Basic Information

Gene Symbol
-
Assembly
GCA_949825005.1
Location
OX463771.1:7875440-7878775[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.6e-09 7.8e-05 23.3 17.6 60 198 107 250 95 258 0.62
2 2 1.2 1.7e+04 -3.9 8.8 90 116 267 293 246 344 0.48

Sequence Information

Coding Sequence
ATGCCCAAACCTCGAGGGACGAAAAAGAAGGATGGAAAAGCAGAGGAAACAATGCTTCAGCCACCGGAGGCTGCCGGTGCTTCGAATCGCAAAGGGCGACGAAGTACCAGCGAAACGGCTAAACCGGCCCTGGTGGGGCTTGCCCACAAATTCCACGATGAGTTAAAAACCGAAGCAGCCGTCGAAATGACTCGGAATCCGGAATTGCTGGCATCCTTGATCGGGCAGCTGCAGCAACTACAGCTGGTTGTCTCGGATGCGAACAAACCGGTCGATCCgaagaaaaaaccaaaaaatgaagCAGCACCTGTGGAAGAGAAAACAATTGCGaatatggaaaaagaaaagaaagtcaAAAGTCAGAAAGAGACTACGGTCCCAAAGAAGAACACCATGGTCCCAAAGGAGTCGAAGAGAAAGGTTTCCAACAAAAATGATATCTCGGACAAGGAGAACTCGAGCAAAGTCGCCAAGGTGCCACAAAAGCTCAATGTCGAGCTGGACGTttcgaggaggaggaggagaagccCTCTCAGCGAAACAATTGGAGAAAGCAACACTCCTGCAAGAGGTACACCGCGAATGCGCAACAAAAGCACCACGAAGCCAGTCGAGGATAAGGGTTGCGGTTGCAAGGGCAACTGTGCCGGTAAAATCTGTGGTTGTGTTAAAAAGGGGATTTTCTGCAACGATCTTAAATGCAAGTGCAGCAGCGATGCGTGCAAGAACCAAGAGCCCAAGATCAAGCAGGAGGGGCAGACCGAAGCTCGAACAGAGACTGAAACTGAGATCGAGACAGAGACTCCGGCTCGAGATCAAGATCACGATCGGGATCAGGATCAGGATCAGGATCAAGATCAGGACCAGACTCAGGTCCAGGCTCAGGCTCAGAGTCGGGTGGTGGAGAATCTCCGAAACGGGAAGCAGACGAGTGTGTTCAGTCCAGATCTGGAAGATAACGTTTTCCAGGAGGAAGAGGATTATAACCAAACCGAACTGTCTCCCATAGGGATTCGTTCTTCGGCGAAGCTGAGTTATGGGACCAGcgaggaagaggaaggaagAACAGGAACGAGTACGGGTGGATCAGTTTCCAGCGAGgaaaaaaacaaCGCTGGAGCAGCAAGAGATACAGCAGAAGCGGACTCGGAATTTAATCCCATGAAACCGAGGAAAGAATTATCTCGAAGCCCGGTTCAAAATTCGACCAACAGAAATCAGACGATGTTACTGGACGTCACCGAGGTGCCTTTGAAGTTACCTATCGATGATGTCGATGAGTCCAAACACGAAGAATTTCCCGTACCAGAAGGATTCGAAGAGCCGGTAATCGATTTGGATAAAATGAAGGAATACATGGTTCAGTGTTCAAAGTGCAGCAGGTCGTTCCTGAAAAATCGGATACAGAAGCACGAAGCCGCGTGTTTGAATAAACGCAAGAAGAGGTAA
Protein Sequence
MPKPRGTKKKDGKAEETMLQPPEAAGASNRKGRRSTSETAKPALVGLAHKFHDELKTEAAVEMTRNPELLASLIGQLQQLQLVVSDANKPVDPKKKPKNEAAPVEEKTIANMEKEKKVKSQKETTVPKKNTMVPKESKRKVSNKNDISDKENSSKVAKVPQKLNVELDVSRRRRRSPLSETIGESNTPARGTPRMRNKSTTKPVEDKGCGCKGNCAGKICGCVKKGIFCNDLKCKCSSDACKNQEPKIKQEGQTEARTETETEIETETPARDQDHDRDQDQDQDQDQDQTQVQAQAQSRVVENLRNGKQTSVFSPDLEDNVFQEEEDYNQTELSPIGIRSSAKLSYGTSEEEEGRTGTSTGGSVSSEEKNNAGAARDTAEADSEFNPMKPRKELSRSPVQNSTNRNQTMLLDVTEVPLKLPIDDVDESKHEEFPVPEGFEEPVIDLDKMKEYMVQCSKCSRSFLKNRIQKHEAACLNKRKKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-