Basic Information

Insect: Gasteruption jaculator
Gene Symbol: gtf3a
Assembly: GCA_949825005.1
Location: OX463774.1:7518723-7524344[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.8e-05 0.0067 17.4 0.4 1 23 850 872 850 872 0.98

2 16 0.6 69 4.8 0.5 1 14 878 891 878 894 0.87

3 16 0.00029 0.033 15.2 1.5 3 23 935 956 934 956 0.98

4 16 0.0045 0.52 11.5 1.5 1 23 963 986 963 986 0.95

5 16 0.00011 0.013 16.5 0.7 1 23 992 1015 992 1015 0.94

6 16 0.18 20 6.5 2.7 2 23 1023 1043 1023 1043 0.97

7 16 3e-06 0.00035 21.5 0.8 2 23 1049 1070 1048 1070 0.97

8 16 2.7e-06 0.0003 21.7 0.2 1 23 1076 1098 1076 1098 0.99

9 16 0.00075 0.086 13.9 2.1 2 23 1110 1132 1109 1132 0.95

10 16 0.053 6.1 8.1 2.5 1 23 1138 1161 1138 1161 0.95

11 16 0.022 2.6 9.3 3.0 3 23 1214 1235 1213 1235 0.95

12 16 0.0016 0.19 12.9 0.8 2 23 1242 1264 1241 1264 0.96

13 16 0.00015 0.017 16.2 1.1 2 23 1272 1293 1271 1293 0.96

14 16 0.0014 0.16 13.1 2.3 1 23 1299 1322 1299 1322 0.96

15 16 0.39 44 5.4 3.2 2 23 1329 1350 1328 1350 0.96

16 16 0.027 3.1 9.0 2.0 1 23 1356 1378 1356 1378 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.8e-05	0.0067	17.4	0.4	1	23	850	872	850	872	0.98
2	16	0.6	69	4.8	0.5	1	14	878	891	878	894	0.87
3	16	0.00029	0.033	15.2	1.5	3	23	935	956	934	956	0.98
4	16	0.0045	0.52	11.5	1.5	1	23	963	986	963	986	0.95
5	16	0.00011	0.013	16.5	0.7	1	23	992	1015	992	1015	0.94
6	16	0.18	20	6.5	2.7	2	23	1023	1043	1023	1043	0.97
7	16	3e-06	0.00035	21.5	0.8	2	23	1049	1070	1048	1070	0.97
8	16	2.7e-06	0.0003	21.7	0.2	1	23	1076	1098	1076	1098	0.99
9	16	0.00075	0.086	13.9	2.1	2	23	1110	1132	1109	1132	0.95
10	16	0.053	6.1	8.1	2.5	1	23	1138	1161	1138	1161	0.95
11	16	0.022	2.6	9.3	3.0	3	23	1214	1235	1213	1235	0.95
12	16	0.0016	0.19	12.9	0.8	2	23	1242	1264	1241	1264	0.96
13	16	0.00015	0.017	16.2	1.1	2	23	1272	1293	1271	1293	0.96
14	16	0.0014	0.16	13.1	2.3	1	23	1299	1322	1299	1322	0.96
15	16	0.39	44	5.4	3.2	2	23	1329	1350	1328	1350	0.96
16	16	0.027	3.1	9.0	2.0	1	23	1356	1378	1356	1378	0.98

Sequence Information

Coding Sequence: ATGTTAGATCGCGTTACTGCGTCCCCAATTGCCGCCATATTTATTTGCAAGCCAGCTGTCTCGGCTTCCCCCGATAAACAGCGCGGGGAACAATCTCGCACTCGGGGCACTCCGGGAACTCCGGGTGCTCGGTCCGATGCCCGAGGAGAGGCTCTTCTCCGGGAACTCGCCTCCAAGTTGAGCATGAACCGCTCCAAGGAAGCCCTGGTCTACGTCTCCtacgaagaagaagaggaagaagaagaagaatcggAAGAGGATGAGGAAAATAACCTTAAGTTGACCTTCATTCAAACCATTCCAGGAAACAacaccaataataataataataataacaacaataacaataacagcagCAGGACCGAGGCCACTATGTTACTGGACGCCGTCTCTAAGAACTTCGGCTTCGAGTCCGAAGACGAACACGAAAGAAGCTACAACCCTCCGTTGCCCAAACCGACCCCCCCTAAACGTCGCGACTCCAATCGAGTCGTATCTCGAGTCAGAAATATCAGCGAGTTGAAGAAGATCGCCCCCAAGGTGAAGCTCTTGGCTCGAGAGATCACGAGCCTTAGCGAACTGACCAAAGCCAACTGCCAGAACCAAGAGTGCCCGACTCCTCAGAGCGCGACGGCTAGACCCAAGAAAGAGGAGGAATCGTCCCTCGTTCAGGATGCGAAGAATCATTTGAATAAGTACTGCAGAACCTGCGCGGGGCTCAAAATCCCTCTAGTGGACATCTTCGGCGAGAAGGGCGTGCAGATGAGGTTGGAACAGCAGATGAAGCACCTGGAAGAGGTACGTCGACAGGACGGTCTGTCGACGCAGATGTGCATGGACTGCATCTGCGATCTAAAAATGAGCTACAAGTTCTTCATGCAAATTAAAAAGGCCCAGGTGAAGCTGAAGTCCGTTCACGCGTCCCTCAAGGATTCGTCGACGGGGAAGAAGGAGGCAACGAACAACGGGGTGCTGATGAAATCGGAGGAACAGCAAATTCAAAATCAGCGATCGCAGTCGCAGTCGCAATTCGTGGCTCGAGAGAACCCGCCACAGAAGGTGGAAGTAGCAGAAGCGAACAACGAGGAGAACGAAGACTCCATCGAGGAGTTCGACCCCGAGGATCATGCCGAAATCCCGCCAGAAAGCAGCGATTGGATGGAGTCAGAGATGGAGTTTGCCCAGAGTCCAAATAACGTACTACTCCCGAAGAAGGAGGAAAACACACCCGCTCTGATAACCTACAGTTACGAGGAACAGCCGACAGCCTGTTCGATCAAGgaagagcagcagcagcaacagcagcagcaacagcagcagcagcagcagcagcagcaggagcagcagcagcagcatgcGAATCTGGATCTAGACCCGAACCTGAATTCAAAACTGATCGTACCAGAGATTGACGCCACGAATCAAGGAGACACGGaagtttcaataataatgGAGAAGGTCGAACCGATGAGTAGGGAAGAGAAAGTCAGAGAGAATCTGAAACATCCGaatattctgaaaaagaaGTTACCGGTGGCCCAGAGAAAGTCCATCGACGCGGTGAACATCACCCACACGGATCAAGATGGAATCATGTATGTGACCGTGAAGGGCTCGAAGCCCAACGAATTGTTGTTGGTGAAGGTCAAGAAAATGGATAAGAGTGTAAACCAGGACGCAAAGCCGAAAGAGGTGTCGGTGCCCACGAAGTTCGATATCAAACCGGTGGAGAAGATTCTGAGGAGGTACGAGTCGCTGGTGGCGAAAGAGAAGGACCTGTTTCCGGAGCGAGGTAGGAAACTGGATATCCGTGAGCAGATTATAGAAGAGCAGATCGAGCAGTACAAGAAGAAGCGGGAGATGCTATTGGGATCCGGAGTGAAGATCGAGGCATGCCAGCCTCGATACATCCGGCAGAACGATCCTCCATCGCCGGAGCCCGAAAAGGAGACAAACGGTATTGGCGATGGAAGTAATTTGAACACTAGTGGTATCGGCGAGGATGTGTCGGTAAAGAACGAGCTGATGCAGAGCCACGACTTCGaggaaaacattatttatatgGAGGTGGAAGACCACGAGATGGAGGTAGAGCAGGAACATGAGCAAAAGCGGAAGGTCGAGGATGAGAGGAGTCAGGACGAAGCGGAGAATATGGAGGATACGGCTGTCATCGATCTGCTTAGAGCGAAGTGGGGCGAGTGCCCAAAACCCAAGGAGGACGAGCCAGAGGAGGAGCCGGAGGACGAACCCTCTTCGATTCTCCTTCCCGGTGGGGACGACTTCGAGGAGGATTACCAGGTGGAGGAACCCTTGGGCGAGGACGTTGGCGTTGACGAAGTCGAGAGCAACCGACGAGACCTGGAGAAGCTGACGAAGGTCCTGGGGGAGAAGGACGAGCCTCTGCTCACCGAATTCCAGGAGTACCTGAAACACCGAAAGATCGTGGTCCCGAGGCTCAAGGACGAGGACATAAGGAGCTTGTTCGGTAAAGTGCGCGCAGCTGCGGGGGAGTCGTGGGACGCCATCGAGCACCTGGAGGGGGATTTCGAATGCGACTACTGCCTGGAGACCTTCGACACGAGGGACAACTTGGAAGAGCACGAGAAAATGCACGACTTTCGACTGATGCACTTCTGCGAGGACTGCGGCCAGGAGTTCCCCACCAATAAAGCCAAGCGCTGCCACAACGTGACCTGCATCAACAAGCTCCTGTGCAAGTACTGCAACACCTTGTTGGACTCCAAGGGTAAGAAGCGCCAGCACGAGCAGAAGCACTGCGACAGCATCTACGGGCAGCTGTGCGAAGTCTGCGGCGAGAAGTTCAAGCACCAGGGCACCCTGGACCAGCACTACAAGACGCAGCACATGAACTGGGAGAAGGTGTTCCAGTGCCCCATGTGCCCCAAGAAGTTCGCGTTCAAGCAGAAGCTGAGCTTCCACTTGAAATCGGTGCATACGACGCTCAGGGCGTACCTGTGCGAGGACTGCGGCGCGGATTTCAAGAACCCGGCCAGTCTGAGGCACCACCGCATCCGGAAGCACCAGCCCATCGGCAACAAGCGCGAGTGCCCGGTGTGCCACAAGATGGTGCCTTTCTACAGCCTCTCCAAGCACATGCACACGCACAAGGCTTACTCCATCCAGTGTCCGCAGTGCGAGAAGATGTTCAAGAACACGTCGACCTTGAAGCAGCACGTGAGGATCCACGAGGACCAGAGGCAATACCGATGCGACACCTGCGGGGTGGGCTTCAATCGGCGCGACGGCCTGAGATTGCACATGCGAGTGCACCAGAAGAGCGACAGCCGCGGTCTCAAGGAGTGCTCGTGCCAGGTTTGCGGCGAGAAGTTCCCCAATCATTCCATGCTGGTGATTCACCGCAACCGGGTGCACAAGGACGGGAGGCAGTACACCTGCCACATCTGCAACCGGTCCATGATCTCCACCAGGTCTTTGGACTGGCACATGTCGCACATCCACAACCAGGTCAAGCCCGAGCTGGGTTTCCCCCTCATCCCGAAGAACGAGTTCCAGGACGAGACCATCACCCTGGACAAGGACAGCCGCGAGCCTTCGAAGGATACTTCGATGGGAGGCAGCACCGGTGGCTCTCCCTCGGAGAAGAAACGCGTGGCTTGCTACCACTGCAACAAGACCTTCAAGACGGAGATGATCCTGAGGACGCACATCAAAAACACGCACGTGGAGAAGGACCGCATGAAGTGCCTGGACTGCGAGGAGACCTTCACCTCGGACGTGAGGCTGAGGCACCACATGATGGTGGCCCACAACCGGCTGGAGGGCACCCTGGAGTGCCCCCATTGCCCCAAACGCTTCGTCAATCAGCTTCGACTGAAGACGCACCTGATCTCGCACTCCGAGGAGCGACCCTACACCTGCGAGATCTGCGGGTTCAACCTCAAGACCAAGATCCAGCTGATCAAGCACCACCAGAACCGACACAGCGACGAGCGACCCCTGCAGTGCCGATACTGCCCATGGAGGTGCAAGCAGGTCAGCGCCTTGGTGTGTCACGAGAGGACCCACACCAACGAGCGACCCTACTCCTGCGTGGTCTGTCGCCAGAGGTTCAAGTACCTGGGGGACAAGAACAAGCACGAGAGGAGGCACGAGAGCCTCGGGGGCTCGGGATTCAAGAGGATCGTCTCCGGGAGGAACGCGAAGCCGATCAAGAGCGCGCCCGAGGAGGATggagaggaggaagaggaggaggagaacaGTTCCGAGGTGGTTTCCTGCTCGTACCCGGAGGAAGCGACTTTCGTCGACGGGGAGATCGTCAAGTTCGAGTCCCAGGGAAAACGGGAGCTGATGGgacaggaggaggaggaggaggaagacgagGAAGAAGAGTACGAGGAGGATCATCGGGGGAATGAGAACGAGAACGAAAGGGGAGAGTCGAGGGATTCCTCGGGGGAAGTCCCGGTGACGAATATCGGCTCCCAAGAGTGCCCCCAGATGCTGGTGTTCCAGGAGTACGAGGAAACCTCGAGGGAGGCCTCGGAGGCCGCCGAGGTGATCATGAACATGGAGGATACGATAGTTTATACCGAGGAGGTGACCGCGGACAATATCGAGGGCGCCGAGATGATCACCGACGAGATCATGTCCAATCAGATTCTCCAGAGTGGGACCGTGGTGCATCTGCAGCAGCAGGACGACACCGGGAAGATACAGGTCATCCCGGTGATGCTCTCGTTGCCGAATTTGACCGATGCCAATGCAGAAGTCAACCTCGCCACTGCTTctattatgtataataattga
Protein Sequence: MLDRVTASPIAAIFICKPAVSASPDKQRGEQSRTRGTPGTPGARSDARGEALLRELASKLSMNRSKEALVYVSYEEEEEEEEESEEDEENNLKLTFIQTIPGNNTNNNNNNNNNNNNSSRTEATMLLDAVSKNFGFESEDEHERSYNPPLPKPTPPKRRDSNRVVSRVRNISELKKIAPKVKLLAREITSLSELTKANCQNQECPTPQSATARPKKEEESSLVQDAKNHLNKYCRTCAGLKIPLVDIFGEKGVQMRLEQQMKHLEEVRRQDGLSTQMCMDCICDLKMSYKFFMQIKKAQVKLKSVHASLKDSSTGKKEATNNGVLMKSEEQQIQNQRSQSQSQFVARENPPQKVEVAEANNEENEDSIEEFDPEDHAEIPPESSDWMESEMEFAQSPNNVLLPKKEENTPALITYSYEEQPTACSIKEEQQQQQQQQQQQQQQQQQEQQQQHANLDLDPNLNSKLIVPEIDATNQGDTEVSIIMEKVEPMSREEKVRENLKHPNILKKKLPVAQRKSIDAVNITHTDQDGIMYVTVKGSKPNELLLVKVKKMDKSVNQDAKPKEVSVPTKFDIKPVEKILRRYESLVAKEKDLFPERGRKLDIREQIIEEQIEQYKKKREMLLGSGVKIEACQPRYIRQNDPPSPEPEKETNGIGDGSNLNTSGIGEDVSVKNELMQSHDFEENIIYMEVEDHEMEVEQEHEQKRKVEDERSQDEAENMEDTAVIDLLRAKWGECPKPKEDEPEEEPEDEPSSILLPGGDDFEEDYQVEEPLGEDVGVDEVESNRRDLEKLTKVLGEKDEPLLTEFQEYLKHRKIVVPRLKDEDIRSLFGKVRAAAGESWDAIEHLEGDFECDYCLETFDTRDNLEEHEKMHDFRLMHFCEDCGQEFPTNKAKRCHNVTCINKLLCKYCNTLLDSKGKKRQHEQKHCDSIYGQLCEVCGEKFKHQGTLDQHYKTQHMNWEKVFQCPMCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPIGNKRECPVCHKMVPFYSLSKHMHTHKAYSIQCPQCEKMFKNTSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKSDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMISTRSLDWHMSHIHNQVKPELGFPLIPKNEFQDETITLDKDSREPSKDTSMGGSTGGSPSEKKRVACYHCNKTFKTEMILRTHIKNTHVEKDRMKCLDCEETFTSDVRLRHHMMVAHNRLEGTLECPHCPKRFVNQLRLKTHLISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCVVCRQRFKYLGDKNKHERRHESLGGSGFKRIVSGRNAKPIKSAPEEDGEEEEEEENSSEVVSCSYPEEATFVDGEIVKFESQGKRELMGQEEEEEEDEEEEYEEDHRGNENENERGESRDSSGEVPVTNIGSQECPQMLVFQEYEETSREASEAAEVIMNMEDTIVYTEEVTADNIEGAEMITDEIMSNQILQSGTVVHLQQQDDTGKIQVIPVMLSLPNLTDANAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -