGACTTTCAGGATCCGCTCGAGTACATCGACAAGATACGGCCGATCGCCGAGAAGTTCGGCATCTGCAAAGTAGTCCCTCCCTCGAATTTCAAGCCCGAATGTAAAATATCGGACGATATGCGGTTCACGGCTTACAATCACTATGTTCATCGTATGCTGAATCGCTGGGGTCCGAATGTTAAGGAAATGATGgcaataaagaaatatttagcTACGCAGAGTATTACTTTAACGCAACCACCATGGATTGGTGGTATGGAAGTTGATCTCCCACATTTGTATCAGACTGTGCAAAACTTAGGCGGATTGAAGGAAGTCATAGAGAAGAAAAAGTGGCAAAAGGTGGCCGACGGCATGAAGATACCGAGATCAGCGCAAGATCGAGTGACAAAGTTAGATGACATCTATTGCAAGTACTTGCTTCCCTATGATACCTTGTCACAAGatgAAAGAGATAAACTATTTAAAGATGTAGAGGCTGATTGGgcgaaaagagaaaaaagagaaaggCAAGAAACGCAGTCTAACGATACCGAGGACGATGATGACGAGGACAGTTCTGAAGAGATAGAAGAGTGCATTGTAAAGGGCCGCAACATGCCGCTGAACGCCTTCTACCGAATAGCCCGCAACACGCAGCGCATGTGGTTCGGCGAGACGCAGCGCGGCGGAGGCGGCAGCGGCAACGAGACCGAGGGCGCCTCGGCCGACGAGGTAGAGAGCGCATTCTGGCGGCACGTCGTCGAGAAGAAGCGCCACGTGTGCGTGCACGCGGCCAGCATCGACTCGAGCGGCCGGGGCTTCGGCTTCTCCGTCGCCAAGAACAGCCCCTTCGGCCGACATCCCTGGAATCTCAAGATTCTTACTAATAACGCTGGTTCGGTGCTCAGGGCGCTTGGTCCGCAGATGGGCGTCACAATACCAACCCTCCACGTGGGCATGCTGTTCAGCGCGTGCTGCTGGTACCGCGATCCGCACGGTCTGCCCTGGATCGAGTACCTGCACACGGGCGCGAGGAAGATCTGGTACGGCATACCGGACGAGCAGAGTCGGGCCTTTCGCCAGGCCCTCGCCAAGATGTTCCCCCGCTACTGCAAGAACAAGAGGATCTGGCTGCCCTCGGACACGGCCATGGTGCCGCCCGACATGCTCGTCGACAACGGCGTGCCCCTCTGCAGGACCGTGCAGGAGCCCGGACAGTTCATCCTCGTCTTCCCCAAGGCCTTCACCTCGAGCATCTGCACGGGCTACGTCGTGTCGGAGAGCGTGTACTTTGCGCAGCCGTCCTGGCTGGAGACGGCCGAGCAAGCGTTCAAGgATATACATGATAGCTGTGAgccttcaattttttcatttgaaagACTGTTATTTAGCATTATCAATGACTCTAGATCTCATATTGACGTACTTAAGCAGattttacCAACTGTTATCAAAGTTTGTGATAAGGAAATAGAAAATCGCAAAAAGTTAAAAGAGTTGGGCCTCACTAATATCGAGAAACTACCATTGCCAGAAAGTGACAAGAAAGGAAAGGCTAAAAGGGTGAAAGAGGATGAGGGAGATTACGAATGTGATACTTGTCGATCAAGCTTATTCGTTTCTCTAGTAAGCAACCCTACAGATGAAAGCATATTTTGCCTGACTCACGGCATACAATATATAGAGAAGAAAAAGCAAGTTCTGAAGAATTGTACGCTTATGTATACGTACAGTGAGAGTGAATTGAACGATCTTATTCACAAACTAAAGGACAGGATCGAAGCCAAATCTAAAAAGACTAATCAAACAAAACAAGCTAAATAG
Protein Sequence
