Basic Information

Insect: Gasteruption jaculator
Gene Symbol: -
Assembly: GCA_949825005.1
Location: OX463762.1:15147891-15151864[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00044 0.05 14.7 0.5 1 23 184 207 184 207 0.96

2 11 0.3 34 5.8 1.6 1 23 231 254 231 254 0.94

3 11 0.077 8.8 7.6 0.1 2 19 324 343 323 345 0.93

4 11 8.5 9.7e+02 1.2 0.3 1 7 356 362 356 370 0.83

5 11 0.5 57 5.1 0.7 2 23 388 410 387 410 0.90

6 11 5.9e-08 6.8e-06 26.9 1.6 1 23 416 438 416 438 0.98

7 11 4.6e-05 0.0053 17.8 0.7 2 23 454 476 453 476 0.94

8 11 3.5e-05 0.004 18.2 0.7 1 23 482 504 482 504 0.98

9 11 0.0012 0.13 13.3 2.2 1 23 510 532 510 532 0.98

10 11 0.00018 0.021 15.9 2.3 1 23 538 561 538 561 0.98

11 11 0.25 28 6.0 0.4 1 23 568 590 568 590 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00044	0.05	14.7	0.5	1	23	184	207	184	207	0.96
2	11	0.3	34	5.8	1.6	1	23	231	254	231	254	0.94
3	11	0.077	8.8	7.6	0.1	2	19	324	343	323	345	0.93
4	11	8.5	9.7e+02	1.2	0.3	1	7	356	362	356	370	0.83
5	11	0.5	57	5.1	0.7	2	23	388	410	387	410	0.90
6	11	5.9e-08	6.8e-06	26.9	1.6	1	23	416	438	416	438	0.98
7	11	4.6e-05	0.0053	17.8	0.7	2	23	454	476	453	476	0.94
8	11	3.5e-05	0.004	18.2	0.7	1	23	482	504	482	504	0.98
9	11	0.0012	0.13	13.3	2.2	1	23	510	532	510	532	0.98
10	11	0.00018	0.021	15.9	2.3	1	23	538	561	538	561	0.98
11	11	0.25	28	6.0	0.4	1	23	568	590	568	590	0.91

