Basic Information

Gene Symbol
ARID5B
Assembly
GCA_949152435.1
Location
OX424575.1:34539008-34558237[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.1e-25 5.8e-21 77.1 0.0 2 89 296 381 295 381 0.95
2 2 1.3 1.8e+04 -1.5 4.1 3 20 1433 1450 1431 1465 0.77

Sequence Information

Coding Sequence
ATGGCCGAGAGGGGTGGAGTAAACCCGcggGACGAGGTACTGACGATCTCGGAGAAGGTAGTCGTGCGCGTGCACGACCTGGTCACATGGCTCTCGCCGGGGCTCGAGTGGTCCTGGGGCCGGGAGGTCTCCTACCCCCCGACGCCGAGCTCCTCGCCGGACGCCAGTCCCCAGCCGCAGGTGCTCTCCGACCCGGGCCTCGACTTCACGGACGTCGAGCGCCACCAGAAGGACCTCGAGGCGACGATCCTCCGCGCGAGCAGTCCCAACTCCTGCGTCGCGCAGACACAGACGCAGACGACGACGCAGACGACGCAGACGAGCCAGACGACGACGCAGACGACGACGCAGACGACGACGCTGACGAGCGGCGGAGTGTGCACGCGGCGCACCGACGCCCAGCAGCAGACCAAGGTCGTCGTCCTGTCGTACGCGAGGTACTGCCGGTATCGGGCCCTGCTGCGCAGACTCGACGGCTCCGAGCAGTCCTGGCTATGCTCGTCCATCGCCGCGGCGCTGGGGGGATTCACCGCCATGCCCGGGACCAGGGTGCTCTTCTGCAGGGATACCTTCGACTATCCGGATCTCGAGACGCACGAGCTACTGTGCAATCATTTGGCGCCCAAACTGAAAGGCCGGCCTCGGAGAAAGCGCAAAAAGCGCAGCGTGTCGCCGGCCGGCGAGTCGAGCAACGAGAGCGAGGCCTCGGTCGCCTCGTCCGCGGCCGCCTCCACGTCCAAGGGCTCGAGCTCGAGCTCCGGTGGGCAGTCGTCGGGCAGGCCCTcggccaccgccgccgccgccgccgccacggCCTCggcctcctcctcgtcctcgtcctcgtcgtcccTGGTGCGGCGCAGCGAGCGCAAGACCACCGCCGAGGAGAAGAGATTCGTCAGCGACGTGCACAGCTTCATGACCTCGCGCAACACGCCGCTCGGCAAGATGCCGCTACTCGGATACAGACAGATCGACCTATTCGTGTTTTACACAAAAGTTCAGGAACTGGGTGGATACGACAAGGTTAGCGCGAATCGTCTGTGGAAGTCGATCTACGACGAGATGGGCGGAAACACAGGTTCAACGAGTGCTGCGACAATAACGAGAAGGCACTACGAGAGGTTGCTACTACCTTACGAGAGATGCCAGAAGGGTGAGGAGACGAAAGTTAGACCAAATCAGGGCGGCAGGCGCATCAAGACACCCAGTATATCAGACGTGTCGGAGGATTCCGTCGAGATCAAGCGGGAGGCCGAGAGTCCACCGCCTTCGGAGACGCCACCTCCCTCCGAGGCGTCCAACTCCACGACAGTTACACCTCCTCCTCTACAGTCAATTCTTTCGACTTCGCCATTTCTGCCGGGAGACAAGCCACGCTCGGAGAGCGGCAAGACGTCGTCGCTGCGCAGCGTGCGGGTCAAGCCCGAGCGCCTCAAGTCCCTGAACACGATAATCGCGACCAGCAATCCAGCGCAATCTGCCACCAGCCAGCAACAACTGCCCAGCTCGCCGACCTCCCTGCTGctcgcgacgacgacgacgacgacgacaaccgcgacgacgacgacgtccaAGACAACGTCCTCGGCCATCTCGTCGCCAACGAGCACGCCGCCCGCCTCGACCGCGCCGACGAATCCCAGCCAGCACAGCGTGCTCGAGAGGCAGCTCAATAGTCCTCTTATTACACATCAGGTACCACCATCGTGTTCGCCGCCAGGACTGCCCGTGAGCCAGGTGGCAACGAACGCCCCGACAGTGGTGACGCTGACACCGCCCCCCGAGAAGGACATGAAAGAGATCAAACTCGATCCAAAGCAGACGGCTAGCCTACTCGCCCAGGGCAAGGAGAACATACCGCTTTTCGAGGAGAAGAGCCCGATATTCGTCGATAAGACGATCGTGGCGCCGCGCTCGCCCGAGGTTATCGACCTCGAGACCGAGACCGAGCCTGGTACCCGGGACAAGCTCATCATTCCCAGCTTCAAGAAGCGAAAACTCGAGATACTGCGCGAGGGCGGCCTGGAAGTCACGCCCGTTGAACTGGATGCTCGGCCGAGCGTGATCCAGCCTACGACGACGGCCAGCGCCAATCAATCGTCCACCACGACTACCACGAGCAACAGCTCGTCTTCGTCCTCATCCTCGACCAGAGCCTCGCCGTCGCCAGTAGCGATGATACCCACGATGTCCGCCAGCAGCCTCTCGTCCCCCatgaagcagcagcagcagcagcagcagcagccgcagcagcaagAGGACGGCAGCAATCAGCCCTCCTTGAGTCCAGGCTTCACCTTGCCCCCGAAGCTGATAAACGTGACGGTGACCCCGGACATCGGCCACATGCTGCCCAGAAACTCATCCTCCGAAGCACAGTCACAGCATCAGCAGTCGCCTCAACCGATGACCCCGATAAAGAACAACCAGATGAACACaagtagcagcagcagtggcagcaGTCGTGGCTCGCCCTCGCCCACGCACAGCAACAACAACCTGCTGACGTCCTCGCCGGTGTCCGCCAACAGTCGCGTCATCAATCTGGGCAACTCCAACAACGCCACCCTCCTGCAGCTCTACGCCAACGCCAACGTGCCCGTGCCGCATTCCCTTGCCGCCGCGGCGGCGGCTGCCCAGCAGCAACAGGCGGCAGCCGGCAATAATCATCGATTCGTGCCGCCACCGCCGCAGCTGCTCATGCCCAATGGGGGCGCCAGCGGCAGGCCCATGACCCACAAGGTCACCCAGTCCAGGTCGATCTTCGGCAACAACGACAAGATGGTCTACGGCAATCCCAAGGACATTCTCGTGGCGCCCAAGTACATGCCCGCGATGGTCCCGCCGGCGCCCCATGTGCCCCGAGGGCCAAGTCGCGGCAACGGCAGCGACGCCTCCTCCCCCGGGGTCCTCGATCTCACGCAAAGGGCCCTTCCCTCGGCGAACGAGCGTTCCACCTACGGCCGGCCCAACCTGGAGATCGTGAGGGTGCCGGTGGTACCTCGGCCCATCCCCCTGAACCTCGAGATGCGCAACCATCACGCGGAGCACCAGCAGCCGGCCCAGCCACAGCAGCAGCCGCACCAGCAGCGCATCGCCGTAGCTTCGAACATCTGCAAGGAGGTGAACAGCGGCAAAGTGCAGGCGGTGCCGCAGACGCAGACGCAGACGCAGTCGcagctacagcagcagcagcaagccgAGGCGACGCGCAAGAGCCAGTTCGTGACTGGTAGCGTGCCGCCCAGTCAAGCCGGGGGCTACGCGAATGTACTGGACAGCCGTACCATGGCCACGAATAATCTGGAGATCACGCTGGTCAGCCCGAAGAAGACGGCGGGCGGTATCGGCGTCGGACTGCCCCAGCTCAGTCCGCCCTCGAGGAGTAACAATGTGATGCCGCCATCGTTGCCATTACAGAGGagacagcagcaacagcagcagcagcagcagcagcaacaacaacagcagcagcagcagcagcaacaacagcaacagcagcagcaacagcaacaacagcagcaacatcAGCACCACTTGAACGGCAAGTTTCCAACGAGAATGCCCTCGGAGCCAGTCTCGCCGTACACACCCCGCAAGCCTACCTCGgcgagcggcagcagcagtggcggcATCAGCAATCACCACCCGGTCATACCGAACGTACCGAATCTGAGCCACCTCAGCGGCGCCTCGTCCTCGAGCTACGGCAAGCTCAGCCCCATGGGCAATTACCAGCACATGGCCATGGACAAGAGGCGAGCCGCGGCCGAGGCCGCCGCCAGCAGTAAGGAGCAGCAGCGCAGGACTAGCGAGAGCGACAAGATCGCgctgcagcagcaacagcagcagcagagactCGAGGCCGGCCCGACCGCCCTCTCCAAGCAGCAGCAGTCCAGGGACTCCGATGCGTCGTCACGCAGGCACAGCGTGCCGAGCCTGCCCACGGGCTTCATCCCGGCGATGCCGGCGAGCAGTCCCTCTCCCTACCTGGCCCACCAGCTGGCCGCCGCGGCCGCCGCCGTCCAAGCCAACAACAACGGCAACAACGGCTCGTCGTCCACGTCGGCGGCCGCGGCCGCGGCCGGCAAGTTCCTGCCGATCCTCGACCCCATGTACTACTCGGCCTTCTACAACGGCCTGTTCTCCGGAGGTCCCATGGGCCCGGTGCCGGCTCCCGGTGGCGCCGCCCCCAACGCGACCTACCTGCCGCCCGAGATCAGCGCCTACTGCAAGGAGCTGCTCGCCTCCTCGTCCTCCGCCTCCTCtgcccagcagcagcagcaccaacACCAGCAGCTCCAGCAGCTCCAGCAGttccaccagcagcagcagcagcagcagcaccaccaacATCAgcaccaacagcagcagcagcagcagcagcagtcgagGATGCACGCAGCAGCGGCCAGCGCCGCCCAGCAGCATCACCAGCAGCAGCCCGCCGCGCCCACGTCCAAGTAG
Protein Sequence
MAERGGVNPRDEVLTISEKVVVRVHDLVTWLSPGLEWSWGREVSYPPTPSSSPDASPQPQVLSDPGLDFTDVERHQKDLEATILRASSPNSCVAQTQTQTTTQTTQTSQTTTQTTTQTTTLTSGGVCTRRTDAQQQTKVVVLSYARYCRYRALLRRLDGSEQSWLCSSIAAALGGFTAMPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPAGESSNESEASVASSAAASTSKGSSSSSGGQSSGRPSATAAAAAATASASSSSSSSSSLVRRSERKTTAEEKRFVSDVHSFMTSRNTPLGKMPLLGYRQIDLFVFYTKVQELGGYDKVSANRLWKSIYDEMGGNTGSTSAATITRRHYERLLLPYERCQKGEETKVRPNQGGRRIKTPSISDVSEDSVEIKREAESPPPSETPPPSEASNSTTVTPPPLQSILSTSPFLPGDKPRSESGKTSSLRSVRVKPERLKSLNTIIATSNPAQSATSQQQLPSSPTSLLLATTTTTTTTATTTTSKTTSSAISSPTSTPPASTAPTNPSQHSVLERQLNSPLITHQVPPSCSPPGLPVSQVATNAPTVVTLTPPPEKDMKEIKLDPKQTASLLAQGKENIPLFEEKSPIFVDKTIVAPRSPEVIDLETETEPGTRDKLIIPSFKKRKLEILREGGLEVTPVELDARPSVIQPTTTASANQSSTTTTTSNSSSSSSSSTRASPSPVAMIPTMSASSLSSPMKQQQQQQQQPQQQEDGSNQPSLSPGFTLPPKLINVTVTPDIGHMLPRNSSSEAQSQHQQSPQPMTPIKNNQMNTSSSSSGSSRGSPSPTHSNNNLLTSSPVSANSRVINLGNSNNATLLQLYANANVPVPHSLAAAAAAAQQQQAAAGNNHRFVPPPPQLLMPNGGASGRPMTHKVTQSRSIFGNNDKMVYGNPKDILVAPKYMPAMVPPAPHVPRGPSRGNGSDASSPGVLDLTQRALPSANERSTYGRPNLEIVRVPVVPRPIPLNLEMRNHHAEHQQPAQPQQQPHQQRIAVASNICKEVNSGKVQAVPQTQTQTQSQLQQQQQAEATRKSQFVTGSVPPSQAGGYANVLDSRTMATNNLEITLVSPKKTAGGIGVGLPQLSPPSRSNNVMPPSLPLQRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQHHLNGKFPTRMPSEPVSPYTPRKPTSASGSSSGGISNHHPVIPNVPNLSHLSGASSSSYGKLSPMGNYQHMAMDKRRAAAEAAASSKEQQRRTSESDKIALQQQQQQQRLEAGPTALSKQQQSRDSDASSRRHSVPSLPTGFIPAMPASSPSPYLAHQLAAAAAAVQANNNGNNGSSSTSAAAAAAGKFLPILDPMYYSAFYNGLFSGGPMGPVPAPGGAAPNATYLPPEISAYCKELLASSSSASSAQQQQHQHQQLQQLQQFHQQQQQQQHHQHQHQQQQQQQQQSRMHAAAASAAQQHHQQQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-