MVLSRNDKRKRKEGDLVDLMDPLAEAPKRTKIHAQRKFAQGAATPVFSPASTPIKEKEKAKPAVFTELITHKRPNTEDFLTFLCFRGTSILPPSLNFFSASSKKDKHAHQPQNALKPPGSSLFSKANGTCGKPSSAEHQASPASNQKPSTTREKATNGPKKPTAAATPTAAAPKTMKQKTTSTAIQALKRKYQEQRLAKQRLKKKFKPTSMKTRSGAGGATSEVAPSERGQTREKAGRKKKKEAGMSRLESSRRHGLRSTGLQESEKKSLPIKALKKQQQQLPAKLKKKPVASTKDADASSIDSYPLKAKKPPAKSSLASKPSALQKKLFAKGKKKLDARRVTRSRTDAPSSPTPTGGPSRRPTRKTKEAAAVYMEILGRKLVSPELENDDNLSLDSFPELPNARKIAQTENEIKAKVKSMKAAADVKSAAAAAGVKEKEKKAMNSAGNASAKPVKRKVAKAPVPLKNKRLVKIQKYCELNSDEESISSKDTIEAVKPSTTTTTTTTSAAATRRSAPATTVSAKDKKSDMNRTSLRSSRSLVSKKTLPKPTPKSVVSKANEAQQTVASDTAKTSKPTESPNVGAKASSSAKETTMTAAKRKRDDKEKEKDVTGKQKSETAKGKSKAAAAIEASAAESEEESLGTILNKLKRKKENEKEKEKEEESSKKPTETKSTKTTATTVTTTTTTTTTTATPAAAVTTATTTTATTATTTSKSTTVETLKSQAEEVSTAKISDDEESFRGFTRKAVSKVLSVCQSHVKANNLLLLEDLKDLKDLDSKLNVKHQQQHDVAGVKNAKDAKDVKDVKDMKDVKDVRDTKKADIKVVATTTFPCIKSMQDAGLMMMQSSATNSTAANASVKQEPDFGESKQPMLKAKLPSGSNPPASLSIYDMPKTLLSHGRKERVNMSTEQIEKWLNESSLAKEESKVEMESVSNYKFDSAPLDKSSTTSSIVTTATTASSSPQKPVPVPSASSSHLLDAPTTPTHGHLSISPKIQHLVRPVNVTLSKLSDRLKRASSAIGSTSRMPSVFLTAGGPVKPQQQQLPSMLLQPSAKPKILVATDSPEKREREREREREREREKEKEREKEKEKRDVVQSTPPSRKMSKDSSFGEDAADSDAVSKSDANSVGDSSEKKSPGSPEKKVFFHQRKPFLPKVKERARPAPPSSASAFSPENESSVYAFESEAEAPPLSTPFRRRARGDQATAKDSSVEKEKSSGTQSVSSEAKGKSGEEATKVTEPLNSPEEARKDEAKSPPLLERTTPKNFELPKNFADLTNIQVLPLDKLTTSWSNVSCSASIAVQVNLDEQKQQQQQQSQQDPQNPHQSTTTDSTDSNPLHHKSTEISTQTETTNQQLNSASAAAAAAADDDDDNDSGQLFYIPLQALTRNGSAQGGQQLIQGVAVKLGTEGPTGPNQRVLLKAKLVTKPPTSVARCPPVGTVQPTARTPQVTSADQTDMPSISQVGPDGGFKFQAPGERGSKAGTIGSKDIHKTPSPEKLKSPKSARERKMSADGTKAGRKSGGKAKPIEIHSPVNETKFPRTRDAGEEARLVEAPTFRPTEKDFQDPLEYIDKIRPIAEKFGICKVVPPSNFKPECKISDDMRFTAYNHYVHRMLNRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQNLGGLKEVIEKKKWQKVADGMKIPRSAQDRVTKLDDIYCKYLLPYDTLSQDERDKLFKDVEADWAKREKRERQETQSNDTEDDDDEDSSEEIEECIVKGRNMPLNAFYRIARNTQRMWFGETQRGGGGSGNETEGASADEVESAFWRHVVEKKRHVCVHAASIDSSGRGFGFSVAKNSPFGRHPWNLKILTNNAGSVLRALGPQMGVTIPTLHVGMLFSACCWYRDPHGLPWIEYLHTGARKIWYGIPDEQSRAFRQALAKMFPRYCKNKRIWLPSDTAMVPPDMLVDNGVPLCRTVQEPGQFILVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQAFKDIHDSCEPSIFSFERLLFSIINDSRSHIDVLKQILPTVIKVCDKEIENRKKLKELGLTNIEKLPLPESDKKGKAKRVKEDEGDYECDTCRSSLFVSLVSNPTDESIFCLTHGIQYIEKKKQVLKNCTLMYTYSESELNDLIHKLKDRIEAKSKKTNQTKQAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-