Sequence Information

Coding Sequence: ATGAATGGGGAATCTCAGGAAATTTTGGAGGATTCTTCCTACACGAGCTATGAGGTCAATGGCACCAGGTTCGTCCTGCAGAACCTGGAGGACACAGTGGAGACATTGATCAAAGTGGGCAACCAGGTGGGGACAACGGCGACGTCAGAAGAGCAGAATGGTTTCAATAGCTTTCTCCAGGACAGTCTGCAGCTGGAGAAGGAGGAAGATCCAATCTCGCTGGTGTGTCTCGATGGCCAGATATTCGCATTCCACAACGGAAACTTGCAGGAGTTGGACCTGGGCTCGCTCATCGACGGGGGCTCCCAGGAACCGCTGCATTCCATCTCGGAAACCTCCTCGTTGATACTTTCCAAGGACCTGGAGCTAGCCTGTGACGACATCCTCCAGTGTCTGCCGTTGCAGGACGGTCTGACTCTGCAGGATGACAAACAACTGAACAACGAGAATCAGTTCGAATTGGTACCGAATACGCAAGCCGAGAAGAACATTCTCCTGGAGAACCAGAGCAACGTGAATGCGAACGACTTTGTCGAAGTTGTCACGGCTTTCAAGTGCAAAATCTGCCCCTACACGTCGCAGGACAGGGAGCAGCTCCTGAATCACCTGCAAAACGTGCACGTGAATCCAGCCGTGGATGAGGAATTGCAGCATGCAAAGTCTGACACTACTGACGAAGTTAAGCTAGTTTACATGTGTGGAGAGTGTTCTAATTGTTTTGCCACCATTGAAGACTGTAGAGTGCACATGATCAATgacCACCAACTAATGGATCGAAATGTTTTGGATAaatcaattaaacaaaatgGTACGAATTCAGTAACGAATGAGGACTGTGGACTGCTCATAGGTCATACTGGAGATCGCGCTGACGGCAATGGAACTAAGCGACAagttaaaattccaaaagcttTGAATTCCGAGTATATGTTGAATAAGAAGACGATCGAGATCAAAGGAAGCAAAGTCAAGTGCACGTATCGAGGCTGCCCTTATAAATTCAGCAACGAGGAGACTATGCGCCAGCACGCAGCTTGTCACATAGAAACCCAGAATGGGAACAGTTTTAAGTGTAATATTTGTAAAGACGAAAAATTCGCCAAATGGAGACCCTGTAGTTTACATTTATGGAAGAAACACCAAATCGACATCGATCTCTTAACGTGTAAGATCTGCAAGGCCTACAAGAGCGTGACGATGATGAAACTGCTGACGCACATGAGAGTGCACAGCGAATCGCGAGAATACGAATGTCCCGAGTGCGGCAAATGTTTCAAGCAACCCAGTCAGATGAGAAACCATCGCATCATGCACATAGATCGTAAATCCACGGAGACACCTCGCTGGTACACCTCCAAGACCTGCGAGATATGCGGCAAGATCTACGCCGATTCCAAATGCCTGAAGAATCACATACAAGCCGTGCACTCGAAGCTACGACCGTACGTCTGCAACGTCTGCGGACACTCTAGCGCCAGGAAAGCGATGCTGCAGATGCACCTGAGGCAACACACCGGCGACAAGCCCTTCAATTGCGAACTCTGCGACTATAAAACGGGAGATCACAATTCCTTGCGGAGGCACATCATGCGACATACAGgcgTGAGACCGTACAAATGCCCACACTGCCCGTACTCGGCAATCCAGAgcaatagttataaaaatcaCCTGCGCTCAAAACATCCGCTCTTGTCAGGCTTGTTCACCTGCGAACTCTGTCCTTTCAAGACCGTGAAGAAGGAGAGTTATGTTCAACATGTGGGAGATCATGAAAAGGGTCTCATAAAGGCCAGCGCGCAGAAAAAAGACGGGGAAGAGTCGGTGGAGGTGTTTCCGGGTAACATAGCGGCCGCGCAGTTGATTTACAGCTGTCTGGGTGCCTTCTCGAAAGTGGGCAAGACGATAGAGGCCAATCTCATGTCCTCGTCGACGTCCGCTGATGGGACGTCCCAGACCATCACTATCCAAATTCCATCGAAGCATTTGGAAGGATCCTTGCCGACGAACGGTGACACGGACGCGGATAAAACGCAGCATCATTTACCGGCTAATATTGAGCCAGAAGACGACGAGACGATGCACTGTTTCCTGAAAATACCTCGGGAAGAGGAGGAGAATATCGACACCGGTGGTATCACGATACCAGCGGAGTTGGATACCACCAGTGGAAGCGGAAGTGGAATCCGATCGCCCGAAATGAGCCTTTAG
Protein Sequence: MNGESQEILEDSSYTSYEVNGTRFVLQNLEDTVETLIKVGNQVGTTATSEEQNGFNSFLQDSLQLEKEEDPISLVCLDGQIFAFHNGNLQELDLGSLIDGGSQEPLHSISETSSLILSKDLELACDDILQCLPLQDGLTLQDDKQLNNENQFELVPNTQAEKNILLENQSNVNANDFVEVVTAFKCKICPYTSQDREQLLNHLQNVHVNPAVDEELQHAKSDTTDEVKLVYMCGECSNCFATIEDCRVHMINDHQLMDRNVLDKSIKQNGTNSVTNEDCGLLIGHTGDRADGNGTKRQVKIPKALNSEYMLNKKTIEIKGSKVKCTYRGCPYKFSNEETMRQHAACHIETQNGNSFKCNICKDEKFAKWRPCSLHLWKKHQIDIDLLTCKICKAYKSVTMMKLLTHMRVHSESREYECPECGKCFKQPSQMRNHRIMHIDRKSTETPRWYTSKTCEICGKIYADSKCLKNHIQAVHSKLRPYVCNVCGHSSARKAMLQMHLRQHTGDKPFNCELCDYKTGDHNSLRRHIMRHTGVRPYKCPHCPYSAIQSNSYKNHLRSKHPLLSGLFTCELCPFKTVKKESYVQHVGDHEKGLIKASAQKKDGEESVEVFPGNIAAAQLIYSCLGAFSKVGKTIEANLMSSSTSADGTSQTITIQIPSKHLEGSLPTNGDTDADKTQHHLPANIEPEDDETMHCFLKIPREEEENIDTGGITIPAELDTTSGSGSGIRSPEMSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -