Basic Information

Insect: Gasteruption jaculator
Gene Symbol: -
Assembly: GCA_949825005.1
Location: OX463763.1:1455347-1471298[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0004 0.045 14.8 4.1 1 23 189 211 189 211 0.97

2 11 1.2e-05 0.0014 19.6 1.5 1 23 217 239 217 239 0.98

3 11 0.00092 0.11 13.7 3.8 1 23 245 268 245 268 0.95

4 11 0.012 1.4 10.1 5.2 1 21 274 294 274 296 0.95

5 11 0.00012 0.014 16.4 1.9 1 23 302 324 302 324 0.99

6 11 1.5e-05 0.0017 19.3 0.4 1 23 330 352 330 352 0.98

7 11 0.00031 0.036 15.1 1.4 1 23 360 383 360 383 0.97

8 11 3.3e-05 0.0038 18.2 2.6 2 23 390 411 389 411 0.97

9 11 0.00012 0.014 16.4 0.3 1 23 417 439 417 439 0.99

10 11 0.0033 0.37 11.9 7.3 1 19 445 463 445 468 0.91

11 11 6e-07 6.9e-05 23.7 1.8 1 23 482 504 482 504 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0004	0.045	14.8	4.1	1	23	189	211	189	211	0.97
2	11	1.2e-05	0.0014	19.6	1.5	1	23	217	239	217	239	0.98
3	11	0.00092	0.11	13.7	3.8	1	23	245	268	245	268	0.95
4	11	0.012	1.4	10.1	5.2	1	21	274	294	274	296	0.95
5	11	0.00012	0.014	16.4	1.9	1	23	302	324	302	324	0.99
6	11	1.5e-05	0.0017	19.3	0.4	1	23	330	352	330	352	0.98
7	11	0.00031	0.036	15.1	1.4	1	23	360	383	360	383	0.97
8	11	3.3e-05	0.0038	18.2	2.6	2	23	390	411	389	411	0.97
9	11	0.00012	0.014	16.4	0.3	1	23	417	439	417	439	0.99
10	11	0.0033	0.37	11.9	7.3	1	19	445	463	445	468	0.91
11	11	6e-07	6.9e-05	23.7	1.8	1	23	482	504	482	504	0.98

Sequence Information

Coding Sequence: ATGGTCACGGTTTTGCAACAAGTTGAAGGCTTATCGGGTGGAGAAGAGGGTGGCACGTATTTTGTGGATCAGTCAGGGCAGTATTATTACCAAGCGAGCAGTGATGAAGCACCTGTTATGACACAAGTGCAAATACAAGAAGTCGATGAAAGCGATCGGCAGGAAGAAGAAGGTACGCAGGAAGAACAATATCATGAAATCGATGAATTGGAGCAGGTGGAAGGAGAAGAGGATCAAGTGACAAATGCAGACGGCAATCAAGTGGTGATCAATTCTGAAGATGCATATCAAACAGTGACAATCGTACCATCCGATACAAATCCTGGAGAAGTTAGCTATGTGTTAATAGTACAACAACCCGAAGCAGATGAAAAGGGCGGTCGACAAGCCGATGGGGATCATGAAGATGgcgaagaaggagaaggagaacaGGATCAAGACCTTACTGTTTATGATTTTCAAGATAATGAAGATAATGATGCACCTATGGAATCCGAAGCTGAAGacgacaaaacaaaaattgtcaaatttatcCCAAAGAAATCACAAACGGTCACACAAGCTCATATGtgtaattattgcaattacaCAAGCCCGAAACGgtACCTTCTATCTCGGCATATGAAATCTCATTCGGAAGAACGACCACATAAGTGTAGTGTTTGCGAAAGAGGTTTCAAAACTTTGGCTTCTCTTCAAAATCATGTGAATACTCACACTGGGACCAAGCCGCatcattgtaaattttgtgacAGTGCTTTCACTACCTCTGGTGAACTTGTGAGACATGTTCGGTACAGACATACCCACGAAAAGCCGCACAAATGCCACGAATGTGATTATGCGTCAGTTGAGTTATCCAAACTCAAGCGTCATATTAGATGTCATACTGGAGAACGGCCGTATCAGtgtccTCATTGCACATATGCGAGTCCAGACACCTTCAAGTTGAAACGTCATTTGCGCATTCATACTGGGGAAAAGCCATACGAATGTGATATTTGCCAAGCAAGATTCACGCAGTCAAACAGTTTAAAAGCCCACAAACTTGTCCATAATGtCGGTGATAAACCCGTATTCCAATGCGAGTTGTGTCCTACAACATGCGGAAGAAAAACGGATCTTAGAATTCATGTACAAAAGTTACACACGTCCGATAAACCACTAAAGTGTAAACGATGTGGGAAGACATTCCCCGATAGATACAGTTACAAGTTACATAGTAAAACGCACGAGGgtgaaaaatgttacaaatgtGATCTCTGCCCGTATGCCTCAATATCTGCCCGTCATCTTGAAAGTCATATGCTTATTCATACGGATCAAAAGCCATATCAATGCGATCATTGCTTTCAATCATTTAGGCAAAAGCAATTGCTCAAACGACATTGCAACCTCTACCACAATCCGTCTTATGTTCCTCCACCACCACAGGAAAAGACACACCAGTGTCCGGAATGTGAAAAACTGTTTAGGCATAAAGGTAATCTCATCAGACATATGGCTGTTCACGACCCAGAGTCTTCGCTTCAAGAGAAACAACAAGCTCTTAAAAttggaagacaaaaaaaaattcaaattatcgaTGGTCAACGGGTTGAAGTTATGACagGTGATTTATCTTCTAAAATTAAAGGTTTCGAGGACgaggaagacgaagaagacgaagaagacaTGATGGCTGTGGAGGGCAGCGATGGCCAGCAGTATGTTGTATTGGAAGTTATTCAACTTGCCGATAATCAAGGAACTGATCAGATGGCTGTTGTTGCAAACGAGGATGGCGATCTAGTGATGCAAGATCCTCTAAGTCAAGATGGTACAATTGTCACGGGAAGCGTCGAAGACGCCGAGGAAGAGACGGCGTTGCCAGATGTGAAAATCGAAGCCGTTCCACTTTCCAGTAAAGGATCCAATCAAGGTTCCCAAGCTgatccaaaattacaaaaagaaatggaaacttGTTTTGGCTTCGACGAGGTAAAGTATAACAGTAAATTTTTACGTACCTTAACCCCATGA
Protein Sequence: MVTVLQQVEGLSGGEEGGTYFVDQSGQYYYQASSDEAPVMTQVQIQEVDESDRQEEEGTQEEQYHEIDELEQVEGEEDQVTNADGNQVVINSEDAYQTVTIVPSDTNPGEVSYVLIVQQPEADEKGGRQADGDHEDGEEGEGEQDQDLTVYDFQDNEDNDAPMESEAEDDKTKIVKFIPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKFCDSAFTTSGELVRHVRYRHTHEKPHKCHECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICQARFTQSNSLKAHKLVHNVGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKTFPDRYSYKLHSKTHEGEKCYKCDLCPYASISARHLESHMLIHTDQKPYQCDHCFQSFRQKQLLKRHCNLYHNPSYVPPPPQEKTHQCPECEKLFRHKGNLIRHMAVHDPESSLQEKQQALKIGRQKKIQIIDGQRVEVMTGDLSSKIKGFEDEEDEEDEEDMMAVEGSDGQQYVVLEVIQLADNQGTDQMAVVANEDGDLVMQDPLSQDGTIVTGSVEDAEEETALPDVKIEAVPLSSKGSNQGSQADPKLQKEMETCFGFDEVKYNSKFLRTLTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00730251;
90% Identity: -
80% Identity: -