Basic Information

Gene Symbol
Arid4b
Assembly
GCA_949152435.1
Location
OX424576.1:14053636-14069831[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-28 3.3e-24 87.5 0.2 1 89 312 399 312 399 0.95

Sequence Information

Coding Sequence
ATGTCTTGTAATGTTTTGCAGGGGGACGATCCGCCTTACCTGTCGGTGGGCACTGAGGTCAGTGCCAAGTATAAGGGGGCCTTCTGCGAGGCCAAGATCAGGAAGGTTGTGCGCAGCGTCAAGTGTAGAGTGACTTACAAGCAGGGCCTGGGTACGGCCACTGTCACAGACGAGCAGATCAAGGGGACGCTGAGGGTGGGCGCTTCCGTGGAGGCAAGGCACAATGATAGGAAGGACTTTGTCGAGGCTACCATCACCAAGATACAAGACTGCAGTCAGTACACGGTTGTGTTCGACGACGGGGATATTACTACTTTGAGGAGGACAGCTCTGTGTCTGAAGAGCGGGAGACACTTCGCGGAGAGCGAGACTTTGGACCAGTTACCCTTGACGCATCCGGAGCACTTTGGGAATCCTGTTATCGGTGGGAGACGTGGCCGGAGGTCGAGACAAACTCAagATGACAGCAGTGATGACGAAGATGATGTTCCAAGAGGCAGCAATGATTCAGGGTCTGGATCTGGAGGGAAAGAGGGATCGGAAAGGGAACCTGAAATTGGAAGGGTGGTTTGCGTGGAACTGGGTGATAAGAAGAAGAAAGACAATTGGTTCCCTGGTCTAGTTGTTGCTCCAACTGCCCAGGATACTGTGAGAATCAGAGTTCGTGATGATTACCTTGTTAGGTCATTCAAGGATGCTAGATATTATACGGTGCCGAAAAAGGAAGCCACTGAATTCACCAAAGAGCTGGTCAATAAAGTGGAGAACAGTGCTTTGAAAGTAGCTGTGGaaaaagctttactatttttagaaaagaatgAGTTGCCCCCTCATTGGGACCGAGATTCATTATTTGGAAACTCGGTATCAAGTGGAAATAGCGACTCAGATGCAGAGCTTGACTCAgataGTTCTGACGACGAGCCGCGCGAGGAGAAGGACCACTTCGTCGCGCAGCTGTACAAATTCATGGACGACCGGGGCACGCCCATCAACAACTGCCCGATGATCGGCAACGAAGACATCGACCTCTACCGTCTCTTCCGCGCGGTCTACAAGCTCGGCGGCTACAACCGCGTGACGAATCAGAACCAGTGGAAGCTCATAACCAGGCGTCTGAGCTTCTCCATGCAGAACACCTCCTCGACGCACAACCTCGTCAAGCAAGCCTACAAGAAGTTCCTGCACTCCTTCGAGGACTTCTACCGAAAATTGGGCTGCACGATGGTGAACCATCCGCGCGGCAGCATGAGGAAGCAGCGCCCGGGTCGCAGCTTGATCCGCGACAAGGATAGGAACACACCGGTGCCGTCGCAGGACAAGACGGTGGTGAAGACGGAGAAGGAGGACGACGAGAAGGAGCAGCCACCtgcaccgccgccgccgccaccgcagcagcagcagcaacaacagcagcagcaacagcagcagcagacgcaACCGcaggtgcagcagcagcagcaacagcagcaacagcaggcGAAGAAGAGCGGTAGCGTTGTTGCGGAGGAGGAGATCAAAAAGGAGAAGCGCGAGGTGAAGAAGGAGGTGGCCGTGAAGGAGGAGGAGGTGCCGGTCAAGGTGAAGCGGAAAGAGGAGCCCGTGGTGGCGGAGGAGAGCGCGAGCGGCCAGGAGAGCGACGTCAACATCGAGGCCGAGGAGGAGTCTTCCAGCAGCGAGAAGTCGCAGAAGTCGAACACCTCCAGGCTGACACCGTCGTCCGGAGTCGGCGGCAAGTCCAAAGCTGCGGCTGCAGcagcagcagcggcggcatcagcagcagcggcagcagcagcggtcgCGGCCGCAGCAGCCAAGAGCAAAGAGGACGCGGGCAAAAAGAAAGCCCTGCCCGAGAAGAAAAAGCCCGAAGCTAAGAAGCAGGAGAAGAAGGACGACAAGAGCAAGGAGGAGGACAGCACGAAGACGCGGTCCAAGTCGAAGGAGGACGTGGTCAAGGTCGGCAACAGCGGCGCCAGCAAGCCGAACTCGTCGGAGGCGCGAGAGACGAGGACGCCCTCGCGGGACTCCGATCGCAAGGTGTTCAGCAGCAAGCAGAGGCGAATGACCGACGAGGAGCTGAAGAAGCGCGGCAGGAAGAAGAAGGAGGCCGAGGGGGAGAAGGGCCGGACGGTGCCCGAGGAGCAGCGATCCGTCGAGTACGCGCCGAGCTACAAGGGACCCGTTGAGATCGGCGACAGGCTCAAGGTGTACTACGGCCCGACCCACGAGTCGAAGGTCACGTACGAGGCCAAGGTCATCGACATGGAGAAGGACGGGAGCGAGGCCGTGTATCTGGTTCACTATACGGGATGGAACACCAGGTACGACGAGTGGATCAAGGGTCTGCGAATCGCCCAGAACTTCACTCAGGCCCAGGGTCGCGTGAAGCGCACGAAGGCGACCCCACGGCCGCAAACCCCGAGCGCCAACTCCTCGGCGAAGTCTTCCAAGGGGGCGACGGCCCCGAACGCGGGCACGGGCGCGGCGTCGACGGCCAGCGCCCAGAGCCGTCGTCGAGCTCAGGGCGAGGCCCCGTCGGGAGCGGGCAGCGGAGGTGGCTCCTCGTCCCTGGCGAACAGCAAGGACTCGCGGAAGGACGATCGCGAGGGTACACCGGCCACGAGGTCCACGACCCCGTCGCCCCTCACCTCGTGCATATCCAGGACGAAGAGCCCCGCGACGACGGCCAACAGCAATAGCCGGCCGACGAGGCTGACCAGGAACGCCGACTTTGCCTCGCTGGCCCAGGAGCTGGGCAGGCGCACGAGGCGGACCTCGGGACACGCGGATGCCATGGCGGCCGAGGAGTCAGAGAGCGAGGACACGGACTCGATGGAGTCGGAGACGAGCGCGGAGCCCGAGGCCAACTGCCAGcaggcgcagcagcagcagcagcagaggccGAGGTCCAGGGTCAAGGAGAGAAATCGTCGCGAGGCTAGGAGGCGCGCGGAGAGTCGCATGAAGATCGAGGAGACAAGCGACGCTGAGGCCGAAAAGGACGCGGAGGAGCCGAGGAGGGGTAGGAGACTGAGAAAGACAATCGGTAAGCTGCAAGAGGTGAAATCCGAGCCGGAGTCCGATGAAGAACAGCCCAAGGGGAGGGATTTCGATCTGAATCAGATCAGGTCGGAGCTGAAGGGATTCGATAAGGCCGTGAAACTGGAGATTGCGAGTAGCGTCGAGCCTGATcaagacgaggaggaggaggaacaAGCCACGACGCCGATCAAGCAGGAGAAAATCGAGCCCGAGACGCATGCGGAGAAGAAGCTAATTCCGGATCCAGCCGACAAGAAGCGCGAAACCCCAAAGGTCGAACTTCCGAGTGTCGCCAACGCCCCCATCAAGCGTGAGCCAGTTAAGCTCGAGGCGAACGCTATCCAGCCGGAGAGCACCGAGGACATTTACGAGTTCAAGGAACCCGAGCCCTTCGAGTTCGAGGTGCGCAACAAGAGGGACTcaggcggcagcagcagcggcagtacCGCAGACAAGGACAAAGACAAAGACAAAGACAAAGACAAAGATAAGGAAAAAGACAAAGACAAAGAGAAAGACAACAGCAAGGACAAGCCGAAGAAGCGCAACTTCGAGGACGACCTCAAGAGTCCAAAGAAGCGTCAAAAAACTTTTGGCGCAGCGGCCGGTgtggcagcagcggcagcggcagtggcagcggcggcagcagcgacGGCAGCGACAGCGGCAGCTACTCCGCAATCGACGGGGAAGGTCGAGTCAAAGACCGAGATCGGTCCGACGGAGCAGCCGATCGTCGAAGCCAAGAAGAAGCCCCGAAAGATCTTTAAAAAAAGCGAGGAGCCCGAAGAAGCCGACGCGGAGAGCGAGGATGGTAACAGCAGCTCGAGAGAGCTGTCCAAGTTCTTTCCCGCAAATTACAGCGGCGTAATGGAGTCGAAGCGCAAAGACGCTTTCGCCAACTCCGTGCGCGCCGGCGACGAGACGGGTGGCGCCGCCGCGCCGGCTCCTGCTCCGACCGAAAACTCCATCGAGAGCCCGAAGAAGCGACAGCCCAAGACGTTCGGCGCCGCCGCAGCCAAGAACAACAGCGAGGCCAAAGCGGGGGAGTCCGCAGCTGGCACGGAGAGCGTCGTCCTGGACGGCAAGAAGAAGGCGCGCAAGACGCTGAACAAGCAGACGGAGGAGAACGAGGAGGCCGAGGAGGCTGCCTCGAGCAAGGAGCTCGCCAAGTTCTTCCCGAACTACGCGGGCAAGAGCTTGACTCGCAAGGAGGCCTTCGCCAACAGAAAGGCCGAGGAGAATTCCGCGAAGAAGGCCACGGACGAGGACGCGGCCAAGAATCCAAAGAAGAGGCAAAAGACTTTCGGCGCCGCGGGCGCGGCCAGCAAGGCCGCCGAGGCGAACGCCGTGGCCGACGGCGCCACCGCGACCGAGACCAAGAagagacagcagcagcagcctttGAGCAGCAGGCTGGCGGCCGCGAGCAAGAAGCTCGAGGAGGCCGAGGAGACGGACGAGAGCGGCAGCGACGAGGCCGAGGAGCCGAGCGCCGGCACCGGCAAGACGACGAGGGACCACGCGACCAAGTACTTCTCGCACTACTCCGGGCCCAAGGCGAAGGCGGCCGCCGCGATGGCCAACGACAACGACAGCAGCCTGCAGGACCGCCTCGCCGCGGTTGTGGCCGCCGCCGCGGCTTCCTCCAAAGCCGAAGCTCAGACCAGAGACGAGCCCTCCAAGCTGTTCAACTCGGCCAATGCCTCGTCGAGCCACGACAAGGACGACGGGAAGACGAAGCCCGGGGACTCGGCTGCCTCGACGTCGAGCTCGCTCGACGGCAAGCAAGCCTCGACGAGCACCGACAAGAAGCGAGCGTCGGACTCCGGCGCGCCCGCCAAGCCGGAGACGAAGCAGGAGCCGAAGCCCCTGGACTTCACGCCCGTCGTGCCGCACACTGTTCCCGCGCCCGCGCCCATCAGCGCCCGACTGCCCGCGACGGCCAGCATCGAGGAGAAGCTCTCGGCCGCCGCGGTCTTCCGCAGCAAGCTCAAGGACACGAAGAAGGACGAGCACGACTCCgacggcagcggcagcagcagtatcACCCCCAGAAAGACGCTCAAAGACGTGGCCAATAAGAAGGCCGAGACACTCTCGGCCAAGAAGGCGAAGGAGAAGGAGGAGAGCCTGAAGGCCAAGCACGAGCCGCCcgataagaagaagcagcagcagcagccggcaGTCGAGCCGCAGATCATGCCGAAGAAGGATCCCCTGCAAGAGATCGAGGTGCGCAAGGATCCCCTACTCGAGGTTATgaagaagaaggaggaggagaTGACGAAGGCCAAGAAGGACGCAGAGGCGAAAGCGGCTGCCGtcgccgcagccgccgccgccgccgccgccgccgccgccgccgctgctgctgttccTTTACCCACGCCGAGCACGACCGTCACCAAGACTTACGGCAGCCAGAGGAAGGACCAGGCGGCGAAGCTGGAGGAGGCTTGGAAGAAGAGCAGCATCTTGGTCACGGCGGCCACCACGACGACGAGCGCGACGAGCAACACCATCGAGAAGGTCGCGTCGGCTGAGCTacccaacagcagcagcagcagcgaagtCGTCGTCAAGGAGTACGTAAGCGTGCGCAAGGAGACGATAGTCAGCAGGATCAAGTCGAGCATCGATCGGGACTCGGTTGACTCGACGGACAGCAGCGACAGCGAGAGGCGGCTCACCATCATCGACAGCGAGGAGTTCCCCGACGACAAGTGCAACGACTCCAGCAGCGACGTCAAGCCCAAGAGCGTCGCGGCGACGATTGTCACGGGCGGGCAGTTCAACAGTGTGGCGCAGCAGGGGCGCGCGAGCCCGGCCGTGGCGGCCGCGGTCGCTACGATTCAGAACGAAATGAAGCAGCAGATGGCGAGCGTCACCGGGATCGTCGGCGGGATGCTGCAGGTCAAGAGTGCCAAGATGGAGGAGGACGGGGAGAATTTGAACTCGCTGCTGTGCGAGGAGGAGATACCCGGCTCGCCGACCCCGGGCCTGGAGACCATGGACCACGAGCACAGGGCTACCAGCTCGCAGAATCTCATGAAGTCTGATATTGGCAGTAAAATGGCTGTGGCGTTCGTAGCAGCACAATTGCCACTGAGTACGATACCATCGTCCACCCAACTGACCAACTGCGCAATGGTAACGACGATGAGCGGTGGCGTCGCGGTGCCCCAGAGCACGAGCAACCTCGTGACCGTTGCCATGACCGTTCAGCACGCCAGCATTCAACCGCTTCGCCAGGTTCAACCGCATCCTCAGCTTCTGCAGCCTCTGCCGCAGCCGCAACAACctcagcagcaacaacaacaacaacaacagatAATACATCATCCTCAACCGCAAGCCCCACAAGCACCACAAATCCAGCACCCgcagcaacaacaacaccaTCACCAACAACCGCTCCAACCAcaaccacaacaacaacaacaacagcagcaacaccAGCCACAGCAGCAACACCAGCCTCAGCAGCAACAGCATCCTCACGAGCAGCACCACCCCGCGGCCCCGCTGCCAATAGCTGTCCAGCAGCGCCGCGAGAGCAACGAGGCCGCCCCCGTGATGGACAACACCCCGCCCACGACCCCGGACTCCAGCATCTCCAACATCTCGGGCTCGCCGCGCGACGAGCGCACGGGCGGCTCGACGCCCTCCTCCTCCGAGGACAACAACTCCAAGCTGAACCGCGACAGCTCCGAGGCGGAGAACGACAGCACGCTCGGCCGGGGCGGCAAGGCCAGCGAGGACGACGGCTCGTCGTCCCTCGTCAACTCCGAGCACAACGGCAACGGTGGCAACGGCGccaccacctcctcctcctccgacCGGCTACCCAAGCCCCCGGCTAAGCGCTCCTCCACCAACGACACCGACGGCGTCTCGCCGAAGAAGCGGAAGAAGCGAAAGGACCAGGACGCGGCTGGCTCCTCCTCGGCGGGTGGCAGCTGCGGCGGCTCCGCCGCCCTCGCCTCCGGCAAGAAGTCGCCCAGGCAGAGCGCGAGAAACGCGAGACACGGGACCGGAAGCGACAGCGACGACACGAGCGAGGGATCGAATCAGTGCGTCAACAGTTCCACGAGGCAGACGAACAACGGGGCGACCAGTGGCACGGGGCCGGACGGACCCTCGACCTCCGCGAGGCCCCCCAGGCCCACCAAGTACAACTTCCTCGTTGAGCCTGATCCTTCGCTGGACGGACCACAGAGACTAGCAGTTCTGCAGCAAAATCTCGCAGAACTGCGCAAAACTTACATGAACGAGAAAGTGAAGCTCGCCGGTATTGAGAGGCGTCGGAAAAAGTTGAAGCGACGAGAACGAGAAGCACAAAAAGCTGCAAAGGCTGAAATGCAACAGGCGTGTTCGTGA
Protein Sequence
MSCNVLQGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDEQIKGTLRVGASVEARHNDRKDFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQTQDDSSDDEDDVPRGSNDSGSGSGGKEGSEREPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSALKVAVEKALLFLEKNELPPHWDRDSLFGNSVSSGNSDSDAELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFSMQNTSSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSMRKQRPGRSLIRDKDRNTPVPSQDKTVVKTEKEDDEKEQPPAPPPPPPQQQQQQQQQQQQQQTQPQVQQQQQQQQQQAKKSGSVVAEEEIKKEKREVKKEVAVKEEEVPVKVKRKEEPVVAEESASGQESDVNIEAEEESSSSEKSQKSNTSRLTPSSGVGGKSKAAAAAAAAAASAAAAAAAVAAAAAKSKEDAGKKKALPEKKKPEAKKQEKKDDKSKEEDSTKTRSKSKEDVVKVGNSGASKPNSSEARETRTPSRDSDRKVFSSKQRRMTDEELKKRGRKKKEAEGEKGRTVPEEQRSVEYAPSYKGPVEIGDRLKVYYGPTHESKVTYEAKVIDMEKDGSEAVYLVHYTGWNTRYDEWIKGLRIAQNFTQAQGRVKRTKATPRPQTPSANSSAKSSKGATAPNAGTGAASTASAQSRRRAQGEAPSGAGSGGGSSSLANSKDSRKDDREGTPATRSTTPSPLTSCISRTKSPATTANSNSRPTRLTRNADFASLAQELGRRTRRTSGHADAMAAEESESEDTDSMESETSAEPEANCQQAQQQQQQRPRSRVKERNRREARRRAESRMKIEETSDAEAEKDAEEPRRGRRLRKTIGKLQEVKSEPESDEEQPKGRDFDLNQIRSELKGFDKAVKLEIASSVEPDQDEEEEEQATTPIKQEKIEPETHAEKKLIPDPADKKRETPKVELPSVANAPIKREPVKLEANAIQPESTEDIYEFKEPEPFEFEVRNKRDSGGSSSGSTADKDKDKDKDKDKDKEKDKDKEKDNSKDKPKKRNFEDDLKSPKKRQKTFGAAAGVAAAAAAVAAAAAATAATAAATPQSTGKVESKTEIGPTEQPIVEAKKKPRKIFKKSEEPEEADAESEDGNSSSRELSKFFPANYSGVMESKRKDAFANSVRAGDETGGAAAPAPAPTENSIESPKKRQPKTFGAAAAKNNSEAKAGESAAGTESVVLDGKKKARKTLNKQTEENEEAEEAASSKELAKFFPNYAGKSLTRKEAFANRKAEENSAKKATDEDAAKNPKKRQKTFGAAGAASKAAEANAVADGATATETKKRQQQQPLSSRLAAASKKLEEAEETDESGSDEAEEPSAGTGKTTRDHATKYFSHYSGPKAKAAAAMANDNDSSLQDRLAAVVAAAAASSKAEAQTRDEPSKLFNSANASSSHDKDDGKTKPGDSAASTSSSLDGKQASTSTDKKRASDSGAPAKPETKQEPKPLDFTPVVPHTVPAPAPISARLPATASIEEKLSAAAVFRSKLKDTKKDEHDSDGSGSSSITPRKTLKDVANKKAETLSAKKAKEKEESLKAKHEPPDKKKQQQQPAVEPQIMPKKDPLQEIEVRKDPLLEVMKKKEEEMTKAKKDAEAKAAAVAAAAAAAAAAAAAAAAVPLPTPSTTVTKTYGSQRKDQAAKLEEAWKKSSILVTAATTTTSATSNTIEKVASAELPNSSSSSEVVVKEYVSVRKETIVSRIKSSIDRDSVDSTDSSDSERRLTIIDSEEFPDDKCNDSSSDVKPKSVAATIVTGGQFNSVAQQGRASPAVAAAVATIQNEMKQQMASVTGIVGGMLQVKSAKMEEDGENLNSLLCEEEIPGSPTPGLETMDHEHRATSSQNLMKSDIGSKMAVAFVAAQLPLSTIPSSTQLTNCAMVTTMSGGVAVPQSTSNLVTVAMTVQHASIQPLRQVQPHPQLLQPLPQPQQPQQQQQQQQQIIHHPQPQAPQAPQIQHPQQQQHHHQQPLQPQPQQQQQQQQHQPQQQHQPQQQQHPHEQHHPAAPLPIAVQQRRESNEAAPVMDNTPPTTPDSSISNISGSPRDERTGGSTPSSSEDNNSKLNRDSSEAENDSTLGRGGKASEDDGSSSLVNSEHNGNGGNGATTSSSSDRLPKPPAKRSSTNDTDGVSPKKRKKRKDQDAAGSSSAGGSCGGSAALASGKKSPRQSARNARHGTGSDSDDTSEGSNQCVNSSTRQTNNGATSGTGPDGPSTSARPPRPTKYNFLVEPDPSLDGPQRLAVLQQNLAELRKTYMNEKVKLAGIERRRKKLKRREREAQKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-