Gjac025673.1
Basic Information
- Insect
- Gasteruption jaculator
- Gene Symbol
- -
- Assembly
- GCA_949825005.1
- Location
- OX463776.1:7343184-7347443[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 3.7 4.2e+02 2.3 0.6 2 20 97 115 97 116 0.94 2 22 0.021 2.5 9.4 1.8 1 21 126 146 126 147 0.93 3 22 0.18 20 6.5 4.5 1 23 161 184 161 184 0.93 4 22 0.22 25 6.2 0.6 1 23 316 339 316 339 0.89 5 22 0.0014 0.17 13.1 0.5 3 20 413 430 411 432 0.93 6 22 0.00034 0.038 15.0 0.3 1 22 472 493 472 493 0.95 7 22 0.0033 0.38 11.9 1.5 2 23 501 523 501 523 0.95 8 22 0.21 24 6.3 3.8 1 23 533 556 533 556 0.93 9 22 0.021 2.4 9.4 0.1 2 20 619 637 618 639 0.94 10 22 0.037 4.2 8.6 2.1 2 23 647 669 646 669 0.94 11 22 0.0091 1 10.5 1.0 2 23 679 701 678 701 0.93 12 22 0.49 56 5.1 0.1 2 20 721 739 720 741 0.92 13 22 0.15 17 6.7 3.7 1 23 748 771 748 771 0.92 14 22 0.045 5.2 8.3 1.9 2 23 781 803 780 803 0.94 15 22 0.00065 0.074 14.2 0.1 1 20 822 841 822 843 0.96 16 22 0.00047 0.053 14.6 2.1 1 23 850 872 850 872 0.97 17 22 0.066 7.6 7.8 1.8 1 23 882 905 882 905 0.95 18 22 0.0025 0.29 12.3 0.1 2 20 957 975 956 977 0.93 19 22 0.035 4 8.7 2.2 1 23 984 1006 984 1006 0.94 20 22 0.31 35 5.7 0.2 1 23 1194 1217 1194 1217 0.96 21 22 0.0072 0.82 10.9 0.3 2 19 1254 1271 1253 1271 0.96 22 22 2.5 2.9e+02 2.8 2.9 1 23 1281 1304 1281 1304 0.91
Sequence Information
- Coding Sequence
- ATGGCCACCACCGAGCAACCAACCGACCAGGTGACTAAACTACCGCCAGATACCGGGAAGACGAACACACGGAAGAAAGGAACCGCGAAAGTCGTCAACAGGAAGAAGGCCAATGGGGgcaaaaggaagaaaaagggggGCACGAAAAAATCGCCCCCTATCGCGACCGCAAAGACACCGAGTCCCCGGGGCCAGAAACGCGCGGCCGATTCCCCGCCGATGAAGATCACCAGGTCGAAACGCCAGAAACTGTCTTCGACCAGCCACAGCGATGACGCGGACGAGAACACCTGCGACGTCTGCCACCTTTGGTTCGAAAGCACCAGCCACTTCGTGGCCCATCGCGGTGACTACGTGATACGAGAGCAGATGAAGCACACGTGCAAGCCCTGCAAGACCCAGTTCAAGCGAAAGCGCCAGCTGGAGTGGCACGCGAGGAGCGCCAAGTGCGGCGACGGCCCGAGCTCGAACCTGCTGCGCTACTTCTGCCACATGTGTAACCAGGGTATGCGCGACAAGAAGAGTCTCCAGGCGCACATCTACCACTTCCACGCATTAGCGGACATCTTCCCGGGCGTAATCCCGGAGAAGCCGGCGAGAGCTGACGCTAAATCGATCCGCAAGAGGAGCGCCAGGAATGAACAGTCACCCAAGGTCAAGAGGAAGCCGGTTGTCAAGGTGAAGGCGGAGCCCGAAGAGGAGCGAGAGGAGGTGTACGAGGGTCAGGTGCTGGAGAAGGTTCAAGTCAAGTTGGGATCACCCGAGCAGATGCGTCAAACTTCCATTGGAGACTCGGTGCCGGATCCCATAGAGGAGGATCTTCCCTTCGTCGGTGACACGCAGTCGCCGGTGACTTGGaacgaagaggaagaaaaccAGCCGGAGCGAGAAGCGAGCGCGACCCGAGACGCGAAGGTGGTCCTGCGGAGAATCGACGCCTCTTTGCATCCGTGTAAGTTCTGCAAGCAGATCTTCGCCAACGAGCGCCAGCGTGAAGCTCACGTGGACCTGGAGCATCTTATCTTCGCGTCCAGCATCTGCGAGGGCAAGTTCCCCACGATGCAGCTGCTGGTGCGGCACTTTCTTGATGAGCACCAGACGACGAAGCCCGAAGTGTGTTGCGTTTGCCAAGAAACCTTCGAAGAAGCCTGCGACTCCCATCACCTGGAGCTGCACTGCCTCGAGGCCTTTGTCGCTACGAGGTCGGAAAAAACCTCGAGGATAAGCGAACTCGCCTGCTCCGGTTGCGACAAGCGCTTCTCCTTTGCCACATGCCTCCAGGTCCACCAGATACAGTGCGAGCCCTGGCAAAAGTACAAACCGACAGTCGCCATGGAGCTGGACGATAGCGCTCCATCGGGTCACGAGGAATCCAAACCCGGGACTGAGGCCTGGGACGGCAACCAGGCGCTCTACCCCTGCGACATCTGTGGCACGCGGTACAGGGACTTCCGGAACCTTTGGCAGCACAAGCAAACGTACGCCGGGGAAATGCGCGAACAGTGCTCCACTTGCGGTCTGCGATTTCCCACCAAGAACCGTCTCCATGCCCACGTCCGGGCCACCCACGACCCCTCCTTCTTCGGCGAGTACAAGTACCGTTGCAAAATCTGCAACCAGGGCTTTGGCCGGTTAGAAAATTGTCGGGTGCACGAAAAGCACCTCCATACCGAGCACGTAGTGGCCCAAAAAACCAACGATCGCGATAAGAAGCTCGTCGAACCGGATCGAGAGTCTGACCAGGAAATGGAGGACTTCGGGCTTGTCTTTGCCGGGTCCTTGGAGAAGCCGATCGTGGAGGTTTCCAACTCCAAAGCCAAGCCCGGCTCGACCCGATACAACGGTGGCCCCCAGGTTTGCGACACCTGCGGCGTGGGCTTCGCGAGCAAGGACGAGTTTCTGCAACATCTGTTCTACTTCGACCCGAAGGAGAGCGTCCAGTGTACCAAGTGTTCGCGCACCTTCAACGGCATGTTCAACCTCGACAACCACCACAAGGCCGAACACGACGTCGACAGCCGCAATTTCCAGCTTTCCTGCAACCGCTGCGACGAGCGCTTCCAGAACCCAGTGTTGCTCAATTCGCACGAGAAGCACGTCCATGAGAACAAATACGTCGTCTCGAAGCAGACGGCCAAGCAGGCGCCCAAGAGCGTCGTTACCTGCAAGACCTGCGGCCTCAATTTCCTCAACTCGGACTTCTTGACCATGCATCGCGCCGAGTATTCCAATGACGGCCCTCACCGATGCGACCGTTGCGATCGTCGCTGCCAAACCCAGGCGTTGCTGGACAAGCACCGGGAGGCGACTCATTCCGACGCCTCGACGCGTCCCAGGTGCAGCTGCAGCCTTTGCGGCGAGGTCACGCGGTCGGAGTTCGCGCTCGAGATTCACGAGCGGCACTTCCACGCGCTCGTGCAACCGCCCGGCAAACGCAAACCGGCCAAGTGGAGGTCGGGCACCTACAAGTGCCCGACCTGCAAGGCCATCTTCGATCGTCGGCAGAACCTGTCGGCGCATCTCATCGATTTCGCCAACTTCGGGGACTTCCACTGCGAGGTCTGCGACCGGCAGTTCACCGACGCTGGCCGTCTCAAGACGCATCGCGAGAAACACGCCAACTTCAACAAGTCCTTCTACGACTTCCGCTGTTTTCTCTGCACCGAGGGATTCTTCACGGAGATGGCGCTCCGCACGCACCAGATACACCTGCATCCGACGCCACCGTCCAACGCCCTGACGCCGCCCTCGCCGTCCTCCTCGCCCTCGGACGAAAGAAACTCCTGTTCCGAGGGATTCCTCAGTGACGCGGAGTCGTCCAGCCCGCAGCCGGCCCCCGAAAACGGCGGCGAGCGGCCCAAGGCCATCCCCTGCAACGTTTGCGGCAACAGCTTTCGGCGCATCAGGGACCTACGCATGCACCAGTACCGGTACCTCAACAACGGCGACTTCATGTGCGACTTCTGCGGGCGTCGTTTCCCCTGGCCCTCGCTTTTCTACCACCACTACGAGAAGCACACAAACCAGAAGTTGCGGGCCAGTCTCAGGCTCAAGTGCTTGGCTTGCGGCGAGCGCTTCGGCAACCTGGCCTCCAGTCGGGCCCATTTCGTCCATATCCACCAGGATCTTTCGAACCAGGGCAATTGGAGGCACATGATAGAATGGACGCCCGAGGGTGATCCGAAAATGGCCCAGTCGGCGGAAGGTCAAAGTGAGCGTACCAACGAGACCGTCGGCTTCGTGGTCCAGAACCAGGGACCCGGGTCTCTGTTGGAGCCCCCGCCTTTGACGGTTCGGAACTCGAACATCGTCGTGCCCACCACGCCCCCGGGCGTAGACCcctcgtcgtcgtcttcgCCGGTTGCGGTACTGCAAGCCGCAACTTTGGGCCCACTCCGGCCACAGCAGGGATCGAAGGGGGTTTCGTTGTTGAAGATTCCCCCGGATCACGGCGTCGTCAAATCAGTTTCGACGGTGCCGCGTAAAACAGGTTTCAATAGCGCCCGAAGGGCTTTGATCCCGGAGCTCAACGGGGCCCAGCCAGGGCTCAAAGTTCCCAGTGACGGTAACACCACCCGCTATGCGTGCGTTAGTTGCGGGAATTTCTACCAGACGATACGGGATCTGGAGAACCACTACCAGATGGTGCACTGGCGGgccacgacgacgacgacgacggagGACCGTGGAGAAGACGCCATCGCTGACCACCAGTATTTCATAAAACCGGCGAGGAACAAACCCGTGCAACGCAACTTGATGTGCATGAAATGCCAGAAGTTCTTCCCGAACCTCGACGACCTCCAGAAGCACGACAAACTCTGCAAACCCCTGGTGGCCCACAAGTGCGAGATCTGCAACACTTACTACTTCGACCCCAAAGCCTGGAAGTGCCATATGGAGTACGCCCACGGGTTCGTCCACACCACGGAGCAGCAGAGGGGCCCGCGGGCCATCCCAGCGGACGGTAAAAGTGGCGGAAGTACTGGAAGGAATGCCCAGAAGGAGGTCCGAGAACGGCGCGAGAACAACATTCACCCCAGGGGAGCGCAGGCCAAGGCCCGAGGGCTTCCCAGTTCGGAGAAGGCTAATACCGTCGAGTCTCGGGAAAAAACCGTGGCAAGCGCCAATGAGAAGAAGAGCGTGGGTGGTTTGCGGGTGCGGCCCTTCGCCAAGATCATCGAGAATCTGGCGCGAGAGTCCGCTAGCCAGAGGGAGAGGCAGAATTGCGCTCTTGGCGAGGGCCCGCAAGATTTTTGA
- Protein Sequence
- MATTEQPTDQVTKLPPDTGKTNTRKKGTAKVVNRKKANGGKRKKKGGTKKSPPIATAKTPSPRGQKRAADSPPMKITRSKRQKLSSTSHSDDADENTCDVCHLWFESTSHFVAHRGDYVIREQMKHTCKPCKTQFKRKRQLEWHARSAKCGDGPSSNLLRYFCHMCNQGMRDKKSLQAHIYHFHALADIFPGVIPEKPARADAKSIRKRSARNEQSPKVKRKPVVKVKAEPEEEREEVYEGQVLEKVQVKLGSPEQMRQTSIGDSVPDPIEEDLPFVGDTQSPVTWNEEEENQPEREASATRDAKVVLRRIDASLHPCKFCKQIFANERQREAHVDLEHLIFASSICEGKFPTMQLLVRHFLDEHQTTKPEVCCVCQETFEEACDSHHLELHCLEAFVATRSEKTSRISELACSGCDKRFSFATCLQVHQIQCEPWQKYKPTVAMELDDSAPSGHEESKPGTEAWDGNQALYPCDICGTRYRDFRNLWQHKQTYAGEMREQCSTCGLRFPTKNRLHAHVRATHDPSFFGEYKYRCKICNQGFGRLENCRVHEKHLHTEHVVAQKTNDRDKKLVEPDRESDQEMEDFGLVFAGSLEKPIVEVSNSKAKPGSTRYNGGPQVCDTCGVGFASKDEFLQHLFYFDPKESVQCTKCSRTFNGMFNLDNHHKAEHDVDSRNFQLSCNRCDERFQNPVLLNSHEKHVHENKYVVSKQTAKQAPKSVVTCKTCGLNFLNSDFLTMHRAEYSNDGPHRCDRCDRRCQTQALLDKHREATHSDASTRPRCSCSLCGEVTRSEFALEIHERHFHALVQPPGKRKPAKWRSGTYKCPTCKAIFDRRQNLSAHLIDFANFGDFHCEVCDRQFTDAGRLKTHREKHANFNKSFYDFRCFLCTEGFFTEMALRTHQIHLHPTPPSNALTPPSPSSSPSDERNSCSEGFLSDAESSSPQPAPENGGERPKAIPCNVCGNSFRRIRDLRMHQYRYLNNGDFMCDFCGRRFPWPSLFYHHYEKHTNQKLRASLRLKCLACGERFGNLASSRAHFVHIHQDLSNQGNWRHMIEWTPEGDPKMAQSAEGQSERTNETVGFVVQNQGPGSLLEPPPLTVRNSNIVVPTTPPGVDPSSSSSPVAVLQAATLGPLRPQQGSKGVSLLKIPPDHGVVKSVSTVPRKTGFNSARRALIPELNGAQPGLKVPSDGNTTRYACVSCGNFYQTIRDLENHYQMVHWRATTTTTTEDRGEDAIADHQYFIKPARNKPVQRNLMCMKCQKFFPNLDDLQKHDKLCKPLVAHKCEICNTYYFDPKAWKCHMEYAHGFVHTTEQQRGPRAIPADGKSGGSTGRNAQKEVRERRENNIHPRGAQAKARGLPSSEKANTVESREKTVASANEKKSVGGLRVRPFAKIIENLARESASQRERQNCALGEGPQDF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -