Basic Information

Insect: Gasteruption jaculator
Gene Symbol: -
Assembly: GCA_949825005.1
Location: OX463771.1:8774772-8777222[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00082 0.094 13.8 1.3 1 23 99 121 99 121 0.99

2 16 0.029 3.3 9.0 1.7 1 23 161 184 161 184 0.96

3 16 0.012 1.4 10.2 1.6 2 23 196 217 195 217 0.91

4 16 0.023 2.6 9.3 5.9 1 23 225 248 225 248 0.97

5 16 0.014 1.6 9.9 1.9 1 23 260 282 260 282 0.98

6 16 0.36 41 5.5 2.7 2 20 291 309 290 313 0.88

7 16 0.00097 0.11 13.6 3.7 1 23 324 347 324 347 0.97

8 16 0.012 1.3 10.2 2.0 1 23 360 383 360 383 0.97

9 16 0.00026 0.03 15.4 3.9 1 23 398 421 398 421 0.97

10 16 0.045 5.2 8.3 2.0 1 23 435 458 435 458 0.95

11 16 1.5e-06 0.00017 22.5 1.2 1 23 464 487 464 487 0.96

12 16 0.015 1.7 9.9 0.8 3 23 494 515 492 515 0.94

13 16 0.00017 0.019 16.0 0.6 1 23 520 543 520 543 0.97

14 16 9.7e-09 1.1e-06 29.3 0.7 2 23 550 571 549 571 0.97

15 16 1.3e-06 0.00015 22.7 0.4 1 23 577 599 577 599 0.98

16 16 4.5e-07 5.1e-05 24.1 0.1 1 23 605 627 605 627 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00082	0.094	13.8	1.3	1	23	99	121	99	121	0.99
2	16	0.029	3.3	9.0	1.7	1	23	161	184	161	184	0.96
3	16	0.012	1.4	10.2	1.6	2	23	196	217	195	217	0.91
4	16	0.023	2.6	9.3	5.9	1	23	225	248	225	248	0.97
5	16	0.014	1.6	9.9	1.9	1	23	260	282	260	282	0.98
6	16	0.36	41	5.5	2.7	2	20	291	309	290	313	0.88
7	16	0.00097	0.11	13.6	3.7	1	23	324	347	324	347	0.97
8	16	0.012	1.3	10.2	2.0	1	23	360	383	360	383	0.97
9	16	0.00026	0.03	15.4	3.9	1	23	398	421	398	421	0.97
10	16	0.045	5.2	8.3	2.0	1	23	435	458	435	458	0.95
11	16	1.5e-06	0.00017	22.5	1.2	1	23	464	487	464	487	0.96
12	16	0.015	1.7	9.9	0.8	3	23	494	515	492	515	0.94
13	16	0.00017	0.019	16.0	0.6	1	23	520	543	520	543	0.97
14	16	9.7e-09	1.1e-06	29.3	0.7	2	23	550	571	549	571	0.97
15	16	1.3e-06	0.00015	22.7	0.4	1	23	577	599	577	599	0.98
16	16	4.5e-07	5.1e-05	24.1	0.1	1	23	605	627	605	627	0.98

Sequence Information

Coding Sequence: ATGGTAGATGTGTTgACACCGAAGATATTTGGAGAATCAATTAAGACCGACGCTACCGGGCAATTTATCTGCGGGAAGCACCTGCGTCTTCGGCAACCTACGAAATTTGATGGAAAAACCTGTCGCTACCTGGAAGCTACACCGGATATTACGATCAAAACCGAATATGCAAGCGGCGATGAAGTTTTGGCCGAAGAATTTGACGTATCGACAAATCGTACAATCGGTGGCGAGAGAAACGATAATCCTGAACGACCAACGTTGAGTCAAATGTACGATCAAAGAATTGGTTGTTACAAGTGTGAAAGATGCAACATCAAATTCCCTCTGGAACGGATGTTGAATCGTCATAAGTTGACTCATGTACGTAAACGCAAAGCAAGGAAACAGCCACAGAACCCAAAACGCAAACATTCGTTggtggaagaaattgaaaaggaGCCGAGCGAGGttgaggaggaagaggaaaagaagaacaaaTATATGTGtagtttttgtaaatttggcTCGAGCAAACTTACGTTGCTGACGAATCATATGAACGAAAAGCACAAGTATGGCAAAATTGAAATCGCGCCGAAATTGAAGTGCCGTCTTTGCAACTTCGTTTGTTCAACTCAGAATACGTTAAAGGCTCATGCCGTGGAGCACGAATCTCTCAAGCAAATAAACTTCAAGTGTAAGCTTTGCAGCTTCGAGTGCAAGCGAGAAAGTACTCTGACTTCTCATACTTCGCGGAAACACCGGCAGGATTCGGAAAATGACAGGGAAATCGTTTACACTTGCAGCAGTTGCGATTACAAAACGCATAAGGAAGACGACCTGGAGTCTCATTTACTTTCTCACAATGCCGAGGACGAAGCGACGTTGAAGTGTCCATCCTGCGACTTCGAATGTAAGACACAGGCGGTTTTGAGAAACCACAACTTTCAGAAACATGGCAAAATTGTTGGCTCGAGAAAGGACATATTTTCTTGTAACGAGTGCGGGCATCAAACGAACAAGAAATCTTCCCTGTACTCTCACATCAACAGGAAACACAAACAGAAAGCGCCGGTTCAAGGGGAGTCTAAGGTATTCTCTTGCAACGAGTGTGACTTCAAAACTGCTAAGAAAGGTTCGATGTATTCCCATATGAGCAAGAAACACCGGTCAAAAGCCGCTCCCGTGACGGAAGAATTCCCACAAATATTTTCCTGCAACGAATGCGGTCATACTACCACCAAAAAGTCCTCCCTATATTCCCACATTAGTAAGAAACACAAACTGAAAAACCGAGTGTCCGATGGCCAGCCTGAGATGTTCTATTGCAACCAGTGCGAGTACAAGAATAAGAATAAGTACGAATTGAAGGTGCACGTGGCCAGAAAACATACggaggatttcaaattttcctgcGAAACCTGTGGCAAGAAGTTCAAAGTGAAGGGGGATTTAACGAATCACATCCGATTTAGCCACAAAGAGCAGCCTGTCATTTGCGACGTGTGCGGGAAGACTTGTCTGAACAGCAACTCCTTGTACGTTCACCAGAAGTTCGCTCATTACAAAGCGAAGTACGAGTGCCAGATTTGCAAGAGACGAATGGTCAGTCAGGAAAATCTTAACGAACACATGCTCAAGCAACacgagaaaaaggaaagcgTGGTTTGCGAGGAATGTGGCAAGACCTTCTCCAGGAACAGCAGGTTGAAGGTTCACATGAGAACCCACACTGGCGATAAGCCCTATTCCTGTACAATCTGTAGCAAAGCCTTCGCTCGTAAAACAGCTTTGAAGCAACATTTGTTGATTCACACCGGGATCAGACCCTACGTATGCGACATATGTGGGAAAGCTTTCACGCAAAAACCTGGTTTAATCAGTCACCGCAAGTCTCATCCCGGATCGCATCCACCACTTCCCAGAGTGCTGATAGATCATATCTTGAACGACGTTATGAACAATTGA
Protein Sequence: MVDVLTPKIFGESIKTDATGQFICGKHLRLRQPTKFDGKTCRYLEATPDITIKTEYASGDEVLAEEFDVSTNRTIGGERNDNPERPTLSQMYDQRIGCYKCERCNIKFPLERMLNRHKLTHVRKRKARKQPQNPKRKHSLVEEIEKEPSEVEEEEEKKNKYMCSFCKFGSSKLTLLTNHMNEKHKYGKIEIAPKLKCRLCNFVCSTQNTLKAHAVEHESLKQINFKCKLCSFECKRESTLTSHTSRKHRQDSENDREIVYTCSSCDYKTHKEDDLESHLLSHNAEDEATLKCPSCDFECKTQAVLRNHNFQKHGKIVGSRKDIFSCNECGHQTNKKSSLYSHINRKHKQKAPVQGESKVFSCNECDFKTAKKGSMYSHMSKKHRSKAAPVTEEFPQIFSCNECGHTTTKKSSLYSHISKKHKLKNRVSDGQPEMFYCNQCEYKNKNKYELKVHVARKHTEDFKFSCETCGKKFKVKGDLTNHIRFSHKEQPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECQICKRRMVSQENLNEHMLKQHEKKESVVCEECGKTFSRNSRLKVHMRTHTGDKPYSCTICSKAFARKTALKQHLLIHTGIRPYVCDICGKAFTQKPGLISHRKSHPGSHPPLPRVLIDHILNDVMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -