Gjac021618.1
Basic Information
- Insect
- Gasteruption jaculator
- Gene Symbol
- Hivep1
- Assembly
- GCA_949825005.1
- Location
- OX463772.1:11597447-11606599[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 8e-05 0.0091 17.0 0.6 1 23 107 129 107 129 0.98 2 9 0.024 2.8 9.2 2.1 1 21 135 155 135 159 0.86 3 9 0.47 54 5.1 0.0 2 21 433 452 432 453 0.90 4 9 1.8e-06 0.0002 22.2 1.6 1 23 1266 1288 1266 1288 0.99 5 9 2e-05 0.0023 18.9 4.4 1 23 1294 1318 1294 1318 0.92 6 9 2.2e-06 0.00026 21.9 0.2 2 23 1971 1992 1970 1992 0.97 7 9 4.7e-05 0.0054 17.7 0.6 1 23 1998 2022 1998 2022 0.92 8 9 0.0027 0.31 12.2 3.0 1 23 2043 2067 2043 2067 0.93 9 9 3 3.5e+02 2.6 1.7 1 19 2255 2273 2255 2278 0.93
Sequence Information
- Coding Sequence
- ATGACAGACCCACAGTTGAcgaacaataacaacaacaataacaacaacaacaacaacaacaacaataacaacaacgatgGCGAACCAAAGTACCTGcacaagaaattcaaaaaaatggcCACGACCGAGGTCGCGACGGCGAAAAATTCCGCTTCCACGGAAATCCCCAAGAGGAGGGACCTCGGGGCCACCACCGTTGCGACGGTTCCGAcgaccaccaccaccaccaccacccccGGCGGGACTACAGTCGCCAAGTGCTCGGAGGCCGCGACGGATCCCGAGAACGATCTCCTGCAGGAGACGAAGAAGAGCGGCTACGTGTGCCCTTACTGCAAGCTCTCCTGCGCCAAACCCAGCGTTCTGCAGAAACATATCAGAGCCCACACCAACGAGAGACCATATCCATGCGTGCCCTGCGGCTTCGCCTTCAAGACCAAGTCCAATCTCTACAAGCACTGCAGGTCCCGTGCACATGCACTCAAGATGGAAGGCGGTGATTCCAGCAAGGTATCCGAGGACTCGGACATAAGTCTCTCGGACAGCGCCAGCAATGGTACCGGAACTCCACCTCCACCGACACCGTCGTCATCCACCGCCTCGACAATCGCAACCGCATCGATATCAACAGTAACAACGACCACATCATCGgtatcatcatcgtcatcgttatcctcatcctcatcattaccatcatcatcgtcatcatcgttGCTGGTATCGGCACCGTCGGTATCGTCATTATCAGGATCATCGGTACCGCTACCGTCCTCGACCACGGCTTCCATCCTCCTGTCCACGTCGAAAACCATAAAAACCGGTAAAATCTACAAGCCAAAGTTCCACACGGCCTTGCAGTGCGTCAACAATGAAACGGAGTCTTCCTCTTCGTCAACTTCCTCGTCCTCATCCTCGTCGCCTTTGTCGTCATCCCCCACGTCCACCGCCGTCAACAATTCCTCGCTTCGACCGAACGTCGAGAAGGTGCAGGAGCACATCGACCGAATCATCACCGACAACCAGGCCATCGTCGAGGCGGTGGACCCGAGGCTGCACAAGTTCATGCAGCGGCAGCAGAGTCTGGTCGAGCCCAAGGCGCAAAACAACGACGTGCCCCTGAACCTGTCCTCCGTCGACGAGatctcgtcctcgtcctcgtcctcccGCAAACGGTGCTACAGCGACACCTTCAACGACCACGCGAGAGCCTCCAAGGACGAGCAGCCTCCGTCCGAGCCCTCGATCATCAAGGACCTGCTTCTGAAGAGCCAGCCCCGGGCGACGAGCGACAACTTCCTCTGCGGCGCCTGCAACATCGCCTACACCAGCATCGACAACCTCGAGGCTCACAAGAAATATTACTGCAAAGGagcgtcctcgtcctcgtcctcgtcctcgttgGCCTCCAAATGCGCCAACGGCAGCCCCAAACGCGGAGAAACCTCCTGCTACCAGCAGCTGGGCGACAAGAAGAGGGACTGCAACGAGTTCGATCAGATGCAAATGAAGTCCTCCCAGGATTACTACAACGTCCTGCAACCCTTGCCCTCGCCGGGCCCGTTATTGGGCACCACGAGGCTCGTCGACGCCTACGTCTCTCCGCCCCCGACCAAGAAATCTCGGCTCACGGAGTCGTCCTCCATCCCCGCGAATTTGAGGTCCCTGGAGGAACTGTCCAAGTACCCGCGGCCCAATTCCCTGCAGATGTTCGGCGGCGAGGTGCGCATCCTCGACAACACGGGCGAGACCAAGACCATGAGGATCGAGCCCAGGCAGAGCAACTCCCCGTCGAGCGGCGGCGAGCACCTGATGAACAACAGCGGCGGCAACGGTGGCGGTAAATGCGGCGCCTCGGAAACGGCCTCCATCGTCGTCAGGTCCGGGCTCCACTCCGGGGGGACGATGGTCCACAAGCCACCCGCGGGGAACTCGTCGTCGACCGGTAGCGGCGCCTCGGGAAGCGGCTGCGGAGCTGGAGCGGGAGGAGCATCGGGGCCCGGGTCGGGAACCGGGGCTGGAACGGGGCCGGGAGGGGGCTCGATCCCGAAAATGCTGGCTCCCATCATACCGAACATATCAACCCCCAGCATCGCGCCCTCCATGTCGTGCTACAACTACCTGGAGCCGCACCTGAACCCCTTGACGGCTTACAACCCCCTGACGCTGCAGCCGCAAGGCGGGATCGCGACGATCCTCCACGCCGGCAAGATGATACCTTACGTGCCTGGAATGCCCGGACCGCATACCCTGTCCGGCGTTCCAACGAGTATCGACATATCACCGAGCCTCTCCAACGGGGACAGCGTCGGCTACAAGGTCATCCCCGGGATGCCGGGCTTGCACTTGATCCAGCAACCGCTGCAGCCGCTGGACCTCGCCAGCCCCGTCAAGACCCCGGCCTGCGTCCCCGGGATCCCGGGGCCCACCAACGACCAGtcgcagttgcagttgcattcGCATTCGCAGCAGCCCCTGGACCTCGCCAGTCCCGCGAAGGAAGGCGccaagcagcagcagcagttgCCGCAGTTCAGGGGCTCCTGCAGCCCCTCGAAAATTCCCAAGCTGGACGGGAGCGCGGGTATGGGCAAATTCCGGAGGTGCCAACAACCCCAGGAGGTGGCCAAGGGCAAGTACAAGCCGGAGGAGGCCCAGAAGTTCCAGTACCCGGTGATCCCGGTCCCGAACGGGATCGACGCCAACGGGAGCGCGCCCAAGAGCTTCGTTTACGGGAAGGTACGGTTCCCCAATGGCACCGAAACGCGGAAACGAGGCGCCGTTTCCGGCTGGGACGCTCTGGCCTCGTTCGACGCCGCGTCGACGACGACCGCGACGACgatgatggcgatgacgaACTCGTCGCCGCCGGAACAACGAGCCGACGCTCGCTGTCCCCTCCCGGAGCCCATACAGGCTTCCTTCCAGGGTGCCAATGGCGCCAAGACCATCTCCGAGGTGACCACGGTCGCGACGACGACGATCGCTGCCACCACTACCACCGGTACCGTCACCACGAGCGCGAATAGCGTCGGAATCGCCACGACGACGACAATGACGACGACCACGACGATGTCCTCGGGGCTCGAGAAGCCTCCGGTGATCCTCGTGAACCTGGACGCCACCAAGGCGGAAGTGCCAAAGAAATGTTCTTCCATAGAAATTATCGAGACGACCAAGTGCGAGGCGAAGGGCAAGAGTCCCCTCGAGGATGACGTCGGTGCCGCGAAAGAGGAGACCCGGAGTTCGaccacgacgacgacgacgaagtTCCTGAGACCGAGCTCGCTGCCCCTGAAGCCGGGGACCTTCACGCCCAAGAAACACCACGGGATCACGCCCACGGCCAACACCCTGCCGCTGATCAGCCCGGAAACGCCGCGGCCCAAGAAGTCCTACGGGCAGTTGTACCTGAATGGGCACGCCTACACGTATTTGGGCCTGAAGTGCTCCACCAGGGTGTTCTACTGCACCTTGAACAAGCCGCAGCCGATGTACGTGACGCAGCAGCACGGCTTGTCCATGTACTCCAACTGGAAGATCTGCAAGGACGTGCCCGCGGACGTGGACATGGTGGACTACGACTCCAGGCACCGGCCGGTCGCCTACACCACCGCCTGGAAGAAGCAGGAGGACATCCTGACCCATTCCTCGCAACGGCCGACCACTCCCAACGACGGCAACGACGGCGGTTCGGAGAACGACTCCCAGGAGAAGAGCAAACGCATCAGGATCTTCGACGGCGGGTTTGAGAGCAACGAGGATTACACGTATGTCAGGGGTAGAgGCCGGGGACGGTACGTTTGCGAGGAATGTGGAATCCGGTGCAAGAAGCCGTCGATGTTGAAGAAACATATCAGAACTCACACGGACGTGCGGCCCTACACCTGCAAACATTGCGTTTTTAGCTTCAAAACCAAGGGCAACCTGACCAAACACATGAAATCCAAGGCCCACTACAAAAAATGCGTGGAACTCGGGGTGATGCCGGTCCCCACCGCGGTCTGCGACGACAACATCGACAAGGAAGCCATCGCCAAACTGGCGGCCGGCGGCGGCTCCACCGAGGACTCGTCCGAGGAAGAGGACGAATCGGACGGCGACGAGAGCGAGGAGTCCGGGAGCGAGGAACACGAGGCCGCGCAGGGTTTGCTGAGTCTCTCGCACCCGAACTCCAGCAGGTTACCCGGTCTGCTGCCGTCCGGGAGACCCACGACCTACCCGTACGCTCTGACCTTCCCGGCGACCTCCATCTCCACGGGGACCACCCAGCCCGTGGCGGCGTCGTCCAACTCCGTGACCTTGAACAACCAGCCCACGACGACCTTGATCCAGAGCGAGCTGTCGCACCGGTACTACTTCCCCTCGAACCGGGCGGTGGAGGAGCcaccgtcgtcgtcgtcgttgtcctCTCGAGGAACCGTCATCCAGTCCTCGAAGAAGGAGGACAGCGACATGGAAGTCGAGGAGCTCACTTCCGTGAGCGCGATTCCGCCCGCGGAGTCGTCCCGGGCGCATATCGCCGCGCAACCGATGGACCTGAGGACGAAACCCGCGCAGTCCTCGCCTCCGGTGACCCCGATGAGCCAAGGTCAACGCATCCAGACGCCGTCCGATATTCTGACCCCCGTCGCGGAGCCGGTGCTGCTCCAAACCATCGTCCAGAGCATGGAGAGGCTGCCGATCCAAGGCAGGGAGTGGAAACCGGACACGGACGGACAGATGCTGCAGGCTTATCTCACGGAGAGGCACGTCATGGACAGCAAGATGAAGCAGCAGTACCGAGTCGGCGCCAATTGCAAGGTCGAgaagcaacagcagcagcaacagcagcaatcCTCGAAGGAGACCCGCCAGGATTTCCAGCGCATCGGGATCGGGATCGGGATCACGAGGGACGTGGAGCTCAACGGCACTCCCACCGTGACCTACACGGACCCGAGCAAGTGCATCGCGGAGCCGAGGCCGAAGGGCAATTCGATGACGAAGCAATCGGACGAGATCAAGCTGGAGATCCGAAACGGCGTCAACAACGCCGAGGGTGGCGTCCCGAGGCAGTTCGAGGACGATCCCGTGGTCGCGCAAGGCCCCAACCGGTTGATCGTGAGTCCCGCCGGGGCCAGGGCGAGCCTGGAACCCCGGGGGGAGTCTCGCTTCTTCCCGGAGAATTACTCGAAACGGCACTTTCAGCCCCAGCAGCAACCGGCGTTTCCGGCCGCGAACAACGTCGCGTTCCCCAAGAACGAGGTCGACCGGAACTCGATGTTCAACGCCATGAAGATGATGAACGAGATGGAGAAGCAGCCGCGCGAGCCGAATTACGAGCAGAGTCGAGCACCGGTGAGCTCCGTCGTCAGGTCAGCGCCGAACGTGGAAAACAGGAGCCAGGAGTTCAAGTTACCGGCTCACCAGGAGCTGAGGCCCCCGAGCAGGGAGTTCAAGCCCGGCGAGTTCCGAATCAATCAGGAGTTCGGCTCGAACGTGCCCCCGCTGGAGATGAGGCAGCAGCAAGGCGAGCAGAGGCCTCCCAGTAGGGAAACCGCCAGGTTGATGCCGGCCGATTATCGGCCGCTTCCGGAGACCAGGCAGCTCGGTTACGAGGCCGGTGGTAGCGCGGCGACGCACAATTCCGGTGCCAAGCTCCAGGATATCTCCATTGGGCAGAACCTGGAGCCGAGGAACGAGAAGAAGCAACACGGGATGGAGCTGACCAAGCAGAGCATCTCCGAGAGCATCAAGCACACGGTTGCGAGGAAGATGGTGGTCGGAGGACCCGGGTTCCGGTCGCTCTCCCCCAATAGCGGTGGGACTGGGAATGGATGTGGGAACAATTCGAAGCCACAAGCGGAGTTCCTGCAACCGTCGAGTGGCCCCCCGCCGAACTACGTGAGCGTCACGGAAGACGGCCGAAGCGTGTGCGGGATTTGCAACAAGGTGTTCAGTAAACCCAGTCAGCTGAAGCTGCACATCAACATCCACTACTTCGAGCGTCCGTTCAGGTGCGAGAGCTGCGGCGTTTCCTTCAGGACCAAGGGCCTTTTGACGAAACACGAGAGATCCGCATCGCACCACaataagGTGAGCATCACCTCGACATTCGGGACAGCGACTACGAGCAATCCGCGACCCTTCAAGTGCTCCGATTGCAAAGTGGCTTTCCGAATTCACGGACACCTGGCGAAGCATCTACGCAGCAAACTGCACATCATGAAACTGGAGTGCTTGGGGAAACTGCCGTTCGGAACTTACGCCGAAATGGAAAGGTCCGGTGTCAACTTGAACGACATCGACACGACTGACTGTGATAATAGCTTGACTAGTCTTCAGATCCTGGCGCAGAAACTGTCGGAGAAGGATCCGAGCAAAATGGGACAGTGGGACAGCGAAAAGGTGCCCAATCAGGGCACGAGTGGCGGAGAAACGTCGTCGGACGAGGGTGAACCCATTCCCTCGCACTCGATGCATCAATACGCAGCAGCCGCGGTGGTTCCTTCTTCGAGTCACGCAACGACGGAGTGCCCGGATGTGTCCAGGACGTACCACAACCCGATGGTCGCCGGGAACGAGGCCGAATGCCCCACATCCTCCGCTCCCATGGTGGAAAATCGGCTGGGAGGAAATTCGCCGCAATTTTTGCAGCAGAACCGGTCGCGAGAGAGCAACGCCAACAAGAAAAATCGGCTGAATCTGTCGCCGACGTGCCAGGTTCCCTGCGTCGACGAAACCCCGAAACCCAAGACCGAGGACGGCAACGGCTCGCAATTGTACCGGTGCCATTTGTGCTCGGTTAGCGCGCGGACCGTCAACGAACTGCAAGTGCATTGCTTCATCGAGCATAATATCGAATCGGGGGACAAAAGTGCCAGCGACAAGCAGAATACTCAAATCAGGACCCCGGTTCACGAGGAAATCATCGCCAGGGAGGATCGGTATCTCCGACAAACGTCCGTCGATGACACGTAG
- Protein Sequence
- MTDPQLTNNNNNNNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVATAKNSASTEIPKRRDLGATTVATVPTTTTTTTTPGGTTVAKCSEAATDPENDLLQETKKSGYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHALKMEGGDSSKVSEDSDISLSDSASNGTGTPPPPTPSSSTASTIATASISTVTTTTSSVSSSSSLSSSSSLPSSSSSSLLVSAPSVSSLSGSSVPLPSSTTASILLSTSKTIKTGKIYKPKFHTALQCVNNETESSSSSTSSSSSSSPLSSSPTSTAVNNSSLRPNVEKVQEHIDRIITDNQAIVEAVDPRLHKFMQRQQSLVEPKAQNNDVPLNLSSVDEISSSSSSSRKRCYSDTFNDHARASKDEQPPSEPSIIKDLLLKSQPRATSDNFLCGACNIAYTSIDNLEAHKKYYCKGASSSSSSSSLASKCANGSPKRGETSCYQQLGDKKRDCNEFDQMQMKSSQDYYNVLQPLPSPGPLLGTTRLVDAYVSPPPTKKSRLTESSSIPANLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQSNSPSSGGEHLMNNSGGNGGGKCGASETASIVVRSGLHSGGTMVHKPPAGNSSSTGSGASGSGCGAGAGGASGPGSGTGAGTGPGGGSIPKMLAPIIPNISTPSIAPSMSCYNYLEPHLNPLTAYNPLTLQPQGGIATILHAGKMIPYVPGMPGPHTLSGVPTSIDISPSLSNGDSVGYKVIPGMPGLHLIQQPLQPLDLASPVKTPACVPGIPGPTNDQSQLQLHSHSQQPLDLASPAKEGAKQQQQLPQFRGSCSPSKIPKLDGSAGMGKFRRCQQPQEVAKGKYKPEEAQKFQYPVIPVPNGIDANGSAPKSFVYGKVRFPNGTETRKRGAVSGWDALASFDAASTTTATTMMAMTNSSPPEQRADARCPLPEPIQASFQGANGAKTISEVTTVATTTIAATTTTGTVTTSANSVGIATTTTMTTTTTMSSGLEKPPVILVNLDATKAEVPKKCSSIEIIETTKCEAKGKSPLEDDVGAAKEETRSSTTTTTTKFLRPSSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNKPQPMYVTQQHGLSMYSNWKICKDVPADVDMVDYDSRHRPVAYTTAWKKQEDILTHSSQRPTTPNDGNDGGSENDSQEKSKRIRIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCVFSFKTKGNLTKHMKSKAHYKKCVELGVMPVPTAVCDDNIDKEAIAKLAAGGGSTEDSSEEEDESDGDESEESGSEEHEAAQGLLSLSHPNSSRLPGLLPSGRPTTYPYALTFPATSISTGTTQPVAASSNSVTLNNQPTTTLIQSELSHRYYFPSNRAVEEPPSSSSLSSRGTVIQSSKKEDSDMEVEELTSVSAIPPAESSRAHIAAQPMDLRTKPAQSSPPVTPMSQGQRIQTPSDILTPVAEPVLLQTIVQSMERLPIQGREWKPDTDGQMLQAYLTERHVMDSKMKQQYRVGANCKVEKQQQQQQQQSSKETRQDFQRIGIGIGITRDVELNGTPTVTYTDPSKCIAEPRPKGNSMTKQSDEIKLEIRNGVNNAEGGVPRQFEDDPVVAQGPNRLIVSPAGARASLEPRGESRFFPENYSKRHFQPQQQPAFPAANNVAFPKNEVDRNSMFNAMKMMNEMEKQPREPNYEQSRAPVSSVVRSAPNVENRSQEFKLPAHQELRPPSREFKPGEFRINQEFGSNVPPLEMRQQQGEQRPPSRETARLMPADYRPLPETRQLGYEAGGSAATHNSGAKLQDISIGQNLEPRNEKKQHGMELTKQSISESIKHTVARKMVVGGPGFRSLSPNSGGTGNGCGNNSKPQAEFLQPSSGPPPNYVSVTEDGRSVCGICNKVFSKPSQLKLHINIHYFERPFRCESCGVSFRTKGLLTKHERSASHHNKVSITSTFGTATTSNPRPFKCSDCKVAFRIHGHLAKHLRSKLHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLTSLQILAQKLSEKDPSKMGQWDSEKVPNQGTSGGETSSDEGEPIPSHSMHQYAAAAVVPSSSHATTECPDVSRTYHNPMVAGNEAECPTSSAPMVENRLGGNSPQFLQQNRSRESNANKKNRLNLSPTCQVPCVDETPKPKTEDGNGSQLYRCHLCSVSARTVNELQVHCFIEHNIESGDKSASDKQNTQIRTPVHEEIIAREDRYLRQTSVDDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -